Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_G22
(610 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M94172-1|AAA51897.1| 2339|Homo sapiens N-type calcium channel al... 31 3.2
AL772363-4|CAI17142.1| 2337|Homo sapiens calcium channel, voltag... 31 3.2
AL772363-3|CAI17144.1| 2339|Homo sapiens calcium channel, voltag... 31 3.2
AL772363-2|CAI17143.1| 2338|Homo sapiens calcium channel, voltag... 31 3.2
AL591424-4|CAI40688.1| 2337|Homo sapiens calcium channel, voltag... 31 3.2
AL591424-3|CAI40687.1| 2339|Homo sapiens calcium channel, voltag... 31 3.2
AL591424-2|CAI40686.1| 2338|Homo sapiens calcium channel, voltag... 31 3.2
AB209467-1|BAD92704.1| 1370|Homo sapiens calcium channel, voltag... 31 3.2
U89277-1|AAC51169.1| 1004|Homo sapiens polyhomeotic 1 homolog pr... 31 4.2
CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein. 31 4.2
BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein. 31 4.2
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 29 9.7
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 29 9.7
AL953897-6|CAI15881.1| 827|Homo sapiens chromosome 1 open readi... 29 9.7
>M94172-1|AAA51897.1| 2339|Homo sapiens N-type calcium channel alpha-1
subunit protein.
Length = 2339
Score = 31.1 bits (67), Expect = 3.2
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 86 SPTNSCQDSPKTCAPGRVVAAPILGTA*NTRYSPTSNTCPRRQVPXTPLTP 238
SPT + P G V +P+L T+ + T RRQ+P TPLTP
Sbjct: 2151 SPTAGQEPGPHPQGSGSVNGSPLLSTS----GASTPGRGGRRQLPQTPLTP 2197
>AL772363-4|CAI17142.1| 2337|Homo sapiens calcium channel,
voltage-dependent, N type, alphar), member 6 protein.
Length = 2337
Score = 31.1 bits (67), Expect = 3.2
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 86 SPTNSCQDSPKTCAPGRVVAAPILGTA*NTRYSPTSNTCPRRQVPXTPLTP 238
SPT + P G V +P+L T+ + T RRQ+P TPLTP
Sbjct: 2149 SPTAGQEPGPHPQGSGSVNGSPLLSTS----GASTPGRGGRRQLPQTPLTP 2195
>AL772363-3|CAI17144.1| 2339|Homo sapiens calcium channel,
voltage-dependent, N type, alpha protein.
Length = 2339
Score = 31.1 bits (67), Expect = 3.2
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 86 SPTNSCQDSPKTCAPGRVVAAPILGTA*NTRYSPTSNTCPRRQVPXTPLTP 238
SPT + P G V +P+L T+ + T RRQ+P TPLTP
Sbjct: 2151 SPTAGQEPGPHPQGSGSVNGSPLLSTS----GASTPGRGGRRQLPQTPLTP 2197
>AL772363-2|CAI17143.1| 2338|Homo sapiens calcium channel,
voltage-dependent, N type, alpha protein.
Length = 2338
Score = 31.1 bits (67), Expect = 3.2
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 86 SPTNSCQDSPKTCAPGRVVAAPILGTA*NTRYSPTSNTCPRRQVPXTPLTP 238
SPT + P G V +P+L T+ + T RRQ+P TPLTP
Sbjct: 2150 SPTAGQEPGPHPQGSGSVNGSPLLSTS----GASTPGRGGRRQLPQTPLTP 2196
>AL591424-4|CAI40688.1| 2337|Homo sapiens calcium channel,
voltage-dependent, N type, alpha(TBP)-associated factor,
100kD protein.
Length = 2337
Score = 31.1 bits (67), Expect = 3.2
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 86 SPTNSCQDSPKTCAPGRVVAAPILGTA*NTRYSPTSNTCPRRQVPXTPLTP 238
SPT + P G V +P+L T+ + T RRQ+P TPLTP
Sbjct: 2149 SPTAGQEPGPHPQGSGSVNGSPLLSTS----GASTPGRGGRRQLPQTPLTP 2195
>AL591424-3|CAI40687.1| 2339|Homo sapiens calcium channel,
voltage-dependent, N type, alphabeta family protein.
