Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_G23
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 33 0.048
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 29 0.59
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 28 1.0
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 28 1.4
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 28 1.4
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 27 1.8
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 27 2.4
SPCC1393.12 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 2.4
SPBC1105.08 |||EMP70 family|Schizosaccharomyces pombe|chr 2|||Ma... 26 4.1
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 5.5
SPBC13G1.10c |mug81||ATP-dependent RNA helicase Slh1|Schizosacch... 26 5.5
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 26 5.5
SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces ... 25 7.2
SPCC1450.10c |||iron hydrogenase large subunit |Schizosaccharomy... 25 7.2
SPBC947.15c |||NADH dehydrogenase|Schizosaccharomyces pombe|chr ... 25 7.2
SPBC16D10.02 |trm11||tRNA |Schizosaccharomyces pombe|chr 2|||Manual 25 7.2
SPAC26F1.12c |||conserved eukaryotic protein|Schizosaccharomyces... 25 7.2
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 25 9.5
SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces pomb... 25 9.5
SPAC19B12.13 |cox1102|cox11, cox11-b, cox11, SPAPB8E5.01|fusion ... 25 9.5
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 25 9.5
SPBC32C12.02 |ste11|aff1, stex|transcription factor Ste11|Schizo... 25 9.5
SPAC23C11.17 |||mitochondrial inner membrane protein involved in... 25 9.5
SPBC4F6.09 |str1||siderophore-iron transporter Str1 |Schizosacch... 25 9.5
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 32.7 bits (71), Expect = 0.048
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = +3
Query: 384 DRNNRATTLRESLERLTKDNERLLAGDDKLRAEYDEASKENTEALAELSSTRQALQKIYA 563
D +N + +R L R+ + + L D L +Y E ++ + L L ++ K
Sbjct: 1190 DSDNVISVIRSDLVRVNDELDTLKKDKDSLSTQYSEVCQDRDDLLDSLKGCEESFNKYAV 1249
Query: 564 AIIAICPK 587
++ +C K
Sbjct: 1250 SLRELCTK 1257
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 408 LRESLERLTKDNERLLAGDDKLRAEYDEASKENTEALAELSSTRQALQKIY 560
LR SL DN+++L +L YD +E+ + + L S Q ++
Sbjct: 869 LRSSLNVAISDNDQILTQLAELSKNYDSLEQESAQLNSGLKSLEAEKQLLH 919
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 29.1 bits (62), Expect = 0.59
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 198 FVLEPMEDFYYFSVVSTFSCTSLVSAEFEVSRQYSNFLLT 79
FV + + F Y S+ +TFS S + + +NFLLT
Sbjct: 152 FVSKDTKSFSYSSLANTFSLISSTKSRIRIVTLLTNFLLT 191
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 28.3 bits (60), Expect = 1.0
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 411 RESLERLTKDNERLLAGDDKLRAEYDEASKENTEALAELSSTRQALQKI 557
RE R+ +DN + A +R ++DE E T L E S + LQ +
Sbjct: 1761 REKNLRIRQDNRHMHAEIGDIRTKFDELVLEKTNLLKENSILQADLQSL 1809
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -2
Query: 311 CHLCVLELQRMCIYSHTFCFPLKLPYCRRTAVKHPGHLLC 192
C C+LE ++ +Y C P LP + + G+++C
Sbjct: 770 CVECLLEDHQVRVYCVLICAPFTLPRVTKNGRQEIGNMMC 809
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 51 QLRTEKRKFELKE-NLSTDEKLRIQRKLVKYRKKYLQQKNNRNPPWVP 191
+LR ++R E + +L+ EK R++ K RKK ++ PPW P
