Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_I08
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64598-12|AAX88835.1| 408|Caenorhabditis elegans Choline kinase... 68 5e-12
U64598-11|AAK39220.1| 429|Caenorhabditis elegans Choline kinase... 68 5e-12
Z82259-2|CAB05129.1| 474|Caenorhabditis elegans Hypothetical pr... 62 4e-10
AF067937-2|AAF99916.1| 381|Caenorhabditis elegans Choline kinas... 54 9e-08
Z34533-7|CAA84301.2| 369|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z34533-6|CAA84300.2| 371|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AY158691-1|AAN41643.1| 369|Caenorhabditis elegans choline kinas... 42 3e-04
AY158690-1|AAN41642.1| 371|Caenorhabditis elegans choline kinas... 42 3e-04
Z34533-9|CAA84303.2| 368|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z30973-5|CAA83224.2| 368|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z66521-7|CAA91401.2| 387|Caenorhabditis elegans Hypothetical pr... 31 0.70
X98132-1|CAA66831.1| 387|Caenorhabditis elegans N-acetyllactosa... 31 0.70
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 29 2.1
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 29 2.1
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 29 2.1
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 29 2.1
U13019-13|AAC24450.1| 336|Caenorhabditis elegans Serpentine rec... 28 5.0
AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen pro... 28 5.0
Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical p... 27 8.7
Z49967-10|CAA90254.1| 553|Caenorhabditis elegans Hypothetical p... 27 8.7
AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical ... 27 8.7
AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical ... 27 8.7
>U64598-12|AAX88835.1| 408|Caenorhabditis elegans Choline kinase a
protein 2, isoformb protein.
Length = 408
Score = 68.1 bits (159), Expect = 5e-12
Identities = 33/59 (55%), Positives = 43/59 (72%)
Frame = +3
Query: 471 EPKKVLLXIYGQVHGERAMDAIVTESVIFTLLSEXXLGPKLHGVFSGGKIXKFIPAKPL 647
EP KVLL +Y E +V ESVIFTLLSE LGPKL+G+FSGG++ ++IP++PL
Sbjct: 83 EPNKVLLRVYFNPETE---SHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSRPL 138
Score = 47.6 bits (108), Expect = 8e-06
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Frame = +3
Query: 204 TEAEMREVAARICRNYLHGAWKSVDPTELEFRRISGGLSNFLYYVALPE-------DPSK 362
T E++E A +C +L GAWK+V L RI GG+SN L+ L E +P+K
Sbjct: 27 TIPELKERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNK 86
Query: 363 LCTFTKRESSPETELETVASKLV 431
+ + +PETE VA ++
Sbjct: 87 V--LLRVYFNPETESHLVAESVI 107
>U64598-11|AAK39220.1| 429|Caenorhabditis elegans Choline kinase a
protein 2, isoforma protein.
Length = 429
Score = 68.1 bits (159), Expect = 5e-12
Identities = 33/59 (55%), Positives = 43/59 (72%)
Frame = +3
Query: 471 EPKKVLLXIYGQVHGERAMDAIVTESVIFTLLSEXXLGPKLHGVFSGGKIXKFIPAKPL 647
EP KVLL +Y E +V ESVIFTLLSE LGPKL+G+FSGG++ ++IP++PL
Sbjct: 104 EPNKVLLRVYFNPETE---SHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSRPL 159
Score = 47.6 bits (108), Expect = 8e-06
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Frame = +3
Query: 204 TEAEMREVAARICRNYLHGAWKSVDPTELEFRRISGGLSNFLYYVALPE-------DPSK 362
T E++E A +C +L GAWK+V L RI GG+SN L+ L E +P+K
Sbjct: 48 TIPELKERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNK 107
Query: 363 LCTFTKRESSPETELETVASKLV 431
+ + +PETE VA ++
Sbjct: 108 V--LLRVYFNPETESHLVAESVI 128
>Z82259-2|CAB05129.1| 474|Caenorhabditis elegans Hypothetical
protein C28D4.2 protein.
