Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_F18
(655 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 365 e-102
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 153 2e-38
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 153 2e-38
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 152 4e-38
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 152 4e-38
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 92 7e-20
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 44 1e-05
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 44 3e-05
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 41 2e-04
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.4
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 27 2.4
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 27 2.4
SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit Nse6|Schizosa... 27 3.1
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 4.1
SPCC1235.10c |sec6||exocyst complex subunit Sec6|Schizosaccharom... 26 5.5
SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex ... 25 7.2
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc... 25 7.2
SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomy... 25 7.2
SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces po... 25 9.5
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 25 9.5
SPAC17G6.12 |cul1|pcu1|cullin 1|Schizosaccharomyces pombe|chr 1|... 25 9.5
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 365 bits (898), Expect = e-102
Identities = 178/187 (95%), Positives = 187/187 (100%)
Frame = +2
Query: 95 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 274
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 275 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 454
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120
Query: 455 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 634
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180
Query: 635 KIQDKEG 655
KIQDKEG
Sbjct: 181 KIQDKEG 187
Score = 365 bits (898), Expect = e-102
Identities = 178/187 (95%), Positives = 187/187 (100%)
Frame = +2
Query: 95 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 274
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 275 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 454
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 196
Query: 455 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 634
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 256
Query: 635 KIQDKEG 655
KIQDKEG
Sbjct: 257 KIQDKEG 263
Score = 365 bits (898), Expect = e-102
Identities = 178/187 (95%), Positives = 187/187 (100%)
Frame = +2
Query: 95 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 274
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 275 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 454
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 272
Query: 455 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 634
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 332
Query: 635 KIQDKEG 655
KIQDKEG
Sbjct: 333 KIQDKEG 339
Score = 301 bits (740), Expect = 4e-83
Identities = 146/153 (95%), Positives = 153/153 (100%)
Frame = +2
Query: 95 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 274
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 275 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 454
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 348
Query: 455 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 553
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 2e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +2
Query: 95 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 274
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 275 IQKESTLHLVLRLRGG-MQIFVKTLTGK 355
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 153 bits (371), Expect = 2e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +2
Query: 323 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 502
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 503 IQKESTLHLVLRLRGG-MQIFVKTLTGK 583
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 68.5 bits (160), Expect = 8e-13
Identities = 32/35 (91%), Positives = 35/35 (100%)
Frame = +2
Query: 551 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 655
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEG
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG 35
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 2e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +2
Query: 95 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 274
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 275 IQKESTLHLVLRLRGG-MQIFVKTLTGK 355
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 153 bits (371), Expect = 2e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +2
Query: 323 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 502
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 503 IQKESTLHLVLRLRGG-MQIFVKTLTGK 583
