Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_F16
(659 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 223 2e-57
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 204 1e-51
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 107 4e-46
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 176 3e-43
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 171 1e-41
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 138 8e-32
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 136 3e-31
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 126 5e-28
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 124 1e-27
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 123 3e-27
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 115 1e-24
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 112 8e-24
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 74 3e-12
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 46 2e-11
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 70 6e-11
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 65 1e-09
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 42 2e-08
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 56 6e-07
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 55 1e-06
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 46 2e-06
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 42 0.013
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 31 0.035
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 38 0.16
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 37 0.49
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 36 0.86
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 31 1.5
UniRef50_A4S9L4 Cluster: Predicted protein; n=1; Ostreococcus lu... 33 6.1
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 223 bits (546), Expect = 2e-57
Identities = 103/151 (68%), Positives = 115/151 (76%)
Frame = +3
Query: 177 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 356
QDKNKYNTPKYRLIVRLSNKD+T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAA
Sbjct: 39 QDKNKYNTPKYRLIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAA 98
Query: 357 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGAR 536
Y TG E+NVEPVD+GPGAFRC+LDVGLARTTTGAR
Sbjct: 99 YCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGAR 158
Query: 537 VFGAMKGAVDGGLNVPHSIKRFLAMMQNPKS 629
VFGAMKGAVDGGLN+PHS+KRF KS
Sbjct: 159 VFGAMKGAVDGGLNIPHSVKRFPGYSAETKS 189
Score = 79.0 bits (186), Expect = 9e-14
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 169
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRL 36
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 204 bits (498), Expect = 1e-51
Identities = 92/143 (64%), Positives = 107/143 (74%)
Frame = +3
Query: 174 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 353
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 354 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 533
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 534 RVFGAMKGAVDGGLNVPHSIKRF 602
+VFGA+KGAVDGGL++PHS KRF
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRF 180
Score = 76.6 bits (180), Expect = 5e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 169
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 107 bits (257), Expect(2) = 4e-46
Identities = 46/52 (88%), Positives = 50/52 (96%)
Frame = +3
Query: 174 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVK 329
VQDKNKYNTPKYRLIVR SN+D+TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 38 VQDKNKYNTPKYRLIVRFSNRDITCQIAYSRIEGDKILCAAYSHELPRYGVK 89
Score = 100 bits (240), Expect(2) = 4e-46
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = +3
Query: 447 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 602
EYNVE V+NGPGAFRCYLDVGL RTTTGA VF AMKGAVDGGLN+PHS KRF
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRF 149
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 169
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRL 36
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 176 bits (429), Expect = 3e-43
Identities = 84/151 (55%), Positives = 100/151 (66%)
Frame = +3
Query: 174 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 353
VQDKNKYNTPKYRLIVR++NKDV Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAA
Sbjct: 38 VQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAA 97
Query: 354 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 533
AY+TG +YNVE + F+ LD+GLARTTTG+
Sbjct: 98 AYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGS 156
Query: 534 RVFGAMKGAVDGGLNVPHSIKRFLAMMQNPK 626
++F MKG DGG+NVPHS RF Q K
Sbjct: 157 KIFAVMKGVADGGINVPHSESRFFGFDQESK 187
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 169
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRL 36
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 171 bits (417), Expect = 1e-41
Identities = 78/151 (51%), Positives = 97/151 (64%)
Frame = +3
Query: 177 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 356
QDKNKYN+PKYR +VR +N+DV CQV Y+ + GD +CAAYSHELP+YG+K GLTNYAA
