Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_H13
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory... 103 1e-22
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 36 0.025
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 33 0.18
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 31 0.55
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 31 0.72
X56213-1|CAA39670.1| 1651|Caenorhabditis elegans vitellogenin pr... 28 5.1
U41109-17|AAO12426.1| 726|Caenorhabditis elegans Hypothetical p... 28 5.1
U41109-15|AAZ91354.1| 819|Caenorhabditis elegans Hypothetical p... 28 5.1
U41109-14|AAO12423.1| 840|Caenorhabditis elegans Hypothetical p... 28 5.1
AF047659-3|AAC04423.2| 1650|Caenorhabditis elegans Vitellogenin ... 28 5.1
AF047659-2|AAQ91901.1| 1651|Caenorhabditis elegans Vitellogenin ... 28 5.1
Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical pr... 28 6.8
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 27 8.9
>U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory
abnormality protein14 protein.
Length = 439
Score = 103 bits (247), Expect = 1e-22
Identities = 49/106 (46%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Frame = +3
Query: 225 RASSEKVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYV 404
++ SE ++GKAL +PR +YYI +KVGR++ D + FDF A+K L N+L L L Y+
Sbjct: 139 QSRSESILGKALSKIPRKAYYISTKVGRFELDYARTFDFRADKILESLTNSLKRLQLTYI 198
Query: 405 DL--IQVHDITFAPDTSVVLKETLPVLEQAVRDGKARFIGIADYDI 536
D+ +Q+HD FAP+ S+VL ETL LE A GK R IG+ Y +
Sbjct: 199 DICYVQIHDADFAPNESIVLYETLQALEMAKSSGKIRHIGLTGYPL 244
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/60 (31%), Positives = 38/60 (63%)
Frame = +2
Query: 53 MRYNELGTTGIKVSHISVGSAAFSNIYGKYDEKRSLELIKESLNLGINYLETGPWYGQGQ 232
M Y ++ T I++S I G+AA ++G ++ +++++ ++ GINY++TG WY Q +
Sbjct: 83 MNYRQIPGTDIRMSKIGFGAAAIGGMFGNVEDS-IIKIVETAIKQGINYIDTGYWYSQSR 141
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 42.3 bits (95), Expect = 3e-04
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Frame = +3
Query: 264 GVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYVDLIQVH---DITF 434
G+ R+ +I +KV +++T+ E+T L N+L+ L DYVDL+ +H D
Sbjct: 75 GLTREDVFITTKVRTLNENTV-------EETEKQLANSLATLQTDYVDLLLIHYPRDRDT 127
Query: 435 APDTSVVL-----KETLPVLEQAVRDGKARFIGIADYDIDLMKEVXKESEVKISTILSYS 599
D + K LE+A G+ R IG+++Y++ + E+ + + KI +L+
Sbjct: 128 GNDDDYEINKSRRKIVWQTLEKAKESGRVRSIGVSNYEVYHLVEMFEYA--KIRPVLNQY 185
Query: 600 KSTPFXNR 623
+ P+ R
Sbjct: 186 EYQPYLTR 193
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/80 (25%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Frame = +3
Query: 348 EKTAAGLDNTLSLLGLDYVDLIQVHDITFA-----PDTSVVLKETLPVLEQAVRDGKARF 512
+K ++ +LS L ++Y+DL+ +H + P + E+ V+ + + +GK R
Sbjct: 86 KKARESIEESLSNLKVEYLDLLLIHWPGSSLKSENPANKKLRVESWNVMCEMMAEGKLRS 145
