Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_K04
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC12B10.06c |||DUF339 family protein|Schizosaccharomyces pombe... 78 1e-15
SPAC869.05c |||sulfate transporter |Schizosaccharomyces pombe|ch... 31 0.19
SPBC11B10.03 |cog8||Golgi transport complex subunit Cog8 |Schizo... 30 0.25
SPAC22A12.14c |||BSD domain protein, unknown biological role|Sch... 29 0.59
SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16 |Schizosa... 28 1.4
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 27 1.8
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 27 2.4
SPCC4G3.13c |||CUE domain protein Cue1/4 family|Schizosaccharomy... 27 3.1
SPAC2C4.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 3.1
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 25 7.2
SPBC4C3.09 |||acetylglucosaminyltransferase|Schizosaccharomyces ... 25 7.2
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 25 9.5
SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces ... 25 9.5
SPCC126.06 |twf1||twinfilin|Schizosaccharomyces pombe|chr 3|||Ma... 25 9.5
>SPAC12B10.06c |||DUF339 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 139
Score = 78.2 bits (184), Expect = 1e-15
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Frame = +1
Query: 181 LKNVQKVAFSSNTTNNMDTTYMEIPLYDVEK-QQPLEKRKA---RLHYQSRKRGMLENDL 348
L N+ + S+ N M E D+++ + E R A RL YQSRKRG+LE DL
Sbjct: 7 LSNITTLLRSARCMNRMPQLRFEHTKGDLKRVNRSYETRDAMLARLKYQSRKRGILETDL 66
Query: 349 LLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWDIFYWIVEKKPTPKEF-DNEIMNLLKKH 525
LLS FAK ++ + YD+L++ P DWDI YW ++ P+++ +++ L K+
Sbjct: 67 LLSNFAKDQIDKYPVSLLREYDQLLDEP--DWDILYWCSGEREAPEKWKSSQVFKELSKY 124
Query: 526 AKNEDKIALRQPDL 567
+++ LR P+L
Sbjct: 125 CRSQRNHTLRMPEL 138
>SPAC869.05c |||sulfate transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 840
Score = 30.7 bits (66), Expect = 0.19
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 190 VQKVAFSSNTTNNMDTTYMEIPLYDVEKQQPL-EKRKARLHYQSRKRGMLENDLLLSTFA 366
+Q + F + NN+DTT ++ L D+ K+ + H+ + + G ++ L+ + F
Sbjct: 654 LQAIIFDFSAVNNLDTTAVQ-SLIDIRKELEIYANETVEFHFTNIRSGWIKRTLVAAGFG 712
Query: 367 K 369
K
Sbjct: 713 K 713
>SPBC11B10.03 |cog8||Golgi transport complex subunit Cog8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 400
Score = 30.3 bits (65), Expect = 0.25
Identities = 31/139 (22%), Positives = 53/139 (38%)
Frame = +1
Query: 151 TRTLNLSYNALKNVQKVAFSSNTTNNMDTTYMEIPLYDVEKQQPLEKRKARLHYQSRKRG 330
TR L+ LK+++ + + MD ++ + + LEKRKA LH Q K
Sbjct: 7 TREWILTLRLLKDLEDMDSIGDNVTEMDAFVRDLTM---KPYAELEKRKAELHAQKLKLV 63
Query: 331 MLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWDIFYWIVEKKPTPKEFDNEIMN 510
LL + L + Q Y L NS +D+ + P + +
Sbjct: 64 QKRQQLLRDNY--NVLVDYARNQDAFYQLLENS-RHDFKELVLHTNQLYEPVKRSQNFLT 120
Query: 511 LLKKHAKNEDKIALRQPDL 567
+ +H ++ + QP L
Sbjct: 121 SISEHYRDAKLMHQVQPQL 139
>SPAC22A12.14c |||BSD domain protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 29.1 bits (62), Expect = 0.59
Identities = 18/76 (23%), Positives = 40/76 (52%)
Frame = +1
Query: 313 QSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWDIFYWIVEKKPTPKEF 492
+ + ++ +++ F K++ F K+ + + I S +++ +IF W +++ +E
Sbjct: 191 RKQMESLVPSEVSYDDFWKRF---FWHKEVVQPIKAIQSGNDEEEIFSW-GDERSDEEES 246