Sbjct: 1218 RLRPDQRAMENGQYDLAASEKNRLEEK---QRKKRRMREQGEMPPWSP 1262
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 27.5 bits (58), Expect = 1.8
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Frame = +3
Query: 375 YYLDRNNRATTLRESLERLTKDNERLLA---GDDK----LRAEYDEASKENTEALAELSS 533
+ L + LR L+ + K NE LL G ++ L E +E ++ ELSS
Sbjct: 553 HILRLQDEVNQLRNELDLVNKRNEDLLIELQGKEEKIQYLETENEEVLQKYENLQEELSS 612
Query: 534 TRQALQKIYAAI 569
TR+ L K AA+
Sbjct: 613 TRKLLTKNEAAV 624
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 369 VGYYLDRN-NRATTLRESLERLTKDNERLLAGDDKLRAEYDEASKE 503
V Y+ D+N + E +++++ + L GD+KLR++YD+ KE
Sbjct: 33 VKYHPDKNPDDPQGASEKFQKISEAYQVL--GDEKLRSQYDQFGKE 76
>SPCC1393.12 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 108
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 369 VGYYLDRNNRATTLRESLERLTKDNERLLAGDDKLRAEYDEASKENTE 512
VGYY+ R+N R++ RL + N ++ + +D+A E TE
Sbjct: 16 VGYYMTRHN-----RQASSRLEQKNAEIVRAVENEGQRFDKAVGETTE 58
>SPBC1105.08 |||EMP70 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 629
Score = 26.2 bits (55), Expect = 4.1
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 552 FAMLVWSKTTRQALPCSLWML 490
F M+ WSK++ +P S W+L
Sbjct: 418 FNMVFWSKSSSSTVPFSSWLL 438
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.8 bits (54), Expect = 5.5
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +3
Query: 390 NNRATTLRESLERLTKDNERLLAGDDKLRAEYDEASKENTEALAELSSTRQALQKIYAAI 569
NN+A R + L +NE L + +D + EN ++L +S Q KI +
Sbjct: 83 NNQAEESRNLISVLRNENESLKTNLENQNKRFDALTTEN-QSLRRANSELQEQSKIASEQ 141
Query: 570 IAI 578
++I
Sbjct: 142 LSI 144
>SPBC13G1.10c |mug81||ATP-dependent RNA helicase
Slh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1935
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1
Query: 501 LWMLHHIQLLTCHRQRATSHYLS 433
L +LHH QLL R +TSH LS
Sbjct: 1038 LEILHHEQLLLNKRNVSTSHLLS 1060
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 63 EKRKFELKENLSTDEKLRIQRKLVKYRKKYLQQK 164
+KRK ELK+ L + + I K K KY++ K
Sbjct: 66 QKRKQELKDQLLKENEGSISSKKKKRLDKYIENK 99
>SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 501
Score = 25.4 bits (53), Expect = 7.2
Identities = 22/92 (23%), Positives = 38/92 (41%)
Frame = -1
Query: 468 CHRQRATSHYLSLIFQETLSGLSLGYFYPSSSRRIQRRKPVGRAIGEKHLSVLPSVRLGT 289
CH A + + F + ++ L F + ++ P +GE +VLP++
Sbjct: 259 CHAYWAPNFWALYSFVDRVAFAVLPRFGYALNQGTSINAPTRGLVGESSFAVLPNI---P 315
Query: 288 PTHVYLFPYILLSFETSVLQTHCCKASWPSFV 193
P + YI L + +VL K +W FV
Sbjct: 316 PALTF---YICLGLQITVLIKLFIKPTWRVFV 344
>SPCC1450.10c |||iron hydrogenase large subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 538
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 354 FSVEFVGYYLDRNNRATTLRESLERLTKDNERLLA 458
F ++ VG Y+ NN+ L E R + NE+L++
Sbjct: 363 FGIDDVGPYVSMNNKNGDLTEYTLRHPETNEQLIS 397
>SPBC947.15c |||NADH dehydrogenase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 551
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 18 VKKRKRNWLALQLRTEKRKFELKENLSTDEK 110
V ++ WLA L E +KF L E + EK
Sbjct: 421 VANQQGAWLAKNLNVEGKKFALHERIQALEK 451
>SPBC16D10.02 |trm11||tRNA |Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 375 SRRIQRRKPVGRAIGEKHLSVLPSVRLGTPTH 280
SRR+ + + RA K L++LP + TP+H
Sbjct: 413 SRRLLTFQRLPRAHDSKSLNLLPKINNKTPSH 444
>SPAC26F1.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 356