Query: 513 IGIADYDIDLMKEVXKESEV 572
+G+++++I ++E+ K+S V
Sbjct: 146 VGVSNFEICHLEELKKDSNV 165
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 33.1 bits (72), Expect = 0.18
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Frame = +3
Query: 321 TLKMFDFSAEKTAA----GLDNTLSLLGLDYVDLIQVH------DITFAPDTSVVLKETL 470
T K+F +S++ A ++ +L LL Y+DL+ VH + + K+T
Sbjct: 73 TSKVFPYSSKNAAELIRKDVNESLELLDRKYLDLVLVHYPRPLDTEDLNENNKMYRKDTW 132
Query: 471 PVLEQAVRDGKARFIGIADYDIDLMKEV 554
LE+ +GK R IG+++Y+ ++E+
Sbjct: 133 IALEKLHAEGKIRSIGVSNYEPHHIEEM 160
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 32.7 bits (71), Expect = 0.24
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 19/133 (14%)
Frame = +3
Query: 234 SEKVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSA---EKTAAGLDNTLSLLGLDYV 404
+E +IGK L Y K+ R D F+A E +++ L L L+Y+
Sbjct: 53 NEHIIGKVL-----HEYISSGKLKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYI 107
Query: 405 DLIQVH--------DITFAP--------DTSVVLKETLPVLEQAVRDGKARFIGIADYDI 536
DL +H + +FAP T + +T LE+ ++GK + +G++++
Sbjct: 108 DLYLIHCPFPFKHQEGSFAPLMENGELAVTEIAHIDTWRALEKLYKEGKLKALGVSNFSC 167
Query: 537 DLMKEVXKESEVK 575
+ ++ + +EVK
Sbjct: 168 NQLQALYDAAEVK 180
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 31.5 bits (68), Expect = 0.55
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = +3
Query: 321 TLKMFDFSAEKTAAGLDNTLSLLGLDYVDLIQVH-DITFAPDTSVVLKETLPV-----LE 482
T KM + E +D +LSLL Y+D+ +H +F + +TL + L
Sbjct: 74 TTKMHPNTVENVKKLVDESLSLLKTSYIDMYLIHYPKSFDYGDQDPMNKTLRIATWNDLW 133
Query: 483 QAVRDGKARFIGIADYDIDLMKEV 554
+ GK R +G++ ++I ++E+
Sbjct: 134 ECKNAGKIRSVGVSSFEIRHLEEL 157
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 31.1 bits (67), Expect = 0.72
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Frame = +3
Query: 366 LDNTLSLLGLDYVDLIQVH------DITFAPDTSVVLKETLPVLEQAVRDGKARFIGIAD 527
++ +L L DY+D+ VH + + K VLE+A GK R IG+++
Sbjct: 102 VEESLQSLQTDYIDMYLVHYPKPNDSDNDDVNNAEYRKIAYEVLEEAKAAGKVRSIGVSN 161
Query: 528 YDIDLMKEVXKESEV 572
Y+I ++E+ ++V
Sbjct: 162 YEIVHLEELKTYAKV 176
>X56213-1|CAA39670.1| 1651|Caenorhabditis elegans vitellogenin
protein.
Length = 1651
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 125 NIYGKYDEKRSLELIKESLNLGINYLETGPWYGQGQLRKGHWEGFSW 265
N+Y Y +++ E + + N G YLE P Y + + R+ + F W
Sbjct: 1059 NLYNNYKMEKNYEKVYKKHN-GRRYLEAEPEYDEEEHREQITKKFEW 1104
>U41109-17|AAO12426.1| 726|Caenorhabditis elegans Hypothetical
protein F52E1.13d protein.
Length = 726
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 105 LEVPLSAISMGNMTRKEAWSSLKKA*ISVSTIWKPDPGTVRASSEKVIGKALVG 266
L+ P ++G + A S K ++S K GTV + +EKV+G A+ G
Sbjct: 327 LDTPSEGKNIGRFSPNAARRSFGKLGRTLSARAKSIQGTVTSGAEKVVGTAVQG 380
>U41109-15|AAZ91354.1| 819|Caenorhabditis elegans Hypothetical
protein F52E1.13c protein.