Length = 474
Score = 61.7 bits (143), Expect = 4e-10
Identities = 30/59 (50%), Positives = 43/59 (72%)
Frame = +3
Query: 471 EPKKVLLXIYGQVHGERAMDAIVTESVIFTLLSEXXLGPKLHGVFSGGKIXKFIPAKPL 647
EP+K LL +VH + +D +++ESV+FTLLSE LGPK+ GVF GG+ +FIP++ L
Sbjct: 140 EPEKALL----RVHCQSDIDQLLSESVVFTLLSERNLGPKMLGVFPGGRFEQFIPSRAL 194
Score = 44.0 bits (99), Expect = 9e-05
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +3
Query: 237 ICRNYLHGAWKSVDPTELEFRRISGGLSNFLYYVALP 347
+C YL GAW+ V E R I+GG+SN L+ V LP
Sbjct: 95 LCAKYLGGAWRKVKIEEFRIRAITGGMSNLLFLVELP 131
>AF067937-2|AAF99916.1| 381|Caenorhabditis elegans Choline kinase b
protein 4 protein.
Length = 381
Score = 54.0 bits (124), Expect = 9e-08
Identities = 28/83 (33%), Positives = 49/83 (59%)
Frame = +3
Query: 399 TELETVASKLVKKSMARSNSFSIEEPKKVLLXIYGQVHGERAMDAIVTESVIFTLLSEXX 578
T++ S ++ + + S S + P L+ I+ Q A + TE+V+F++LSE
Sbjct: 46 TQITGGQSNILYLATSASTKLSPDTPSCFLIRIHRQ-----APSQVFTETVVFSVLSERG 100
Query: 579 LGPKLHGVFSGGKIXKFIPAKPL 647
LGPKL+G F GG++ +F+P++ L
Sbjct: 101 LGPKLYGFFPGGRLEEFLPSRTL 123
Score = 34.7 bits (76), Expect = 0.057
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +3
Query: 246 NYLHGAWKSVDPTELEFRRISGGLSNFLYYVA------LPEDPSKLCTFTKRESSPETEL 407
+YL G W V+ +E+ +I+GG SN LY P+ PS R++ +
Sbjct: 29 DYLRGGWALVEKSEVTVTQITGGQSNILYLATSASTKLSPDTPSCFLIRIHRQAPSQVFT 88
Query: 408 ETVASKLVKK 437
ETV ++ +
Sbjct: 89 ETVVFSVLSE 98
>Z34533-7|CAA84301.2| 369|Caenorhabditis elegans Hypothetical
protein B0285.9 protein.
Length = 369
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +3
Query: 534 IVTESVIFTLLSEXXLGPKLHGVFSGGKIXKFIPAK 641
+ T++V + SE LGPKL+G F GG++ +F+P+K
Sbjct: 79 VFTDTVNLAIFSERGLGPKLYGFFEGGRMEEFLPSK 114
>Z34533-6|CAA84300.2| 371|Caenorhabditis elegans Hypothetical
protein B0285.8 protein.
Length = 371
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +3
Query: 534 IVTESVIFTLLSEXXLGPKLHGVFSGGKIXKFIPAKPL 647
+ ++V F + SE LGPKL+G F GG++ +F+P++ L
Sbjct: 79 VFMDTVNFAIFSERGLGPKLYGFFDGGRMEEFLPSRTL 116
>AY158691-1|AAN41643.1| 369|Caenorhabditis elegans choline kinase
CKB-2 protein.
Length = 369
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +3
Query: 534 IVTESVIFTLLSEXXLGPKLHGVFSGGKIXKFIPAK 641
+ T++V + SE LGPKL+G F GG++ +F+P+K
Sbjct: 79 VFTDTVNLAIFSERGLGPKLYGFFEGGRMEEFLPSK 114
>AY158690-1|AAN41642.1| 371|Caenorhabditis elegans choline kinase
CKB-1 protein.
Length = 371
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +3
Query: 534 IVTESVIFTLLSEXXLGPKLHGVFSGGKIXKFIPAKPL 647
+ ++V F + SE LGPKL+G F GG++ +F+P++ L
Sbjct: 79 VFMDTVNFAIFSERGLGPKLYGFFDGGRMEEFLPSRTL 116
>Z34533-9|CAA84303.2| 368|Caenorhabditis elegans Hypothetical
protein B0285.10 protein.