Query: 493 DNEIMNLLKKHAKNED 540
DNE +N KK + ED
Sbjct: 247 DNEQVNDEKKQSSEED 262
>SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -1
Query: 564 IGLSECNFIFIFSMFFEKIHNFIVK 490
IGLS NF+ FS FFE I +F++K
Sbjct: 288 IGLS--NFVNSFSSFFELISHFLIK 310
>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1062
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/52 (30%), Positives = 31/52 (59%)
Frame = +1
Query: 76 ETILLKRLSLSKIDKNNMNLIKMLHTRTLNLSYNALKNVQKVAFSSNTTNNM 231
ET+ +K++ LSK+ K+++++IKM NL + N+ K S T +++
Sbjct: 33 ETVAVKKVKLSKMLKSDLSVIKMEIDLLKNLDH---PNIVKYRGSYQTNDSL 81
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 27.1 bits (57), Expect = 2.4
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +1
Query: 88 LKRLSLSKIDKNNMNLIK----MLHTRTLNLSYNALKNVQKVAFSSNTTNNMDTTYMEIP 255
L+ L + ++D N + +K M+H R L +S NA+ ++ F T MD P
Sbjct: 756 LQNLMVLQLDNNKLTNLKASQPMIHLRILRISNNAIHQLEVDQFPHLRTLYMDLNRFNRP 815
>SPCC4G3.13c |||CUE domain protein Cue1/4 family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 215
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 154 RTLNLSYNALKNVQKVAFSSNTTNNMDT-TYMEIPLYDVEKQQPLEKRKARLHYQSRKR 327
R+L +YN + SS++T N + ++P E+++ KRK + +RKR
Sbjct: 144 RSLIETYNLSSRISSSDNSSSSTGNEEVRNRSKLPSSKKEREELFRKRKEEMILAARKR 202
>SPAC2C4.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 166
Score = 26.6 bits (56), Expect = 3.1
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Frame = +1
Query: 193 QKVAFSSNTTNNMDTTYMEIPLYDVEKQQPLEKRKARLHYQSRKRG--MLENDL-LLSTF 363
+KV FSS+ N D+TY K Q L K A L Q K+ +L DL L
Sbjct: 42 EKVKFSSSRFYNKDSTY--------SKDQGLAKESAALELQKLKQENVLLRKDLNNLEQI 93
Query: 364 AKKYLNGFNE--KQTMMYDRLINSPSN 438
+ Y G ++ K Y +N N
Sbjct: 94 SDCYAKGMDDIMKHVATYTATMNERMN 120
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 25.4 bits (53), Expect = 7.2
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 91 KRLSLSKIDKNNMNLIKMLHTRTLNLSYNALKNVQKVAFSSNTTNNMDTTYME 249
K L+L +I++ M++IK + L+Y+ K V+K Y+E
Sbjct: 460 KGLTLEEINELYMSVIKPWESGNFKLNYSEQKKVEKEKSRKGGARGESVEYVE 512
>SPBC4C3.09 |||acetylglucosaminyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 376
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -3
Query: 610 RNKFILLTLHFRFNVDRVVGVQFY 539
R+KF+L++L N+ ++G+Q Y
Sbjct: 16 RSKFVLISLILLLNLGLLLGIQIY 39
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 25.0 bits (52), Expect = 9.5
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 259 YDVEKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKY 375
Y+V KQQ + + + ++KRG+ N+ L AKKY
Sbjct: 783 YNVAKQQRAYEEEINRIWNAQKRGLSINN--LEELAKKY 819
>SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1150
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 92 LSKMVSKSNQINTNDHFLIKIPFLL 18
LSK +KS N +D F I+IP ++
Sbjct: 557 LSKKTAKSKVWNLDDFFTIEIPHMM 581
>SPCC126.06 |twf1||twinfilin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 328
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 478 TPKEFDNEIMNLLKKHAKNEDKIALRQPDLH*NE 579
TP+E D + ++K +K ED+ LRQ +L E
Sbjct: 123 TPEELDYQ--QIMKSLSKQEDQSPLRQDELERKE 154
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,609,719
Number of Sequences: 5004
Number of extensions: 56175
Number of successful extensions: 200
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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