Score = 25.4 bits (53), Expect = 7.2
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = -1
Query: 495 MLHHIQLLTCHRQRATSHYLSLIFQETLSGLSLGYFYPSSSRRIQRRKPVGRAIGEKHLS 316
M +QLL ++R H++ ETL L+ R RR+ V I E HL+
Sbjct: 257 MFDELQLLPDDKKREPDHFIMKTLVETLVLLTA----TREGREHMRRRKVYPIIRELHLN 312
Query: 315 V 313
V
Sbjct: 313 V 313
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.0 bits (52), Expect = 9.5
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 21 KKRKRNWLALQLRTEKRKFELKENLSTDEKLRIQRKL-VKYRKKY 152
++ K+ ALQL+ EL+ S +EKL+ + L ++ RKKY
Sbjct: 510 QEHKKEVEALQLQLVNSSTELESVKSENEKLKNELVLEIEKRKKY 554
>SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 298
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Frame = +3
Query: 60 TEKRKFELKENLSTDEKLRIQRKLVKY-------RKKYLQQKNNRNPPWVPTQKMA 206
TEK++ + K++LS DE + +++ Y K+L + +N WVP Q +A
Sbjct: 49 TEKKEDDGKKDLSFDEA-EVLKQVEFYFSDTNLPHDKFLWTTSQKNDGWVPIQTIA 103
>SPAC19B12.13 |cox1102|cox11, cox11-b, cox11, SPAPB8E5.01|fusion
cytochrome c oxidase assembly protein Cox1102,
mitochondrial ribosomal protein
Rsm2202|Schizosaccharomyces pombe|chr 1|||Manual
Length = 753
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 159 VVSTFSCTSLVSAEFEVSRQYS 94
+ ++FSC + +S +SRQYS
Sbjct: 538 IFTSFSCYNCISGTRNISRQYS 559
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 25.0 bits (52), Expect = 9.5
Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Frame = +3
Query: 102 DEKLRIQRK-LVKYRK--KYLQQKNNRNPPWVPTQKMARMLYSSASAIRKF--QRKAECM 266
DEKLR+++K + Y + K ++Q N QK + + S AS K QR A
Sbjct: 576 DEKLRLEKKEQLSYLEILKVIEQMLESNE-----QKFKKQIVSLASENAKLAAQRDAAVE 630
Query: 267 GIDTHALEFQ----DAQMAALKDVSRRWHVPPAFSVEFVGYYLDRNNRATTL---RESLE 425
+ Q D + +L + + ++E Y +N L ES
Sbjct: 631 NANYSRSLIQKKTTDETVGSLIEKVGKLEYEVQGTLEEATSYYQKNTELQQLLKQNESAS 690
Query: 426 RLTKD-NERLLAGDDKLRAEYDEASKE 503
L K NE+L DKLR+ ++E S +
Sbjct: 691 ELLKSRNEKLCVDYDKLRSVFEEDSSK 717
>SPBC32C12.02 |ste11|aff1, stex|transcription factor
Ste11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 468
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = -1
Query: 297 LGTPTHVYLFPYILLSFETSVLQTHCCKASWPSFVLEPMEDFYYFSVVSTFSCTS 133
LGTP V L ET +L T C S+P+ + + ++ VS+ S T+
Sbjct: 332 LGTPLSVGSTTAYLYGQETELLSTPYCHTSYPA--MSRLNSSSGYTCVSSSSVTN 384
>SPAC23C11.17 |||mitochondrial inner membrane protein involved in
potassium ion transport|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 25.0 bits (52), Expect = 9.5
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -1
Query: 405 LSLGY-FYPSSSRRIQRR-KPVGRAIGEKHLSVLPSVRLGTPTHVYLFPYILLS 250
+++GY SR++ R K +GR + V+P L P V LFP +L S
Sbjct: 150 MAVGYELTRRESRQLTRTLKDIGRLVPFSVFVVVPFAELLLPIAVKLFPNLLPS 203
>SPBC4F6.09 |str1||siderophore-iron transporter Str1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 612
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 222 CCKASWPSFVLEPMEDFYYFSVVSTFSCTSLVSAEFEVSRQYS 94
CC S+ ++ D YY+S + TS+ +A + +S YS
Sbjct: 371 CCAMSFLFYITFYCWDNYYYSFLQVVHYTSITAAGY-ISYTYS 412
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,475,136
Number of Sequences: 5004
Number of extensions: 51165
Number of successful extensions: 217
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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