Length = 2339
Score = 31.1 bits (67), Expect = 3.2
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 86 SPTNSCQDSPKTCAPGRVVAAPILGTA*NTRYSPTSNTCPRRQVPXTPLTP 238
SPT + P G V +P+L T+ + T RRQ+P TPLTP
Sbjct: 2151 SPTAGQEPGPHPQGSGSVNGSPLLSTS----GASTPGRGGRRQLPQTPLTP 2197
>AL591424-2|CAI40686.1| 2338|Homo sapiens calcium channel,
voltage-dependent, N type, alphaate 3A protein.
Length = 2338
Score = 31.1 bits (67), Expect = 3.2
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 86 SPTNSCQDSPKTCAPGRVVAAPILGTA*NTRYSPTSNTCPRRQVPXTPLTP 238
SPT + P G V +P+L T+ + T RRQ+P TPLTP
Sbjct: 2150 SPTAGQEPGPHPQGSGSVNGSPLLSTS----GASTPGRGGRRQLPQTPLTP 2196
>AB209467-1|BAD92704.1| 1370|Homo sapiens calcium channel,
voltage-dependent, L type, alpha 1B subunit variant
protein.
Length = 1370
Score = 31.1 bits (67), Expect = 3.2
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 86 SPTNSCQDSPKTCAPGRVVAAPILGTA*NTRYSPTSNTCPRRQVPXTPLTP 238
SPT + P G V +P+L T+ + T RRQ+P TPLTP
Sbjct: 1182 SPTAGQEPGPHPQGSGSVNGSPLLSTS----GASTPGRGGRRQLPQTPLTP 1228
>U89277-1|AAC51169.1| 1004|Homo sapiens polyhomeotic 1 homolog
protein.
Length = 1004
Score = 30.7 bits (66), Expect = 4.2
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +2
Query: 104 QDSPKTCAPGRVVAAPILGTA*NTRYSPTSNTCPRRQVPXTPLTPIVHPP 253
Q+ P T APG +A P+ GTA + T++T QVP VH P
Sbjct: 583 QECPPTLAPGMTLA-PVQGTAHVVKGGATTSTPVVAQVPAAFYMQSVHLP 631
>CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein.
Length = 364
Score = 30.7 bits (66), Expect = 4.2
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +2
Query: 113 PKTCAPGRVVAAPILGTA*NTRYSPTSNTCPRRQVPXTPLTPIVHPPSTGVVLT 274
PK V P + T + PT+ T P VP T + + P+T VLT
Sbjct: 127 PKVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTTVPTTTVPTTMSIPTTTTVLT 180
>BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein.
Length = 364
Score = 30.7 bits (66), Expect = 4.2
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +2
Query: 113 PKTCAPGRVVAAPILGTA*NTRYSPTSNTCPRRQVPXTPLTPIVHPPSTGVVLT 274
PK V P + T + PT+ T P VP T + + P+T VLT
Sbjct: 127 PKVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTTVPTTTVPTTMSIPTTTTVLT 180
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +2
Query: 89 PTNSCQDSPKTCAPGRVVAAPILGTA*NTRYSPTSNTCPRRQVPXT-PLTPIVHPPST 259
PT + P T P + PI A T PT+ P T P T PP+T
Sbjct: 862 PTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTT 919
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +2
Query: 89 PTNSCQDSPKTCAPGRVVAAPILGTA*NTRYSPTSNTCPRRQVPXT-PLTPIVHPPST 259
PT + P T P + PI A T PT+ P T P T PP+T
Sbjct: 1487 PTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTT 1544
>AL953897-6|CAI15881.1| 827|Homo sapiens chromosome 1 open reading
frame 167 protein.
Length = 827
Score = 29.5 bits (63), Expect = 9.7
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 316 VEMNARPPTRPITLASLLMWPLL*RSQLHQLTRWSSSRNRRKITVPGGQFSRTRRLSLT 492
+E R PT P TL L+W R Q L W + + + T Q +R RR+ L+
Sbjct: 213 LEKVPRAPTLPDTLQGSLLWAAGQRQQGQCLLLWQARAQQFQGTARWYQHTRQRRIFLS 271
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,627,459
Number of Sequences: 237096
Number of extensions: 1945997
Number of successful extensions: 4862
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4860
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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