Sbjct: 48 QDKNKYNSPKYRFVVRFTNRDVVCQVVYATLSGDVTICAAYSHELPKYGMKAGLTNYAAT 107
Query: 357 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGAR 536
Y+TG +Y+VE D F+C+LD GL RT+TGAR
Sbjct: 108 YATGLLCARRLLTKYGLADAYEGKTEDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGAR 167
Query: 537 VFGAMKGAVDGGLNVPHSIKRFLAMMQNPKS 629
VF A+KGAVDGGL++PH+ KRF KS
Sbjct: 168 VFAALKGAVDGGLDIPHNEKRFAGYDLQDKS 198
Score = 39.5 bits (88), Expect = 0.070
Identities = 21/33 (63%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +2
Query: 77 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRL 169
V K Y RYQVKF RRR G KTDY AR+RL
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRL 45
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 138 bits (335), Expect = 8e-32
Identities = 69/149 (46%), Positives = 89/149 (59%), Gaps = 6/149 (4%)
Frame = +3
Query: 174 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 353
+QDK K+ +PKYRL+VR++NKD+ Q+ ++I GD +V AAY+HELP +G++ GLTNYAA
Sbjct: 61 LQDKTKFGSPKYRLVVRITNKDIIAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAA 120
Query: 354 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPG------AFRCYLDVGLA 515
AY+TG V + G F+ LDVGLA
Sbjct: 121 AYATGLLLARRTLAKLGIADKFQGAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGLA 180
Query: 516 RTTTGARVFGAMKGAVDGGLNVPHSIKRF 602
RTTTGARVFG +KGAVDGG+ VPH RF
Sbjct: 181 RTTTGARVFGVLKGAVDGGMAVPHRPNRF 209
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/36 (75%), Positives = 34/36 (94%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 169
M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQM 59
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 136 bits (330), Expect = 3e-31
Identities = 63/143 (44%), Positives = 84/143 (58%)
Frame = +3
Query: 174 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 353
+QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CAA S+EL R+GV GL +YAA
Sbjct: 327 IQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCAADSYELKRFGVSTGLASYAA 386
Query: 354 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 533
AY+TG +NV+ F+ LD GL RTTTG
Sbjct: 387 AYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTGN 446
Query: 534 RVFGAMKGAVDGGLNVPHSIKRF 602
RVFG +KGA DGG+N+PHS RF
Sbjct: 447 RVFGVLKGACDGGINIPHSESRF 469
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 154
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 126 bits (304), Expect = 5e-28
Identities = 69/159 (43%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Frame = +3
Query: 135 KGKLIIMLVNASXVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELP 314
+GK A +QDKNKYN K R IVR +N + CQ+A S IEGD I+ A S EL
Sbjct: 25 EGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQIICQIASSHIEGDKILSEAKSKELI 84
Query: 315 RYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGA 485
RYG+ VGL NYAAAY+TG E + +
Sbjct: 85 RYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFIGVEKVTSESVAEDGDKEEEGDRKP 144
Query: 486 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 602
+ +LDVG+ RTTTG RVF A+KGA DGGLN+PH RF
Sbjct: 145 IKAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGNNRF 183
Score = 65.7 bits (153), Expect = 9e-10
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 169
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKAL 36
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 124 bits (300), Expect = 1e-27
Identities = 64/141 (45%), Positives = 82/141 (58%)
Frame = +3
Query: 177 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 356
QDK KY KYRL+ R++N V Q+ + + GD VC A S ELP+YG+K+GL+NY AA
Sbjct: 38 QDKTKYGAAKYRLVARITNTKVIAQIVVAELTGDKTVCQALSTELPKYGIKLGLSNYPAA 97
Query: 357 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGAR 536
Y+TG EY + + P F+ LDVGLARTTTGA+
Sbjct: 98 YATG---LLVARRFLTQMKLADVFKTEITEEYLNDEENRRP--FKVILDVGLARTTTGAK 152
Query: 537 VFGAMKGAVDGGLNVPHSIKR 599
VF MKGAVDGGL +PH++ R
Sbjct: 153 VFAVMKGAVDGGLFIPHNVCR 173
Score = 47.2 bits (107), Expect = 3e-04
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +2
Query: 74 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 169
K+VKN YF R+Q KF+RRRE KTDY R +L
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQL 35
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 123 bits (297), Expect = 3e-27
Identities = 63/143 (44%), Positives = 86/143 (60%)
Frame = +3
Query: 174 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 353
VQDK+KYN+PKYR +VR +N + CQV Y+ ++GD +V AA S EL R+G+ GLTNYAA
Sbjct: 38 VQDKDKYNSPKYRFVVRHTNTKIICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAA 97
Query: 354 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 533
AY+TG + N++ P F LD+GL R+T G
Sbjct: 98 AYATGLLLARRTLKTLKMDKFYEGNKTI---DGNLKTQRERP--FFAVLDIGLVRSTLGN 152
Query: 534 RVFGAMKGAVDGGLNVPHSIKRF 602
RVF A+KGA DGG+++PH+ +RF
Sbjct: 153 RVFAALKGAADGGIHIPHNNRRF 175
Score = 63.3 bits (147), Expect = 5e-09
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLXCSGQEQ 190
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL +++
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDK 43
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 115 bits (276), Expect = 1e-24
Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 1/143 (0%)
Frame = +3
Query: 177 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 356
QD N + K+RL+VR++ V CQ+ + ++GD ++ A S EL RYG+ G TNY+AA
Sbjct: 33 QDSNSCGSVKHRLVVRITGSRVICQIVAAYMDGDRVMVYADSRELERYGINFGATNYSAA 92
Query: 357 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNV-EPVDNGPGAFRCYLDVGLARTTTGA 533
Y+TG Y+V + +D A R +LD+GLAR+T GA
Sbjct: 93 YATGFLIGRRALTAMSLDEVYRPKEIDGT--YSVTKDIDGEKKAPRVFLDIGLARSTRGA 150
Query: 534 RVFGAMKGAVDGGLNVPHSIKRF 602
RVFGA+KGA D GLNVPHS +F
Sbjct: 151 RVFGALKGASDAGLNVPHSAAKF 173
Score = 36.3 bits (80), Expect = 0.65
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 89 KQYFKRYQVKFKRRREGKTDYYARKRL 169
+ Y K +QVK +RRREGKTDY R +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNM 30
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 112 bits (269), Expect = 8e-24
Identities = 60/126 (47%), Positives = 71/126 (56%)
Frame = +3
Query: 225 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 404
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 405 XXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 584
Y+VE +N F+ LDVG+ TTG RVFGA+KGA DGGL+VP
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVP 123
Query: 585 HSIKRF 602
HS KRF
Sbjct: 124 HSEKRF 129
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +3
Query: 213 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 368
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +3
Query: 507 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 602
GLARTTTG +VFGA+K VD GL++PHS K F
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCF 102
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 45.6 bits (103), Expect(2) = 2e-11
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +3
Query: 204 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHEL-PRYGVKVGLTNYAAAYSTG 368
K R+ VR+SN+ + Q +RIEGD ++ AA+S EL ++G K N AAY TG
Sbjct: 32 KPRMAVRISNEYLWVQFLEARIEGDRVIAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
Score = 45.6 bits (103), Expect(2) = 2e-11
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 480 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 590
G LDVGL + G+RVF A+KGA+D G+ +PHS
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHS 134
Score = 39.1 bits (87), Expect = 0.093
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 104 RYQVKFKRRREGKTDYYARKRLXCSGQEQI 193
RY+V +RRREGKT+YY R RL SG+ ++
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLVKSGKPRM 35
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 69.7 bits (163), Expect = 6e-11
Identities = 41/148 (27%), Positives = 67/148 (45%)
Frame = +3
Query: 177 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 356
QDK K+ K R+I+R S ++++ Q+ S ++GD I+ ++Y L + K NY +
Sbjct: 39 QDKKKFENKKKRIIIRFSKRNLSLQMVNSNVDGDFILLSSYLKNLSKLEYKNLTNNYPFS 98
Query: 357 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGAR 536
Y G YN + N +D+GL R T G +
Sbjct: 99 YLLGYYFGKDLIEKVKQSET-----------YNKK---NYSSKITAIIDIGLKRATIGNK 144
Query: 537 VFGAMKGAVDGGLNVPHSIKRFLAMMQN 620
F +MKG+VD G+N+PH+ + + N
Sbjct: 145 SFASMKGSVDSGINIPHNYNKIFKVKNN 172
Score = 33.5 bits (73), Expect = 4.6
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 86 NKQYFKRYQVKFKRRREGKTDYYARKRL 169
N Y R+++K +RRR GKTDY R +L
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKL 36
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 65.3 bits (152), Expect = 1e-09
Identities = 45/126 (35%), Positives = 63/126 (50%)
Frame = +3
Query: 210 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXX 389
R++VR +N+ + Q+ +EGD + AAYS EL YG + + AAY TG
Sbjct: 34 RMVVRKTNRQIIVQLVVPEVEGDSTLVAAYSAELAGYGYEGSTASTPAAYLTGML----- 88
Query: 390 XXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDG 569
+ V+ ++ G G LD+GLAR GARVF A+KGAVD
Sbjct: 89 --------------------FAVKALNAGYG--EAILDIGLARAKPGARVFAALKGAVDA 126
Query: 570 GLNVPH 587
GL+VP+
Sbjct: 127 GLDVPY 132
Score = 38.3 bits (85), Expect = 0.16
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +2
Query: 104 RYQVKFKRRREGKTDYYARKRLXCSG 181
RY V F+RR EGKTDYY R L SG
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSSG 31
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 41.5 bits (93), Expect(2) = 2e-08
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 480 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 590
G LD+GL T G++VF +GA+D GL++PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
Score = 39.5 bits (88), Expect(2) = 2e-08
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 204 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 368
K RL+ R SNK V Q+ GD + +A+S +L YG + N +AY TG
Sbjct: 32 KPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTG 86
Score = 36.3 bits (80), Expect = 0.65
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +2
Query: 104 RYQVKFKRRREGKTDYYARKRLXCSGQEQI 193
RY+V +RRRE +TDY+ R RL SG+ ++
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLLKSGKPRL 35
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 56.4 bits (130), Expect = 6e-07
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = +3
