Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_F17
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92786-6|CAB07208.1| 569|Caenorhabditis elegans Hypothetical pr... 35 0.044
U58753-6|AAC24440.1| 705|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC024809-5|AAF59544.3| 287|Caenorhabditis elegans Hypothetical ... 29 2.2
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z67884-2|CAA91808.1| 429|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z92803-8|CAB07245.1| 814|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81592-4|CAB04728.1| 436|Caenorhabditis elegans Hypothetical pr... 29 3.8
U94835-1|AAC47510.1| 814|Caenorhabditis elegans multiple exosto... 29 3.8
U39470-2|AAC71118.1| 862|Caenorhabditis elegans Temporarily ass... 29 3.8
AL132848-3|CAB60386.1| 327|Caenorhabditis elegans Hypothetical ... 29 3.8
AB077851-1|BAB83878.1| 814|Caenorhabditis elegans heparan sulfa... 29 3.8
Z99942-9|CAB17073.3| 675|Caenorhabditis elegans Hypothetical pr... 28 6.7
AY652945-1|AAT73712.1| 675|Caenorhabditis elegans guanylate cyc... 28 6.7
AL008867-4|CAD56232.2| 675|Caenorhabditis elegans Hypothetical ... 28 6.7
AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical... 27 8.8
>Z92786-6|CAB07208.1| 569|Caenorhabditis elegans Hypothetical
protein F47H4.9 protein.
Length = 569
Score = 35.1 bits (77), Expect = 0.044
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +1
Query: 151 LRHFSICLLKQVILANPTENYTIQSFPLTTMMQPKDASNFNPNR 282
LR+F +L++++L +PT+N I+ L M Q K+A NF +R
Sbjct: 431 LRNFKSGILQEIVLGSPTDNADIEK--LVDMRQWKEAKNFESSR 472
>U58753-6|AAC24440.1| 705|Caenorhabditis elegans Hypothetical
protein W03B1.8 protein.
Length = 705
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 216 NSVIS-ADYDDATKRCEQLQSEPNGSYIIKNTVTELLNNA 332
N+VI DY+ A KR +QL + NG ++ + + E NN+
Sbjct: 607 NTVIKLGDYEMARKRYDQLVKDCNGKCVLVDYLPEFYNNS 646
>AC024809-5|AAF59544.3| 287|Caenorhabditis elegans Hypothetical
protein Y53G8AR.5 protein.
Length = 287
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -3
Query: 248 CIIVVSGND*IV*FSVGFARITCFNRHIEKCRNYNRQGC*NLQFHLEFSLRFELLYP 78
C+I ++ + IV F CFNR++ +C RQ + Q H++ + + P
Sbjct: 122 CLICLASSPIIVTACDHFMHFACFNRYLTECLTGLRQEIQDAQKHMKEQVETNIFCP 178
>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical protein
ZK1067.2 protein.
Length = 2219
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = -2
Query: 615 CISG*RF*NRLCSIPTRT*TSNCSYGRPRRH--MRLYHHFGLDPCSESCTDRHAC 457
C +G R R CS +NCS R ++ + + PC+E CTD+ C
Sbjct: 1824 CGAGERGFGRDCSKLCALCVNNCSNKCAHRSCTLKCFEECNVKPCTEPCTDKLKC 1878
>Z67884-2|CAA91808.1| 429|Caenorhabditis elegans Hypothetical
protein T14G8.4 protein.
Length = 429
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -1
Query: 400 QL*TIFWCPVVHSL*EKLIVLDSALLSSSVTVFFMMYEPFGSD*SCSHLLVASS 239
QL + WCP + ++ L++AL S TVF Y + D + +L VAS+
Sbjct: 237 QLNIVMWCPFIVGT---VVNLNAALRQSLYTVFVENYLDYEEDQTAHNLNVAST 287
>Z92803-8|CAB07245.1| 814|Caenorhabditis elegans Hypothetical
protein K01G5.6 protein.
Length = 814
Score = 28.7 bits (61), Expect = 3.8
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = +3
Query: 150 IATFFNMSVEASDSGKSDRK---LYNSVISADYDDATKRCEQLQSEPNGSYIIKNTVTEL 320
I++F + V+ SG+S+++ ++ VI + K C ++ NG T +
Sbjct: 175 ISSFMPVYVDIITSGQSEKEWLNVFQEVIPNLVETPDKACIKIHIS-NGIASPNTTFNSI 233
Query: 321 LNNAESNTINFSYKLWTTGHQNIVQSCFPLEFRLILDDKKD 443
L N S INF K I FP++ I +K D
Sbjct: 234 LFNVGSPIINFQSKSIHVQASKIRSFDFPVDVNHIAVEKVD 274
>Z81592-4|CAB04728.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.4 protein.
Length = 436
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +3
Query: 468 DLYMTLSKDLDQNGDRDAY-GDEDD---HKNSWKFMSSWESNRVYFKIFNPKYNQRLKMG 635
++Y T DLD+ + ++Y G E D H + W WE N F + Q + MG
Sbjct: 248 EIYGTELVDLDKAINLNSYIGIERDVLVHGDLWSANILWEENEGKFLVSKVIDYQLIHMG 307
Query: 636 DPVKD 650
+P +D
Sbjct: 308 NPAED 312
>U94835-1|AAC47510.1| 814|Caenorhabditis elegans multiple exostoses
homolog 2 protein.
Length = 814
Score = 28.7 bits (61), Expect = 3.8
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = +3
Query: 150 IATFFNMSVEASDSGKSDRK---LYNSVISADYDDATKRCEQLQSEPNGSYIIKNTVTEL 320
I++F + V+ SG+S+++ ++ VI + K C ++ NG T +
Sbjct: 175 ISSFMPVYVDIITSGQSEKEWLNVFQEVIPNLVETPDKACIKIHIS-NGIASPNTTFNSI 233
Query: 321 LNNAESNTINFSYKLWTTGHQNIVQSCFPLEFRLILDDKKD 443
L N S INF K I FP++ I +K D
Sbjct: 234 LFNVGSPIINFQSKSIHVQASKIRSFDFPVDVNHIAVEKVD 274
>U39470-2|AAC71118.1| 862|Caenorhabditis elegans Temporarily
assigned gene nameprotein 127 protein.
Length = 862
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 128 NLQFHLEFSLRFELLYPRRPQHKRLVVRSD 39
NL+ L LL+PR+P H+ L+ R D
Sbjct: 356 NLKLPLNLGDFMPLLHPRKPTHRTLIYRGD 385
>AL132848-3|CAB60386.1| 327|Caenorhabditis elegans Hypothetical
protein Y47H10A.4 protein.
Length = 327
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 159 FFNMSVEASDSGKSDRKLYNSVISADYDDATKRCEQLQSE 278
FFN+++E DSG+ + N V DY TK E Q +
Sbjct: 41 FFNLNIEVPDSGQGEN---NMVSFLDYISQTKCLEDAQPD 77
>AB077851-1|BAB83878.1| 814|Caenorhabditis elegans heparan sulfate
GlcNAc transferase-I/II protein.
Length = 814
Score = 28.7 bits (61), Expect = 3.8
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = +3
Query: 150 IATFFNMSVEASDSGKSDRK---LYNSVISADYDDATKRCEQLQSEPNGSYIIKNTVTEL 320
I++F + V+ SG+S+++ ++ VI + K C ++ NG T +
Sbjct: 175 ISSFMPVYVDIITSGQSEKEWLNVFQEVIPNLVETPDKACIKIHIS-NGIASPNTTFNSI 233
Query: 321 LNNAESNTINFSYKLWTTGHQNIVQSCFPLEFRLILDDKKD 443
L N S INF K I FP++ I +K D
Sbjct: 234 LFNVGSPIINFQSKSIHVQASKIRSFDFPVDVNHIAVEKVD 274
>Z99942-9|CAB17073.3| 675|Caenorhabditis elegans Hypothetical
protein C46E1.2 protein.
Length = 675
Score = 27.9 bits (59), Expect = 6.7
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Frame = +3
Query: 204 RKLYNSVISADYDDATKRCEQLQS----EPNGSYIIKNTVTELLNNAESNTI----NFSY 359
++++ +S T+R Q+ + E + +++K T+ N T + +Y
Sbjct: 156 KRVFKLDVSMTITGRTQRSVQMATGERIEEHVIFLVKTLNTDQSNEEALGTAVVQHSNNY 215
Query: 360 KLWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSKDL 497
K+ T H + + S FP + +++D +DCKI+ +LY + KDL
Sbjct: 216 KIRLT-HMDFI-STFP--YHMVVD--QDCKIVQVGRELYNHIPKDL 255
>AY652945-1|AAT73712.1| 675|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 675
Score = 27.9 bits (59), Expect = 6.7
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Frame = +3
Query: 204 RKLYNSVISADYDDATKRCEQLQS----EPNGSYIIKNTVTELLNNAESNTI----NFSY 359
++++ +S T+R Q+ + E + +++K T+ N T + +Y
Sbjct: 156 KRVFKLDVSMTITGRTQRSVQMATGERIEEHVIFLVKTLNTDQSNEEALGTAVVQHSNNY 215
Query: 360 KLWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSKDL 497
K+ T H + + S FP + +++D +DCKI+ +LY + KDL
Sbjct: 216 KIRLT-HMDFI-STFP--YHMVVD--QDCKIVQVGRELYNHIPKDL 255
>AL008867-4|CAD56232.2| 675|Caenorhabditis elegans Hypothetical
protein C46E1.2 protein.
Length = 675
Score = 27.9 bits (59), Expect = 6.7
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Frame = +3
Query: 204 RKLYNSVISADYDDATKRCEQLQS----EPNGSYIIKNTVTELLNNAESNTI----NFSY 359
++++ +S T+R Q+ + E + +++K T+ N T + +Y
Sbjct: 156 KRVFKLDVSMTITGRTQRSVQMATGERIEEHVIFLVKTLNTDQSNEEALGTAVVQHSNNY 215
Query: 360 KLWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSKDL 497
K+ T H + + S FP + +++D +DCKI+ +LY + KDL
Sbjct: 216 KIRLT-HMDFI-STFP--YHMVVD--QDCKIVQVGRELYNHIPKDL 255
>AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical
protein Y75B8A.26 protein.
Length = 1144
Score = 27.5 bits (58), Expect = 8.8
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = -3
Query: 362 FVREINCVRFGIVKQLRN-CVLYDVRTIRFG----LKLLASFGCIIVVSGND*IV*FSVG 198
F +IN +R VK LRN C+L + + L + SF C ++ S ++ + SV
Sbjct: 137 FEDQINRLRAKEVKMLRNVCILSRIVDVANAASPFLVAIGSFTCYVLWSPDENGLTPSVA 196
Query: 197 FARITCFNR 171
F +T FN+
Sbjct: 197 FVALTIFNQ 205
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,654,058
Number of Sequences: 27780
Number of extensions: 307669
Number of successful extensions: 1009
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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