Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_J03
(656 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 62 5e-10
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 44 2e-04
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 42 7e-04
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 42 7e-04
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 39 0.005
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 36 0.048
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 31 1.4
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 31 1.4
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 31 1.4
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 31 1.4
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 31 1.4
AY061403-1|AAL28951.1| 1486|Drosophila melanogaster LD33266p pro... 29 5.6
AE014296-3600|AAF51764.1| 1486|Drosophila melanogaster CG7158-PA... 29 5.6
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 29 7.3
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 29 7.3
BT030123-1|ABN49262.1| 1211|Drosophila melanogaster IP13783p pro... 29 7.3
AE014296-1508|AAF50376.2| 1211|Drosophila melanogaster CG6511-PA... 29 7.3
AY118382-1|AAM48411.1| 1405|Drosophila melanogaster RE28066p pro... 28 9.7
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 28 9.7
AE014296-1309|AAF50523.1| 1405|Drosophila melanogaster CG7457-PA... 28 9.7
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 62.5 bits (145), Expect = 5e-10
Identities = 37/134 (27%), Positives = 66/134 (49%)
Frame = -3
Query: 594 LGVILDSRLTGSPHCYYISDKCEKILNILRCLSGVWWGAHPFSLKLLYNALIRSILDYGT 415
LG+ L+++ + H + K LNI++CLS + + + +L + A I + L+YG
Sbjct: 740 LGITLNNKYKWNTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKATIIAKLEYGL 799
Query: 414 FILEPCNAVALHKLDIIQSKALRIIAGAMRSSPINALQVECSEAPLHLRRQFLCDRFLFR 235
F+ L+K+ + A+R+ GA RS+PIN L E + PL ++R +
Sbjct: 800 FLYGHAPKSILNKIKTPFNSAIRLALGAYRSTPINNLLYESNTPPLEMKRDLQIAKLSQN 859
Query: 234 AFQVYNHPLYTKLR 193
N P++ L+
Sbjct: 860 LILSKNTPIHKFLK 873
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/94 (30%), Positives = 44/94 (46%)
Frame = -3
Query: 594 LGVILDSRLTGSPHCYYISDKCEKILNILRCLSGVWWGAHPFSLKLLYNALIRSILDYGT 415
LG+ D +L HC + + E NI++ LS + H +L + AL+ S +DYG
Sbjct: 749 LGITFDPKLLFKQHCQTLRKQLETRFNIIKFLSSKYSYIHIKTLIDITRALMLSKIDYGL 808
Query: 414 FILEPCNAVALHKLDIIQSKALRIIAGAMRSSPI 313
I C L KL + A+R A +SP+
Sbjct: 809 PIFGWCAKSHLKKLQVPYHGAVRRAIHAFPTSPV 842
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 41.9 bits (94), Expect = 7e-04
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Frame = -3
Query: 606 EATFLGVILDSRLTGSPHCYYISDKCEKILNILRCLSGVWWGAHPFSLK---LLYNALIR 436
E T+LGV LD RLT H I K + + R L + P SL+ LLYN++++
Sbjct: 735 EVTYLGVHLDRRLTWRKH---IEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLK 791
Query: 435 SILDYGTFILEPCNAVALHKLDIIQSKALRIIAGA 331
I YG+ + + + + QS+ LRII GA
Sbjct: 792 PIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 41.9 bits (94), Expect = 7e-04
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Frame = -3
Query: 606 EATFLGVILDSRLTGSPHCYYISDKCEKILNILRCLSGVWWGAHPFSLK---LLYNALIR 436
E T+LGV LD RLT H I K + + R L + P SL+ LLYN++++
Sbjct: 735 EVTYLGVHLDRRLTWRKH---IEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLK 791
Query: 435 SILDYGTFILEPCNAVALHKLDIIQSKALRIIAGA 331
I YG+ + + + + QS+ LRII GA
Sbjct: 792 PIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 39.1 bits (87), Expect = 0.005
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = -3
Query: 606 EATFLGVILDSRLTGSPHCYYISDKCEKILNILRCLSGVWWGAHPFSLK---LLYNALIR 436
E T+LGV LD RLT H + + N L L P SL LLYN++++
Sbjct: 737 EVTYLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLIN---SGSPLSLDHKVLLYNSILK 793
Query: 435 SILDYGTFILEPCNAVALHKLDIIQSKALRIIAGA 331
I YG+ + + + + QSK LR I GA
Sbjct: 794 PIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGA 828
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 35.9 bits (79), Expect = 0.048
Identities = 24/90 (26%), Positives = 43/90 (47%)
Frame = -3
Query: 609 SEATFLGVILDSRLTGSPHCYYISDKCEKILNILRCLSGVWWGAHPFSLKLLYNALIRSI 430
S+A +LG+ LD RLT PH + +C + + LR L + + +Y + I
Sbjct: 749 SQAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPI 808
Query: 429 LDYGTFILEPCNAVALHKLDIIQSKALRII 340
YG I +++ ++Q++A+R I
Sbjct: 809 WLYGIQIWGIAAKSNYNRIQVLQNRAMRAI 838
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = -3
Query: 612 KSEATFLGVILDSRLTGSPH 553
+S+ ++LGVILDS+LT SPH
Sbjct: 678 ESKQSYLGVILDSKLTLSPH 697
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = -3
Query: 612 KSEATFLGVILDSRLTGSPH 553
+S+ ++LGVILDS+LT SPH
Sbjct: 794 ESKQSYLGVILDSKLTLSPH 813
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = -3
Query: 612 KSEATFLGVILDSRLTGSPH 553
+S+ ++LGVILDS+LT SPH
Sbjct: 794 ESKQSYLGVILDSKLTLSPH 813
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = -3
Query: 612 KSEATFLGVILDSRLTGSPH 553
+S+ ++LGVILDS+LT SPH
Sbjct: 756 ESKQSYLGVILDSKLTLSPH 775
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = -3
Query: 612 KSEATFLGVILDSRLTGSPH 553
+S+ ++LGVILDS+LT SPH
Sbjct: 794 ESKQSYLGVILDSKLTLSPH 813
>AY061403-1|AAL28951.1| 1486|Drosophila melanogaster LD33266p protein.