Query: 447 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFLAMMQNPK 626
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF+ ++ K
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3
Query: 177 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 278
QDKNKYNTPKYR +VR +NKD+T Q+ + I GD
Sbjct: 50 QDKNKYNTPKYRFVVRFTNKDITAQIISASIAGD 83
Score = 52.4 bits (120), Expect = 9e-06
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 169
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRL 47
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 46.4 bits (105), Expect(2) = 2e-06
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3
Query: 480 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 587
G LDVGLA T+G RVF A++G VD GL++PH
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPH 135
Score = 28.3 bits (60), Expect(2) = 2e-06
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +3
Query: 210 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHEL-PRYG--VKVGLTNYAAAYSTG 368
R +VR+SN TCQ+ GD ++ + L R+G + + A+Y TG
Sbjct: 34 RAVVRVSNTQTTCQLINYDSTGDEVIISVTGKTLVDRFGWPLDASRKSVPASYLTG 89
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 41.9 bits (94), Expect = 0.013
Identities = 16/30 (53%), Positives = 25/30 (83%)
Frame = +2
Query: 104 RYQVKFKRRREGKTDYYARKRLXCSGQEQI 193
RY+V F+RRREG+T+Y+ R +L SGQ+++
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQDRV 35
Score = 38.3 bits (85), Expect = 0.16
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 498 LDVGLARTTTGARVFGAMKGAVDGGLNVPHS 590
LD+GL ++ G+RV+ A+KG VD G +P S
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCS 133
Score = 37.1 bits (82), Expect = 0.37
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +3
Query: 210 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 368
R++VR S ++V Q+ EGD +A S EL +YG N AAY TG
Sbjct: 34 RVVVRKSARNVQIQLLAPTPEGDITYSSAVSSELAKYGYTGATGNTTAAYLTG 86
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 30.7 bits (66), Expect(2) = 0.035
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 486 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 590
F +D+G R R+ +KG +DGG+ +P S
Sbjct: 121 FLLTIDIGFKRLNEKGRINAFIKGLIDGGIQIPVS 155
Score = 29.1 bits (62), Expect(2) = 0.035
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 204 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 368
K+R +N +++ + +S + GD IV A S +L ++G+ N +Y G
Sbjct: 48 KFRSYFTTTNTNLSGVITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLINSYFIG 102
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 38.3 bits (85), Expect = 0.16
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 110 QVKFKRRREGKTDYYARKRLXCSGQEQI*HT*ISSDCASLQQRCNMP 250
+++F+R +EGKTDYYARKRL + + +T D + QR ++P
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEY-NTPEXDDSSCNXQRYHLP 81
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 36.7 bits (81), Expect = 0.49
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 498 LDVGLARTTTGARVFGAMKGAVDGGLNVPHS 590
LD+G+ + G +++ +KGA+D GL +PH+
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHN 133
Score = 33.9 bits (74), Expect = 3.5
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 107 YQVKFKRRREGKTDYYARKRL 169
Y+V+FKRRREGKT+Y R +L
Sbjct: 7 YKVQFKRRREGKTNYNKRYKL 27
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 35.9 bits (79), Expect = 0.86
Identities = 37/127 (29%), Positives = 48/127 (37%), Gaps = 1/127 (0%)
Frame = +3
Query: 210 RLIVRLSNKDVTCQVA-YSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXX 386
R IVR++ K V QVA YS I GD I+ L +YGV + N Y G
Sbjct: 29 RFIVRITGKGVIAQVAEYSDI-GDRILFTVTDKTLAKYGVDLRGNNIQVCYLVGYIA--- 84
Query: 387 XXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVD 566
+E NG + LD G + G R+ +KG D
Sbjct: 85 ----------------------GIESEKNGVES--AVLDTGRRKFRKGGRIAACLKGFTD 120
Query: 567 GGLNVPH 587
G+ VPH
Sbjct: 121 AGIEVPH 127
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 30.7 bits (66), Expect(2) = 1.5
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 219 VRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 368
V +SN++ Q+ +++GD ++ + +S L G K + A+Y TG
Sbjct: 33 VHISNENAQVQIHAPKMDGDVVIASGHSRYLASKGWKGSRKSIPASYLTG 82
Score = 23.4 bits (48), Expect(2) = 1.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 480 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 584
GA + G R T R+ A+KG D G++VP
Sbjct: 93 GAKSAIMYTGTRRYTD--RISAALKGVSDAGVDVP 125
>UniRef50_A4S9L4 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 646
Score = 33.1 bits (72), Expect = 6.1
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = -2
Query: 655 CEPCVLQH*LFGFCIIARNLLME*GTLRPPSTAPFIAPKTRAPVVVRAKPT 503
C+PCV +H +GF + G P+TAP A T AP V+A PT
Sbjct: 241 CDPCVCEH--YGFSTGCAGMPTPEGLESTPTTAPVQATPTTAP--VQATPT 287
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,868,880
Number of Sequences: 1657284
Number of extensions: 12469738
Number of successful extensions: 31757
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 30572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31741
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -