Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_F17
(655 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-P... 33 0.26
AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-P... 33 0.26
X05709-1|CAA29180.2| 1123|Drosophila melanogaster RNA polymerase... 31 1.4
BT003576-1|AAO39580.1| 1309|Drosophila melanogaster LD40262p pro... 31 1.4
AY069600-1|AAL39745.1| 563|Drosophila melanogaster LD35343p pro... 31 1.4
AE013599-1197|AAF58732.2| 1309|Drosophila melanogaster CG30020-P... 31 1.4
BT003265-1|AAO25022.1| 1176|Drosophila melanogaster LD22387p pro... 30 3.2
AE014297-1804|AAF55024.1| 1176|Drosophila melanogaster CG3180-PA... 30 3.2
BT001316-1|AAN71071.1| 690|Drosophila melanogaster AT15050p pro... 29 7.3
AF115775-1|AAD29307.2| 686|Drosophila melanogaster Hsp90-relate... 29 7.3
AE013599-183|AAF57362.1| 691|Drosophila melanogaster CG3152-PA ... 29 7.3
>AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-PA,
isoform A protein.
Length = 4345
Score = 33.5 bits (73), Expect = 0.26
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +3
Query: 309 VTELLNNAESNTINFSYKLWTTGHQNIVQSC-FPLEFRLILDDKKDCKIINKHDDLYMTL 485
+T N + + SY L +GH N+V S +P R+ D + N H TL
Sbjct: 2713 ITPKFKNEHTFALTGSYDLEKSGHHNVVGSLDYPASRRITDLDVSVSSLSNMHGIFNSTL 2772
Query: 486 SKDLDQNGDRDAYGDEDDHKNSWKFMSS-WESNRVYFKIFNPKYN 617
L+ + + + ++ S+++ W + YFK+ N Y+
Sbjct: 2773 PTFLNVSWLKTDFNFTTNNGKSYRYCRCFWPQDTAYFKL-NSNYD 2816
>AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-PB,
isoform B protein.
Length = 4374
Score = 33.5 bits (73), Expect = 0.26
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +3
Query: 309 VTELLNNAESNTINFSYKLWTTGHQNIVQSC-FPLEFRLILDDKKDCKIINKHDDLYMTL 485
+T N + + SY L +GH N+V S +P R+ D + N H TL
Sbjct: 2742 ITPKFKNEHTFALTGSYDLEKSGHHNVVGSLDYPASRRITDLDVSVSSLSNMHGIFNSTL 2801
Query: 486 SKDLDQNGDRDAYGDEDDHKNSWKFMSS-WESNRVYFKIFNPKYN 617
L+ + + + ++ S+++ W + YFK+ N Y+
Sbjct: 2802 PTFLNVSWLKTDFNFTTNNGKSYRYCRCFWPQDTAYFKL-NSNYD 2845
>X05709-1|CAA29180.2| 1123|Drosophila melanogaster RNA polymerase
protein.
Length = 1123
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +3
Query: 237 YDDATKRCEQLQSEPNGSYIIKNTVTELLNNAESNTINFSYKLWTTGHQNIVQSCFPLEF 416
Y DA + C L NGS ++K T E+L + N N+S+++ +V+ + LE
Sbjct: 563 YTDAGRICRPLLIVENGSLLLKKTHVEMLKERDYN--NYSWQVLVA--SGVVEYMYTLEE 618
Query: 417 RLIL 428
++
Sbjct: 619 ETVM 622
>BT003576-1|AAO39580.1| 1309|Drosophila melanogaster LD40262p protein.
Length = 1309
Score = 31.1 bits (67), Expect = 1.4
Identities = 37/130 (28%), Positives = 53/130 (40%), Gaps = 5/130 (3%)
Frame = +3
Query: 153 ATFFNMSVEASDSGKSDRKLYNSVISADYDDATKRCEQLQSEPNGSYIIKNTVTELLNNA 332
AT ++ + + S L+ + D+D R E QS PN I + L +NA
Sbjct: 994 ATATSLESPVATTASSSTTLFPTPTPFDFDYDIMRDEAQQSSPN----IHDVSKALSDNA 1049
Query: 333 ESN-TINFSYKLW-TTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSK---DL 497
S+ IN SYKL TT + RL CK+ N+ D L K +L
Sbjct: 1050 SSSCPINESYKLLSTTALETSPAKGLRSNSRLHRSSIHICKLCNQTFDELGKLVKHEMEL 1109
Query: 498 DQNGDRDAYG 527
N +R +G
Sbjct: 1110 HSNTERSRWG 1119
>AY069600-1|AAL39745.1| 563|Drosophila melanogaster LD35343p
protein.
