Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_H11
         (629 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y10017-1|CAA71124.1|  166|Drosophila melanogaster ribosomal prot...   151   8e-37
Y10015-2|CAA71121.1|  166|Drosophila melanogaster ribosomal prot...   151   8e-37
Y09766-1|CAA70905.1|  166|Drosophila melanogaster ribosomal prot...   151   8e-37
BT021213-1|AAX33361.1|  177|Drosophila melanogaster RH72463p pro...   151   8e-37
AE014296-1484|AAF50393.1|  166|Drosophila melanogaster CG6253-PA...   151   8e-37
BT016128-1|AAV37013.1|  167|Drosophila melanogaster GM06787p pro...   149   4e-36
AJ001164-1|CAA04568.1| 1668|Drosophila melanogaster Additional s...    31   1.7  
AE013599-1902|AAF58239.1| 1669|Drosophila melanogaster CG8787-PA...    31   1.7  
AE014134-600|AAF51111.1|  181|Drosophila melanogaster CG31952-PA...    29   6.9  

>Y10017-1|CAA71124.1|  166|Drosophila melanogaster ribosomal protein
           L14 protein.
          Length = 166

 Score =  151 bits (366), Expect = 8e-37
 Identities = 68/122 (55%), Positives = 90/122 (73%)
 Frame = +3

Query: 102 GPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAPTRLVRKAW 281
           GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+R+K+ +TAPTR+VRKAW
Sbjct: 18  GPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAPTRIVRKAW 77

Query: 282 TDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNRARTAVFKSLKVKAARA 461
           T++ L  +W  S W+ K  N  KR+ + D+DRFKL  A+ +RN+  T  F +LK +    
Sbjct: 78  TESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNKLLTIAFNTLKKRTKAD 137

Query: 462 GT 467
           GT
Sbjct: 138 GT 139


>Y10015-2|CAA71121.1|  166|Drosophila melanogaster ribosomal protein
           L14 protein.
          Length = 166

 Score =  151 bits (366), Expect = 8e-37
 Identities = 68/122 (55%), Positives = 90/122 (73%)
 Frame = +3

Query: 102 GPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAPTRLVRKAW 281
           GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+R+K+ +TAPTR+VRKAW
Sbjct: 18  GPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAPTRIVRKAW 77

Query: 282 TDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNRARTAVFKSLKVKAARA 461
           T++ L  +W  S W+ K  N  KR+ + D+DRFKL  A+ +RN+  T  F +LK +    
Sbjct: 78  TESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNKLLTIAFNTLKKRTKAD 137

Query: 462 GT 467
           GT
Sbjct: 138 GT 139


>Y09766-1|CAA70905.1|  166|Drosophila melanogaster ribosomal protein
           L14 protein.
          Length = 166

 Score =  151 bits (366), Expect = 8e-37
 Identities = 68/122 (55%), Positives = 90/122 (73%)
 Frame = +3

Query: 102 GPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAPTRLVRKAW 281
           GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+R+K+ +TAPTR+VRKAW
Sbjct: 18  GPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAPTRIVRKAW 77

Query: 282 TDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNRARTAVFKSLKVKAARA 461
           T++ L  +W  S W+ K  N  KR+ + D+DRFKL  A+ +RN+  T  F +LK +    
Sbjct: 78  TESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNKLLTIAFNTLKKRTKAD 137

Query: 462 GT 467
           GT
Sbjct: 138 GT 139


>BT021213-1|AAX33361.1|  177|Drosophila melanogaster RH72463p
           protein.
          Length = 177

 Score =  151 bits (366), Expect = 8e-37
 Identities = 68/122 (55%), Positives = 90/122 (73%)
 Frame = +3

Query: 102 GPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAPTRLVRKAW 281
           GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+R+K+ +TAPTR+VRKAW
Sbjct: 29  GPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAPTRIVRKAW 88

Query: 282 TDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNRARTAVFKSLKVKAARA 461
           T++ L  +W  S W+ K  N  KR+ + D+DRFKL  A+ +RN+  T  F +LK +    
Sbjct: 89  TESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNKLLTIAFNTLKKRTKAD 148

Query: 462 GT 467
           GT
Sbjct: 149 GT 150


>AE014296-1484|AAF50393.1|  166|Drosophila melanogaster CG6253-PA
           protein.
          Length = 166

 Score =  151 bits (366), Expect = 8e-37
 Identities = 68/122 (55%), Positives = 90/122 (73%)
 Frame = +3

Query: 102 GPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAPTRLVRKAW 281
           GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+R+K+ +TAPTR+VRKAW
Sbjct: 18  GPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAPTRIVRKAW 77

Query: 282 TDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNRARTAVFKSLKVKAARA 461
           T++ L  +W  S W+ K  N  KR+ + D+DRFKL  A+ +RN+  T  F +LK +    
Sbjct: 78  TESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNKLLTIAFNTLKKRTKAD 137

Query: 462 GT 467
           GT
Sbjct: 138 GT 139


>BT016128-1|AAV37013.1|  167|Drosophila melanogaster GM06787p
           protein.
          Length = 167

 Score =  149 bits (360), Expect = 4e-36
 Identities = 67/122 (54%), Positives = 89/122 (72%)
 Frame = +3

Query: 102 GPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAPTRLVRKAW 281
           GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+R+K+ +TAPTR+VRKAW
Sbjct: 19  GPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAPTRIVRKAW 78

Query: 282 TDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNRARTAVFKSLKVKAARA 461
            ++ L  +W  S W+ K  N  KR+ + D+DRFKL  A+ +RN+  T  F +LK +    
Sbjct: 79  IESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNKLLTIAFNTLKKRTKAD 138

Query: 462 GT 467
           GT
Sbjct: 139 GT 140


>AJ001164-1|CAA04568.1| 1668|Drosophila melanogaster Additional sex
            combs protein.
          Length = 1668

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -1

Query: 425  GSPGTVPLNSCSC*LEPIVICHLCALFFVR*LLGPLTFC 309
            G+  T   N+C+C L  +VIC  C  F     +G    C
Sbjct: 1624 GNEATATANNCACSLNAMVICQQCGAFCHDDCIGAAKLC 1662


>AE013599-1902|AAF58239.1| 1669|Drosophila melanogaster CG8787-PA,
            isoform A protein.
          Length = 1669

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -1

Query: 425  GSPGTVPLNSCSC*LEPIVICHLCALFFVR*LLGPLTFC 309
            G+  T   N+C+C L  +VIC  C  F     +G    C
Sbjct: 1625 GNEATATANNCACSLNAMVICQQCGAFCHDDCIGAAKLC 1663


>AE014134-600|AAF51111.1|  181|Drosophila melanogaster CG31952-PA
           protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 312 ESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNRARTAVFKSLKVKAARA 461
           +S  +  +A +EK A   ++ + K TAA      A T+   +++ KAA A
Sbjct: 72  QSASSAAIAAREKAANAAEFTKEKATAAAAAATEAATSAASTVREKAAAA 121


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,189,809
Number of Sequences: 53049
Number of extensions: 537646
Number of successful extensions: 1417
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1417
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)