Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_G13
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011199-1|AAR88561.1|  689|Drosophila melanogaster GH11476p pro...    39   0.007
AE014297-537|AAF54079.2| 1047|Drosophila melanogaster CG1979-PA ...    39   0.007
AE001572-1|AAD19791.1|  660|Drosophila melanogaster unknown prot...    39   0.007
BT023581-1|AAY84981.1|  314|Drosophila melanogaster IP09436p pro...    29   7.3  
AE014134-338|AAF51306.1|  314|Drosophila melanogaster CG12674-PA...    29   7.3  

>BT011199-1|AAR88561.1|  689|Drosophila melanogaster GH11476p
           protein.
          Length = 689

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
 Frame = +1

Query: 268 KAKTRPNAMVHIPNNLCGITIKPAKPSNSA-LPLSLVGRSITVTKIPKDVNPVSMKLKNN 444
           K KT PNA   +P+     + K +K ++   LPL +V +    T+  K  NP+      +
Sbjct: 451 KDKTSPNAS-SLPSGQDSTSTKTSKVNSQLELPLKIVAKHEAPTEFKKIFNPIPPSELQS 509

Query: 445 GCAIQKNNSVSPRPVVRQYIRQSPKS----KMTGCRIPVNLVNMNNAR 576
                K +S +     R++I   P S    K   C+IP   ++++NA+
Sbjct: 510 SKKDTKLDSKTKATKTREFILNKPPSSNSLKPADCKIPNPFISLDNAK 557


>AE014297-537|AAF54079.2| 1047|Drosophila melanogaster CG1979-PA
           protein.
          Length = 1047

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
 Frame = +1

Query: 268 KAKTRPNAMVHIPNNLCGITIKPAKPSNSA-LPLSLVGRSITVTKIPKDVNPVSMKLKNN 444
           K KT PNA   +P+     + K +K ++   LPL +V +    T+  K  NP+      +
Sbjct: 451 KDKTSPNAS-SLPSGQDSTSTKTSKVNSQLELPLKIVAKHEAPTEFKKIFNPIPPSELQS 509

Query: 445 GCAIQKNNSVSPRPVVRQYIRQSPKS----KMTGCRIPVNLVNMNNAR 576
                K +S +     R++I   P S    K   C+IP   ++++NA+
Sbjct: 510 SKKDTKLDSKTKATKTREFILNKPPSSNSLKPADCKIPNPFISLDNAK 557


>AE001572-1|AAD19791.1|  660|Drosophila melanogaster unknown
           protein.
          Length = 660

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
 Frame = +1

Query: 268 KAKTRPNAMVHIPNNLCGITIKPAKPSNSA-LPLSLVGRSITVTKIPKDVNPVSMKLKNN 444
           K KT PNA   +P+     + K +K ++   LPL +V +    T+  K  NP+      +
Sbjct: 405 KDKTSPNAS-SLPSGQDSTSTKTSKVNSQLELPLKIVAKHEAPTEFKKIFNPIPPSELQS 463

Query: 445 GCAIQKNNSVSPRPVVRQYIRQSPKS----KMTGCRIPVNLVNMNNAR 576
                K +S +     R++I   P S    K   C+IP   ++++NA+
Sbjct: 464 SKKDTKLDSKTKATKTREFILNKPPSSNSLKPADCKIPNPFISLDNAK 511


>BT023581-1|AAY84981.1|  314|Drosophila melanogaster IP09436p
           protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 361 PLSLVGRSITVTKIPKDVNPVSMK 432
           PL  + RS+ V K PKD+ PVS++
Sbjct: 134 PLPGLQRSVAVPKAPKDLQPVSLE 157


>AE014134-338|AAF51306.1|  314|Drosophila melanogaster CG12674-PA
           protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 361 PLSLVGRSITVTKIPKDVNPVSMK 432
           PL  + RS+ V K PKD+ PVS++
Sbjct: 134 PLPGLQRSVAVPKAPKDLQPVSLE 157


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,665,575
Number of Sequences: 53049
Number of extensions: 569654
Number of successful extensions: 1514
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1514
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)