Length = 563
Score = 31.1 bits (67), Expect = 1.4
Identities = 37/130 (28%), Positives = 53/130 (40%), Gaps = 5/130 (3%)
Frame = +3
Query: 153 ATFFNMSVEASDSGKSDRKLYNSVISADYDDATKRCEQLQSEPNGSYIIKNTVTELLNNA 332
AT ++ + + S L+ + D+D R E QS PN I + L +NA
Sbjct: 248 ATATSLESPVATTASSSTTLFPTPTPFDFDYDIMRDEAQQSSPN----IHDVSKALSDNA 303
Query: 333 ESN-TINFSYKLW-TTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSK---DL 497
S+ IN SYKL TT + RL CK+ N+ D L K +L
Sbjct: 304 SSSCPINESYKLLSTTALETSPAKGLRSNSRLHRSSIHICKLCNQTFDELGKLVKHEMEL 363
Query: 498 DQNGDRDAYG 527
N +R +G
Sbjct: 364 HSNTERSRWG 373
>AE013599-1197|AAF58732.2| 1309|Drosophila melanogaster CG30020-PA
protein.
Length = 1309
Score = 31.1 bits (67), Expect = 1.4
Identities = 37/130 (28%), Positives = 53/130 (40%), Gaps = 5/130 (3%)
Frame = +3
Query: 153 ATFFNMSVEASDSGKSDRKLYNSVISADYDDATKRCEQLQSEPNGSYIIKNTVTELLNNA 332
AT ++ + + S L+ + D+D R E QS PN I + L +NA
Sbjct: 994 ATATSLESPVATTASSSTTLFPTPTPFDFDYDIMRDEAQQSSPN----IHDVSKALSDNA 1049
Query: 333 ESN-TINFSYKLW-TTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSK---DL 497
S+ IN SYKL TT + RL CK+ N+ D L K +L
Sbjct: 1050 SSSCPINESYKLLSTTALETSPAKGLRSNSRLHRSSIHICKLCNQTFDELGKLVKHEMEL 1109
Query: 498 DQNGDRDAYG 527
N +R +G
Sbjct: 1110 HSNTERSRWG 1119
>BT003265-1|AAO25022.1| 1176|Drosophila melanogaster LD22387p
protein.
Length = 1176
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 237 YDDATKRCEQLQSEPNGSYIIKNTVTELLNNAESNTINFSYKL 365
Y DA + C L NGS ++K T E+L + N N+S+++
Sbjct: 616 YTDAGRICRPLLIVENGSLLLKKTHVEMLKERDYN--NYSWQV 656
>AE014297-1804|AAF55024.1| 1176|Drosophila melanogaster CG3180-PA
protein.
Length = 1176
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 237 YDDATKRCEQLQSEPNGSYIIKNTVTELLNNAESNTINFSYKL 365
Y DA + C L NGS ++K T E+L + N N+S+++
Sbjct: 616 YTDAGRICRPLLIVENGSLLLKKTHVEMLKERDYN--NYSWQV 656
>BT001316-1|AAN71071.1| 690|Drosophila melanogaster AT15050p
protein.
Length = 690
Score = 28.7 bits (61), Expect = 7.3
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +3
Query: 309 VTELLNNAESNTINFSYKLWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMT 482
V EL++NA F Y + G +N+ PLE R I DK ++I + + MT
Sbjct: 91 VRELISNASDALEKFRYTSLSAGGENLAGKDRPLEIR-ITTDKPLMQLIIQDTGIGMT 147
>AF115775-1|AAD29307.2| 686|Drosophila melanogaster Hsp90-related
protein TRAP1 protein.
Length = 686
Score = 28.7 bits (61), Expect = 7.3
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +3
Query: 309 VTELLNNAESNTINFSYKLWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMT 482
V EL++NA F Y + G +N+ PLE R I DK ++I + + MT
Sbjct: 86 VRELISNASDALEKFRYTSLSAGGENLAGKDRPLEIR-ITTDKPLMQLIIQDTGIGMT 142
>AE013599-183|AAF57362.1| 691|Drosophila melanogaster CG3152-PA
protein.
Length = 691
Score = 28.7 bits (61), Expect = 7.3
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +3
Query: 309 VTELLNNAESNTINFSYKLWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMT 482
V EL++NA F Y + G +N+ PLE R I DK ++I + + MT
Sbjct: 91 VRELISNASDALEKFRYTSLSAGGENLAGKDRPLEIR-ITTDKPLMQLIIQDTGIGMT 147
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,907,005
Number of Sequences: 53049
Number of extensions: 581693
Number of successful extensions: 1459
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1455
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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