Length = 819
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 105 LEVPLSAISMGNMTRKEAWSSLKKA*ISVSTIWKPDPGTVRASSEKVIGKALVG 266
L+ P ++G + A S K ++S K GTV + +EKV+G A+ G
Sbjct: 306 LDTPSEGKNIGRFSPNAARRSFGKLGRTLSARAKSIQGTVTSGAEKVVGTAVQG 359
>U41109-14|AAO12423.1| 840|Caenorhabditis elegans Hypothetical
protein F52E1.13a protein.
Length = 840
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 105 LEVPLSAISMGNMTRKEAWSSLKKA*ISVSTIWKPDPGTVRASSEKVIGKALVG 266
L+ P ++G + A S K ++S K GTV + +EKV+G A+ G
Sbjct: 327 LDTPSEGKNIGRFSPNAARRSFGKLGRTLSARAKSIQGTVTSGAEKVVGTAVQG 380
>AF047659-3|AAC04423.2| 1650|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 6, isoform
a protein.
Length = 1650
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 125 NIYGKYDEKRSLELIKESLNLGINYLETGPWYGQGQLRKGHWEGFSW 265
N+Y Y +++ E + + N G YLE P Y + + R+ + F W
Sbjct: 1059 NLYNNYKMEKNYEKVYKKHN-GRRYLEAEPEYDEEEHREQITKKFEW 1104
>AF047659-2|AAQ91901.1| 1651|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 6, isoform
c protein.
Length = 1651
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 125 NIYGKYDEKRSLELIKESLNLGINYLETGPWYGQGQLRKGHWEGFSW 265
N+Y Y +++ E + + N G YLE P Y + + R+ + F W
Sbjct: 1059 NLYNNYKMEKNYEKVYKKHN-GRRYLEAEPEYDEEEHREQITKKFEW 1104
>Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical
protein C38C10.5b protein.
Length = 1374
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +3
Query: 426 ITFAPDTSVVLKETLPVLEQAVRDGKARFIGIADYDIDLM--KEVXKESEVKIS 581
+TF+PD V+K + +LE V +A+FI + D +++ M KE + ++ S
Sbjct: 481 VTFSPDEKAVVKTHIQLLE--VVGDRAQFIQLEDDEMNGMHVKEAINQGTMRFS 532
>Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical
protein C38C10.5a protein.
Length = 1368
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +3
Query: 426 ITFAPDTSVVLKETLPVLEQAVRDGKARFIGIADYDIDLM--KEVXKESEVKIS 581
+TF+PD V+K + +LE V +A+FI + D +++ M KE + ++ S
Sbjct: 481 VTFSPDEKAVVKTHIQLLE--VVGDRAQFIQLEDDEMNGMHVKEAINQGTMRFS 532
>Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical
protein C38C10.5b protein.
Length = 1374
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +3
Query: 426 ITFAPDTSVVLKETLPVLEQAVRDGKARFIGIADYDIDLM--KEVXKESEVKIS 581
+TF+PD V+K + +LE V +A+FI + D +++ M KE + ++ S
Sbjct: 481 VTFSPDEKAVVKTHIQLLE--VVGDRAQFIQLEDDEMNGMHVKEAINQGTMRFS 532
>Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical
protein C38C10.5a protein.
Length = 1368
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +3
Query: 426 ITFAPDTSVVLKETLPVLEQAVRDGKARFIGIADYDIDLM--KEVXKESEVKIS 581
+TF+PD V+K + +LE V +A+FI + D +++ M KE + ++ S
Sbjct: 481 VTFSPDEKAVVKTHIQLLE--VVGDRAQFIQLEDDEMNGMHVKEAINQGTMRFS 532
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 172 FNELQASFLVIFPIDIAESGTSNTNVRNFDTGCTEL 65
FN+L++ +F +D E TSN + DT TEL
Sbjct: 222 FNDLESYCCTLFFVDRIECTTSNDLFSSDDTSLTEL 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,013,442
Number of Sequences: 27780
Number of extensions: 280786
Number of successful extensions: 801
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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