Length = 368
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 540 TESVIFTLLSEXXLGPKLHGVFSGGKIXKFIPAKPL 647
T+ V F + SE LGPKL+G F G++ +F+P+ L
Sbjct: 81 TDIVNFAIFSERGLGPKLYGFFEEGRMEEFLPSVTL 116
>Z30973-5|CAA83224.2| 368|Caenorhabditis elegans Hypothetical
protein B0285.10 protein.
Length = 368
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 540 TESVIFTLLSEXXLGPKLHGVFSGGKIXKFIPAKPL 647
T+ V F + SE LGPKL+G F G++ +F+P+ L
Sbjct: 81 TDIVNFAIFSERGLGPKLYGFFEEGRMEEFLPSVTL 116
>Z66521-7|CAA91401.2| 387|Caenorhabditis elegans Hypothetical
protein W02B12.11 protein.
Length = 387
Score = 31.1 bits (67), Expect = 0.70
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Frame = +3
Query: 108 YSIKRLLMNVRKTYKIFLELNRNSCA--KLQMCGTEAEMREVAARICRNYLHGAWKSV-- 275
+S KRL++ V + I++ L RNS + ++ TE ++R V + ++ G +
Sbjct: 11 FSPKRLIIFVAASTLIYVMLLRNSTLNDERRIAATEEQVRSVNVNVQQSKNSGVAERTHD 70
Query: 276 --DPTELEFRRISGGLSNFLYYVALPEDPSKL 365
DP ELE R + N V P+ P K+
Sbjct: 71 IKDPVELEIARQTLTFLNMEEAVTKPKPPVKI 102
>X98132-1|CAA66831.1| 387|Caenorhabditis elegans
N-acetyllactosamine synthase protein.
Length = 387
Score = 31.1 bits (67), Expect = 0.70
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Frame = +3
Query: 108 YSIKRLLMNVRKTYKIFLELNRNSCA--KLQMCGTEAEMREVAARICRNYLHGAWKSV-- 275
+S KRL++ V + I++ L RNS + ++ TE ++R V + ++ G +
Sbjct: 11 FSPKRLIIFVAASTLIYVMLLRNSTLNDERRIAATEEQVRSVNVNVQQSKNSGVAERTHD 70
Query: 276 --DPTELEFRRISGGLSNFLYYVALPEDPSKL 365
DP ELE R + N V P+ P K+
Sbjct: 71 IKDPVELEIARQTLTFLNMEEAVTKPKPPVKI 102
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/77 (25%), Positives = 39/77 (50%)
Frame = +3
Query: 9 RLFGSWNVTNKISASSNFVLLYFSSYQKILNMFYSIKRLLMNVRKTYKIFLELNRNSCAK 188
RL+GSW+ +S LL ++ +K++ +F +++L +K + EL + K
Sbjct: 277 RLYGSWDAQLSLSNLETIRLLGVNNNRKLIEIFEENEQVLK--QKVSALTEELKKE---K 331
Query: 189 LQMCGTEAEMREVAARI 239
L GT + ++E+ I
Sbjct: 332 LAHAGTRSALKELTNEI 348
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/77 (25%), Positives = 39/77 (50%)
Frame = +3
Query: 9 RLFGSWNVTNKISASSNFVLLYFSSYQKILNMFYSIKRLLMNVRKTYKIFLELNRNSCAK 188
RL+GSW+ +S LL ++ +K++ +F +++L +K + EL + K
Sbjct: 314 RLYGSWDAQLSLSNLETIRLLGVNNNRKLIEIFEENEQVLK--QKVSALTEELKKE---K 368
Query: 189 LQMCGTEAEMREVAARI 239
L GT + ++E+ I
Sbjct: 369 LAHAGTRSALKELTNEI 385
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/77 (25%), Positives = 39/77 (50%)
Frame = +3
Query: 9 RLFGSWNVTNKISASSNFVLLYFSSYQKILNMFYSIKRLLMNVRKTYKIFLELNRNSCAK 188
RL+GSW+ +S LL ++ +K++ +F +++L +K + EL + K
Sbjct: 314 RLYGSWDAQLSLSNLETIRLLGVNNNRKLIEIFEENEQVLK--QKVSALTEELKKE---K 368
Query: 189 LQMCGTEAEMREVAARI 239
L GT + ++E+ I
Sbjct: 369 LAHAGTRSALKELTNEI 385
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/77 (25%), Positives = 39/77 (50%)
Frame = +3
Query: 9 RLFGSWNVTNKISASSNFVLLYFSSYQKILNMFYSIKRLLMNVRKTYKIFLELNRNSCAK 188
RL+GSW+ +S LL ++ +K++ +F +++L +K + EL + K
Sbjct: 314 RLYGSWDAQLSLSNLETIRLLGVNNNRKLIEIFEENEQVLK--QKVSALTEELKKE---K 368
Query: 189 LQMCGTEAEMREVAARI 239
L GT + ++E+ I
Sbjct: 369 LAHAGTRSALKELTNEI 385
>U13019-13|AAC24450.1| 336|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 9 protein.
Length = 336
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 72 YFSSYQKILNMFYSIKRLLMNVRKTYKIFLELNRNS 179
+F S+ ++N++Y + L + +IFL LNR S
Sbjct: 101 FFQSHSLLMNIYYPLLNYLHCAQPLIQIFLTLNRMS 136
>AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen
protein 71 protein.
Length = 371
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/61 (29%), Positives = 24/61 (39%)
Frame = +2
Query: 413 GGQ*ASQEIDGQIEFFQHRGTKEGIAXDIRXGPRREGHGRDRDGICHIHFALRXXAGPEA 592
GG A+ E+ G + K +A + GP G D +G CH L GP
Sbjct: 124 GGDAAAAEVKGNSPAAAYED-KPFVAVGVEEGPHTATTGSDSEGTCH-DCCLPGPPGPPG 181
Query: 593 P 595
P
Sbjct: 182 P 182
>Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 276 DPTELEFRRISGGLSNFLYYVALPEDPSKLCTFTKRES-SPETELETVASKLV 431
+P E+E R+SG S+ +Y E S L ++ E+ +P + +S+ V
Sbjct: 68 NPDEIEVSRVSGRDSSLAFYTTAHETSSMLSRDSRDETLTPNEHIHQASSRRV 120
>Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 276 DPTELEFRRISGGLSNFLYYVALPEDPSKLCTFTKRES-SPETELETVASKLV 431
+P E+E R+SG S+ +Y E S L ++ E+ +P + +S+ V
Sbjct: 68 NPDEIEVSRVSGRDSSLAFYTTAHETSSMLSRDSRDETLTPNEHIHQASSRRV 120
>Z49967-10|CAA90254.1| 553|Caenorhabditis elegans Hypothetical
protein F54C9.8 protein.
Length = 553
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 158 FGVESEQLCE-TANVRHGSGNARSRRPNLQELPAWSVEERG 277
F V +E + TAN GN +S + + LPAW+V+ G
Sbjct: 96 FSVGNESFADFTANNTSFVGNVQSNVRSTRLLPAWAVDNSG 136
>AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 276 DPTELEFRRISGGLSNFLYYVALPEDPSKLCTFTKRES-SPETELETVASKLV 431
+P E+E R+SG S+ +Y E S L ++ E+ +P + +S+ V
Sbjct: 68 NPDEIEVSRVSGRDSSLAFYTTAHETSSMLSRDSRDETLTPNEHIHQASSRRV 120
>AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 276 DPTELEFRRISGGLSNFLYYVALPEDPSKLCTFTKRES-SPETELETVASKLV 431
+P E+E R+SG S+ +Y E S L ++ E+ +P + +S+ V
Sbjct: 68 NPDEIEVSRVSGRDSSLAFYTTAHETSSMLSRDSRDETLTPNEHIHQASSRRV 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,521,881
Number of Sequences: 27780
Number of extensions: 255058
Number of successful extensions: 774
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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