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 68.5 bits (160), Expect = 8e-13
Identities = 32/35 (91%), Positives = 35/35 (100%)
Frame = +2
Query: 551 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 655
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEG
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG 35
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 4e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +2
Query: 95 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 274
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 275 IQKESTLHLVLRLRGG 322
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 4e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +2
Query: 323 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 502
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 503 IQKESTLHLVLRLRGG 550
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 68.5 bits (160), Expect = 8e-13
Identities = 32/35 (91%), Positives = 35/35 (100%)
Frame = +2
Query: 551 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 655
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEG
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG 35
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 4e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +2
Query: 95 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 274
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 275 IQKESTLHLVLRLRGG 322
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 4e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +2
Query: 323 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 502
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 503 IQKESTLHLVLRLRGG 550
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 68.5 bits (160), Expect = 8e-13
Identities = 32/35 (91%), Positives = 35/35 (100%)
Frame = +2
Query: 551 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 655
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEG
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG 35
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 91.9 bits (218), Expect = 7e-20
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +2
Query: 95 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 274
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 275 IQKESTLHLVLRLRGG 322
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 91.9 bits (218), Expect = 7e-20
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +2
Query: 323 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 502
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 503 IQKESTLHLVLRLRGG 550
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 40.7 bits (91), Expect = 2e-04
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +2
Query: 551 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 655
M I VKTLTGK I L+++ +D + +K ++++KEG
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEG 35
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 44.4 bits (100), Expect = 1e-05
Identities = 22/75 (29%), Positives = 40/75 (53%)
Frame = +2
Query: 89 TTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 268
T + + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L
Sbjct: 2 TNISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKT 61
Query: 269 YNIQKESTLHLVLRL 313
Y IQ ++HLV L
Sbjct: 62 YKIQDGHSIHLVKTL 76
Score = 42.3 bits (95), Expect = 6e-05
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 323 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 502
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 503 IQKESTLHLVLRL 541
IQ ++HLV L
Sbjct: 64 IQDGHSIHLVKTL 76
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 43.6 bits (98), Expect = 3e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +2
Query: 125 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 286
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
Score = 43.6 bits (98), Expect = 3e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +2
Query: 353 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 514
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 122 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 295
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 350 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 523
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.1 bits (57), Expect = 2.4
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 1/174 (0%)
Frame = -2
Query: 654 PSLS*ILAFTFSMVSDASTSSVMVL-PVSVFTKICMPPLRRNTKCRVDSFWML*SDNVRP 478
PS + + T S + +ST S +L P SV + I P + + + S + SD P
Sbjct: 115 PSSTSFFSPTSSEYTPSSTESSSLLDPSSVSSAIL--PSSTSVEVSISSSSLSSSD---P 169
Query: 477 SSSCLPAKINRC*SGGIPSLS*ILAFTFSMVSDASTSSVMVLPVSVFTKICIPPLRRNTK 298
+S + ++ S PS+S + TFS + STSS + SV + P ++
Sbjct: 170 LTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSST 229
Query: 297 WRVDSF*IL*SDNVRPSSSCFPAKISRC*SGGMPSLS*IFAFTFSMVSDASTSN 136
S + SSS + +S S S S + + S++S +S+S+
Sbjct: 230 LTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSS---SSSSSIISSSSSSS 280