Length = 1486
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 246 FLFRAFQVYNHPLYTKLRSLLECMDYPYWAHKSPPCLIVSLQ 121
+L +AF+ +HPLY + C Y Y K P I++ Q
Sbjct: 1227 YLEQAFKDRHHPLYVLNERIANCFHYSYGYWKVKPTPILAKQ 1268
>AE014296-3600|AAF51764.1| 1486|Drosophila melanogaster CG7158-PA
protein.
Length = 1486
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 246 FLFRAFQVYNHPLYTKLRSLLECMDYPYWAHKSPPCLIVSLQ 121
+L +AF+ +HPLY + C Y Y K P I++ Q
Sbjct: 1227 YLEQAFKDRHHPLYVLNERIANCFHYSYGYWKVKPTPILAKQ 1268
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = -3
Query: 615 LKSEATFLGVILDSRLTGSPH 553
++S+ ++LGVILDS+LT S H
Sbjct: 8 IESKQSYLGVILDSKLTLSSH 28
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = -3
Query: 615 LKSEATFLGVILDSRLTGSPH 553
++S+ ++LGVILDS+LT S H
Sbjct: 793 IESKQSYLGVILDSKLTLSSH 813
>BT030123-1|ABN49262.1| 1211|Drosophila melanogaster IP13783p
protein.
Length = 1211
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = -3
Query: 408 LEPCNAVALHKLDIIQSKALRIIAGAMRSSPINALQVECS 289
+EPC ++ H+LD+++S+A +I + P + ++EC+
Sbjct: 8 IEPCRSIGPHELDVVKSQA--VIKLSPVPVPAHFKRLECN 45
>AE014296-1508|AAF50376.2| 1211|Drosophila melanogaster CG6511-PA
protein.
Length = 1211
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = -3
Query: 408 LEPCNAVALHKLDIIQSKALRIIAGAMRSSPINALQVECS 289
+EPC ++ H+LD+++S+A +I + P + ++EC+
Sbjct: 8 IEPCRSIGPHELDVVKSQA--VIKLSPVPVPAHFKRLECN 45
>AY118382-1|AAM48411.1| 1405|Drosophila melanogaster RE28066p protein.
Length = 1405
Score = 28.3 bits (60), Expect = 9.7
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = -3
Query: 501 LSGVWWGAH---PFSLKLLYNALIRSILDYGTFIL--EPCNAVALHKLDIIQSKALRIIA 337
LSG+W A P LL+ A + ++LD + E C +A ++Q KALR+
Sbjct: 1065 LSGLWMRAEKTEPIFKALLHQARL-TVLDLSCNFIGNEGCQQLAKSLPTLLQLKALRLQC 1123
Query: 336 GAMRSSPINAL 304
A+ S + AL
Sbjct: 1124 NAIGSHGLEAL 1134
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 28.3 bits (60), Expect = 9.7
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = -3
Query: 603 ATFLGVILDSRLTGSPHCYYISDKCE-KILNILRCLSGVWWGAHPFSLKL-LYNALIRSI 430
A +LGV+LD RLT S H I + K+ LS S KL +Y ++
Sbjct: 745 AKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSS--RSKLSLSNKLTIYKQILAPN 802
Query: 429 LDYGTFILEPCNAVALHKLDIIQSKALRIIAG 334
YG I + ++ IQ+K R+I G
Sbjct: 803 WKYGCQIWGLACDSHIKRIQAIQNKVARLITG 834
>AE014296-1309|AAF50523.1| 1405|Drosophila melanogaster CG7457-PA
protein.
Length = 1405
Score = 28.3 bits (60), Expect = 9.7
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = -3
Query: 501 LSGVWWGAH---PFSLKLLYNALIRSILDYGTFIL--EPCNAVALHKLDIIQSKALRIIA 337
LSG+W A P LL+ A + ++LD + E C +A ++Q KALR+
Sbjct: 1065 LSGLWMRAEKTEPIFKALLHQARL-TVLDLSCNFIGNEGCQQLAKSLPTLLQLKALRLQC 1123
Query: 336 GAMRSSPINAL 304
A+ S + AL
Sbjct: 1124 NAIGSHGLEAL 1134
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,737,928
Number of Sequences: 53049
Number of extensions: 620733
Number of successful extensions: 1291
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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