Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_K03
(656 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 31 0.11
SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual 30 0.26
SPBP23A10.02 |||conserved fungal protein|Schizosaccharomyces pom... 29 0.45
SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces ... 29 0.45
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 28 1.4
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 27 1.8
SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces pombe... 27 2.4
SPAC6F6.12 |||autophagy associated protein Atg24|Schizosaccharom... 27 3.1
SPAC17H9.04c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 27 3.1
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 27 3.1
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 27 3.1
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 27 3.1
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 26 4.2
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p... 26 5.5
SPBC26H8.02c |sec9||SNAP-25 homologue, t-SNARE component Sec9|Sc... 25 7.3
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 25 7.3
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo... 25 7.3
SPAC9E9.02 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 25 7.3
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 7.3
SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces po... 25 9.6
SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces p... 25 9.6
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 25 9.6
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 31.5 bits (68), Expect = 0.11
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Frame = +2
Query: 239 NMGGNFERAHNMDSLAQRHLSGAISQVEGELGEEGSKTRTGSVYTAANSAGFYGSGNYDL 418
N N N +S+ + LS LG G+ + +++G Y + N
Sbjct: 528 NTSNNNSNTSNNESMVSK-LSSLSGMASSFLGSSGNNNNNNN-----SNSGNYNNNNSGN 581
Query: 419 SNLRGRNFQEGTYLDNAHSSLL--SNAQYSTQAINRNSHYSNSQFSNSNYRNSHRAS 583
+N + + Q + L SS L S+ + Q N N++ + +N NY N++ +S
Sbjct: 582 NNQQHQ--QSSSSLQGLASSFLNSSSGNSNKQNYNNNNNQNYGNNNNQNYNNNNNSS 636
Score = 26.6 bits (56), Expect = 3.1
Identities = 26/126 (20%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
Frame = +2
Query: 254 FERAHNMDSLAQRH-LSGAISQVEGELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLR 430
F+ + + LAQ L+ A G L GS ++++ + N + SN
Sbjct: 474 FQNRNLLTKLAQSGVLTNAAQGSSGGLSAAAVSGLIGSFMGSSSNNSNSSNNNSNTSNNN 533
Query: 431 GRNFQEGTYLDNAHS-SLLSNAQYSTQAINRNSHYSNS-QFSNSNYRNSHRASPSQSQHI 604
+ + S S ++++ + N N++ SNS ++N+N N+++ S +
Sbjct: 534 SNTSNNESMVSKLSSLSGMASSFLGSSGNNNNNNNSNSGNYNNNNSGNNNQQHQQSSSSL 593
Query: 605 SDLQAS 622
L +S
Sbjct: 594 QGLASS 599
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 458 LDNAHSSLLSNAQYSTQAINRNS-HYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGS 631
L SS L ++ + N NS +Y+N+ N+N ++ +S Q S L +S G+
Sbjct: 549 LSGMASSFLGSSGNNNNNNNSNSGNYNNNNSGNNNQQHQQSSSSLQGLASSFLNSSSGN 607
>SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1029
Score = 30.3 bits (65), Expect = 0.26
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 114 LPHYRRWLW--PNLSFIKKKKTFTILEVRRTKVASLDFMVRKEETWGVILNVLTTWIHLL 287
LP + W P+ + + KK + + + + V +++WG I+ V+ T ++ L
Sbjct: 827 LPFFALWFENIPSFTRVHDKKLSLVAILSVISLGAQQVAVAIQDSWGNIMKVMITLLNTL 886
Query: 288 KDI*AARSHKLKE 326
+ AAR+ KE
Sbjct: 887 PEALAARAELEKE 899
>SPBP23A10.02 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 132
Score = 29.5 bits (63), Expect = 0.45
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 467 AHSSLLSNAQYSTQAINRNSHYSNSQFSNSNYRNSHRASPS 589
AH+ + ++ Q S+Q+ N+N SN+Q ++N S + S S
Sbjct: 69 AHARVNNDLQMSSQSANKNDDNSNNQNPSNNKEMSDKESDS 109
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 521 NSHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGS 631
N +SQ +N N NS+ +PS ++ +SD ++ +