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 27.1 bits (57), Expect = 2.4
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +2
Query: 98 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 271
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 272 NIQKESTLHLVLRLRGGMQIFVKTLTGKTI 361
+ T HLV+ + + + T ++
Sbjct: 65 DATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
Score = 27.1 bits (57), Expect = 2.4
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +2
Query: 326 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 499
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 500 NIQKESTLHLVLRLRGGMQIFVKTLTGKTI 589
+ T HLV+ + + + T ++
Sbjct: 65 DATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -1
Query: 637 LGFHILNGVRCFNF*CDGFTGKCFHKDLHATS 542
L +G + +N CD F GKCFHK ATS
Sbjct: 15 LSIGTFDGYKIYN--CDPF-GKCFHKIQGATS 43
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 409 LGFHILNGVRCFNF*CDGFTGKCFHKDLHSTS 314
L +G + +N CD F GKCFHK +TS
Sbjct: 15 LSIGTFDGYKIYN--CDPF-GKCFHKIQGATS 43
>SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit
Nse6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 522
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +2
Query: 53 DNFNNFCEFQKETTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK 193
+N N F ETT + L + + +++E + EN+K+ ++ K
Sbjct: 222 NNLNQIVRFIFETTADMIGIDLAKRQVPIQLERTSASENLKSNLKIK 268
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 4.1
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 5/127 (3%)
Frame = -2
Query: 438 SGGIPSLS*ILAFTFSMVSDASTSSVMVLPVSVFTK-----ICIPPLRRNTKWRVDSF*I 274
S IPS + + ++ S A++S VSV T + +PP +T SF
Sbjct: 146 STSIPSTAITVTANSTIYSSATSSFPYSTDVSVSTGTSTDIVTLPPPASSTS----SFST 201
Query: 273 L*SDNVRPSSSCFPAKISRC*SGGMPSLS*IFAFTFSMVSDASTSNVMVLPVRVFTKICM 94
+ + ++ PSSS F + G P + S++S AS S+ VLP + T
Sbjct: 202 ITNTSMIPSSSSFTT------TTGSPYYNTSSFLPSSVISSASLSSSSVLPTSIITSTST 255
Query: 93 VVSFWNS 73
V+ +S
Sbjct: 256 PVTVSSS 262
>SPCC1235.10c |sec6||exocyst complex subunit
Sec6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 730
Score = 25.8 bits (54), Expect = 5.5
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +2
Query: 44 TICDNFN----NFCEFQKETTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 211
T+ DNF+ NFC + +KT+ I VEA ++ + V I+D + PD
Sbjct: 164 TLSDNFDRLVLNFCRNIFQLVKSGHIKTIV--QIFKIVEAEESSDEVLKSIRDAKSSLPD 221
Query: 212 QQ 217
Q
Sbjct: 222 SQ 223
>SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex
subunit Sld3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 668
Score = 25.4 bits (53), Expect = 7.2
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +2
Query: 23 PSCTT-CPTICDNFNNFCEFQ---KETTMQIFVKTLTGKTITLEVEASDTIENVKAKIQD 190
PSC+ ++ D+ N +Q +T + +VK + GKT L VE + +E KA + +
Sbjct: 202 PSCSRDVKSLLDHLYNSYFYQLLMTKTPVVFYVKQMVGKTRQLAVEVHNHVEE-KALVDE 260
>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 919
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 81 WNSQKLLKLSQIVGHVVQLGSSFTN 7
WN +L LS ++G V+ +G+ TN
Sbjct: 748 WNLPRLWGLSTVIGIVLAIGTWITN 772
>SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 25.4 bits (53), Expect = 7.2
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = +2
Query: 53 DNFNNFCEFQKETTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP---PDQQRL 223
++ NN+ + ++ ++K G T EV T+ + + +G P P +
Sbjct: 76 NSHNNYASIVGDASIGHYLK---GPERTSEVSLPQTVNLSEISNNNDKGQPTNTPPVRST 132
Query: 224 IFAGKQLEDGRTLSDYNIQKESTLH 298
I A +G TL+ YN LH
Sbjct: 133 IVAPSLYSEGSTLNHYNNGSHQVLH 157
>SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 635
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 639 ILAFTFSMVSDASTSSVMVLPVSVFT 562
ILAF F +T +V VLPVS F+
Sbjct: 182 ILAFGFVNSFSGATDTVRVLPVSQFS 207
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 411 ILAFTFSMVSDASTSSVMVLPVSVFT 334
ILAF F +T +V VLPVS F+
Sbjct: 182 ILAFGFVNSFSGATDTVRVLPVSQFS 207
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 25.0 bits (52), Expect = 9.5
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 13/132 (9%)
Frame = +2
Query: 110 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA------GKQLE-------D 250
K TGKT + + + ++ K+KIQ +P + L + GK +
Sbjct: 89 KNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLGKHMNVKVMVTTG 148
Query: 251 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 430
G TL D I+ T+H+V+ G V L GK + E + + + K+ E
Sbjct: 149 GTTLRDDIIRLNDTVHIVVGTPGR----VLDLAGKGVADFSECTTFVMDEADKLLSPEFT 204
Query: 431 PPDQQRLIFAGK 466
P +Q L + K
Sbjct: 205 PIIEQLLSYFPK 216
>SPAC17G6.12 |cul1|pcu1|cullin 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 767
Score = 25.0 bits (52), Expect = 9.5
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 53 DNFNNFCEFQKETTMQIFVKTLTGKTITLEVEASDTIEN 169
D+ N +F K QIF + G TIT +E I N
Sbjct: 18 DSLNGTWDFLKTGVSQIFERLDEGMTITKYMELYTAIHN 56
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,661,642
Number of Sequences: 5004
Number of extensions: 54355
Number of successful extensions: 202
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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