Sbjct: 75 NDLQMSSQSANKNDDNSNNQNPSNNKEMSDKESDSAT 111
>SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 325
Score = 29.5 bits (63), Expect = 0.45
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 323 GELGEEGSKTRT-GSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQ 496
G G + + +T G+V +A S YG G Y N + T NA ++ NAQ
Sbjct: 221 GSYGNDNTANKTRGAVSSAGYSGEGYGKGTYATDTTAEANRRAATGTRNARTTAQRNAQ 279
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/65 (24%), Positives = 27/65 (41%)
Frame = +2
Query: 434 RNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFSNSNYRNSHRASPSQSQHISDL 613
R + +Y N +S+ N YS+ N + S ++ R AS QSQ+
Sbjct: 104 RRHDDSSYSSNKYSTG-GNDSYSSGGRNEDYSTSGGSYTTDPSRTDDTASYGQSQYNQSR 162
Query: 614 QASDG 628
+ + G
Sbjct: 163 KTTQG 167
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 515 NRNSHYSNSQFSN-SNYRNSHRASPSQSQHISDLQA 619
NR S + NSQ+S +N++N+ SP+ S + LQA
Sbjct: 234 NRVSSFQNSQYSTLNNFQNNSNQSPN-SNDLQPLQA 268
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 27.5 bits (58), Expect = 1.8
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Frame = +2
Query: 230 QRGNM---GGNFERAHNMDSLAQRHLSGAISQVEGELGEEGSK-TRTGSVYTAANSAGFY 397
QRG+ GGN +R+ N++ +R + + +L ++ S+ + T ++ +N +
Sbjct: 412 QRGSYNREGGNMDRSRNVNYQPKRQQN--FKPLTSDLPQKNSEFSETNAMNQTSNHSHAD 469
Query: 398 GSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFSNSNYRNSHR 577
G Y R + + + D S+ Q A N +S Y N+ + R S
Sbjct: 470 GQRYYRPEQDRSQRLRNPS--DYGRQGRQSS-QSQQPAWNVSSRYQNNSKVQTTSRASEN 526
Query: 578 ASPSQSQH 601
A +++QH
Sbjct: 527 ADTNKTQH 534
>SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 27.1 bits (57), Expect = 2.4
Identities = 26/108 (24%), Positives = 47/108 (43%)
Frame = +2
Query: 326 ELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYST 505
++GE K R S + N + S + D+ LRG + LD + + Y +
Sbjct: 679 QVGESLKKWRLTSRFCLGNLHDWNTSSSVDVGELRGIDKLALVQLDKFQTEI--RELYES 736
Query: 506 QAINRNSHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGSQGLSTI 649
+IN+ H+ N F NS + +S + + +DL S + + T+
Sbjct: 737 YSINKVVHHLN-YFMNS-FLSSTYFDAVKDRLYADLPNSVSRRSVQTV 782
>SPAC6F6.12 |||autophagy associated protein
Atg24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 401
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 264 LTTWIHLLKDI*AARSHKLKESWARRDQKPERV 362
LT + +KD+ + +H LKE RRDQK + V
Sbjct: 253 LTLLLDTIKDV-ESYAHSLKELLKRRDQKQQDV 284
Score = 25.0 bits (52), Expect = 9.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 244 HVSSLRTIKSRLATFVRRTSRIVKVFFFFIKLR 146
HVS L K+ L+ F R ++ + F F+KL+
Sbjct: 36 HVSYLIITKTNLSIFTRAECKVRRRFSDFVKLQ 68
>SPAC17H9.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 604
Score = 26.6 bits (56), Expect = 3.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +2
Query: 419 SNLRGRNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFSNSNYR-NSHRASPSQS 595
SN +F G N S ++N S N N+ S+ Q N N N H +S S
Sbjct: 380 SNTFSPDFPYGNSYGNGSSHFIANYGGSVHHSNENTMQSDLQHQNGNNAVNHHHSSRSFG 439
Query: 596 QHISDLQASD---GSQG 637
++ +A D GS+G
Sbjct: 440 GNV-PFRAGDWKCGSEG 455
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 26.6 bits (56), Expect = 3.1
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 416 LSNLRGRNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFSNSNYRNSHRASPSQS 595
LSNL+ R G YLD++ + L + S + + + S +N + +PS++
Sbjct: 216 LSNLKSRLDLAGEYLDDSIMNDLGDNVGSNSKGSPTTSIPEHKTSINNNKPEDTPTPSEN 275
Query: 596 QHISDLQ 616
H+S Q
Sbjct: 276 VHLSARQ 282
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 413 DLSNLRGRNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFSNSNYRN 568
+++N+ RNFQ G + + SSL +N Q A N ++ +N N+N N
Sbjct: 264 NIANM-ARNFQSGGGMPDL-SSLANNPQLQNLARNFMNNNNNGNTDNNNQGN 313
>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1062
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 461 DNAHSSLLSNAQYSTQAINRNSHYSN--SQFSNSNYRNSHRASPSQSQH 601
DN + + S + ++ H+ + S F N +S +SPS+S+H
Sbjct: 327 DNWDNEFQGTLKISDDVLKKSEHFMDFCSNFKGKNNSSSITSSPSKSRH 375
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 473 SSLLSNAQYSTQAINRNSHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGS 631
SSLLS S + S S Q ++++ +S SPS S S + + GS
Sbjct: 337 SSLLSLLTQSFSTVRSTSSSSTDQLTSASPISSSVISPSVSSPTSSILTNSGS 389
>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 595
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 108 FCLPH-YRRWLWPNLSFIKKKKTFTILEVRRTKVASLDFMVRK 233
FC+P R+ +W +L ++ + T+ T SLD +RK
Sbjct: 169 FCIPSPCRKLVWQSLVSAERNELLTLYATLSTTNNSLDSSIRK 211
>SPBC26H8.02c |sec9||SNAP-25 homologue, t-SNARE component
Sec9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 419
Score = 25.4 bits (53), Expect = 7.3
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 461 DNAHSSLLSNA-QYSTQAINRNSHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGSQG 637
+ ++S+ +NA YS NS+ SNS N+N +++ +S + + S + GS G
Sbjct: 20 EESNSNTATNAPSYSVGGTTANSYSSNSYNDNNNSNSTYGSSNNYGNYGS--SNNYGSYG 77
Query: 638 LS 643
S
Sbjct: 78 AS 79
Score = 25.4 bits (53), Expect = 7.3
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 497 YSTQAINRNSHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGS 631
YS+ + N N++ +++ S++NY N ++ S S+ S+GS
Sbjct: 43 YSSNSYNDNNNSNSTYGSSNNYGNYGSSNNYGSYGASNTYGSNGS 87
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 25.4 bits (53), Expect = 7.3
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +2
Query: 485 SNAQYSTQAINRNSHYSNSQFSNSNYRNSHRASPSQS 595
SN+ YST ++ + H ++ NSN+ + A+ + +
Sbjct: 318 SNSNYSTTRVDNDPHVASYSPQNSNFDHQAAATTNDA 354
>SPBC13G1.08c |ash2||Ash2-trithorax family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 25.4 bits (53), Expect = 7.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 405 PDP*KPAEFAAVYTLPVLVFDPSSPNSPSTCEI 307
P P + ++F V LP+ + SSPN S EI
Sbjct: 285 PPPWRDSDFETVPKLPIFYPNSSSPNFFSLSEI 317
>SPAC9E9.02 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 98
Score = 25.4 bits (53), Expect = 7.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 281 VNPCCEHVQNYPPCFLFAHHKIQTCYLRPTNF*NSESLLFLY 156
+NPC N+ + KI+ L T+F ++E++ FLY
Sbjct: 49 LNPC-----NFSKSLFWLRKKIKNSVLLKTSFDSNETIFFLY 85
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 7.3
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +2
Query: 380 NSAGFYGS-GNYDLSN--LRGRNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFS 550
N++ FYG G+ + SN + +N A+S+L ++ S Y NS S
Sbjct: 255 NTSLFYGVVGHQNGSNGFISPKNLTRDLLNYKANSTLFGGVTIWDTSLAAMS-YDNS--S 311
Query: 551 NSNYRNSHRASPSQSQHISDLQASDGSQGLST 646
+ H+ ++S+H S + D SQGL +
Sbjct: 312 ETFVEAIHKILDTKSKHSSSKSSHDSSQGLES 343
>SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 635
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 207 ASLDFMVRKEETWGVILNVLTTWIH 281
A+L +R+E TWG + + TT IH
Sbjct: 23 ATLPLAIRRELTWGQVNILHTTDIH 47
>SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1033
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = -1
Query: 647 LLITLVSHLKLVGHLYVVTEMEMHDDYFDNSNY*IDYCYNENFYLSL 507
+++ L+ L + LY ++ M++H Y ++ + +NE F LSL
Sbjct: 147 IVVLLLHKLNSLKQLYTMS-MDIHSRYRTEAHSDVTARFNERFILSL 192
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.0 bits (52), Expect = 9.6
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Frame = +2
Query: 350 TRTGSVYTAANSAGFYGSGNYDLSNLRGR-----NFQEGTYLD---NAHSSLLSNAQYST 505
T+T V +A+NS GS ++ R NF E + D N+H S + Y
Sbjct: 264 TQTTQV-SASNSPALSGSSTPSNTSSRSNRQNHGNFSEKRHYDRYGNSHPSYNKYSHYQH 322
Query: 506 QAINRNSHYSNSQFSNSNYRNSHRASPSQSQH 601
NS + ++ + +RNS R +Q +
Sbjct: 323 GFNYNNSGNNRNESGHPRFRNSRRNYNNQGAY 354
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,530,883
Number of Sequences: 5004
Number of extensions: 52138
Number of successful extensions: 197
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -