Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_F14
         (453 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43283-7|AAC69018.1|  537|Caenorhabditis elegans Hypothetical pr...    30   0.69 
U64836-1|AAX22289.1|  321|Caenorhabditis elegans Serpentine rece...    29   2.1  
Z82075-2|CAB60333.1|  328|Caenorhabditis elegans Hypothetical pr...    28   2.8  
Z68315-12|CAA92673.1|  345|Caenorhabditis elegans Hypothetical p...    27   4.8  
U67953-2|AAL13327.1|  340|Caenorhabditis elegans Hypothetical pr...    27   4.8  
U67953-1|AAQ91892.1|  398|Caenorhabditis elegans Hypothetical pr...    27   4.8  
U28971-5|AAA68379.1|  982|Caenorhabditis elegans Hypothetical pr...    27   4.8  
AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid deplet...    27   4.8  
Z93397-2|CAB07717.2|  505|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z81513-6|CAB04176.1|  341|Caenorhabditis elegans Hypothetical pr...    27   8.4  
AC084155-1|AAG23361.2|  352|Caenorhabditis elegans Hypothetical ...    27   8.4  
AC006608-10|AAF39754.1|  801|Caenorhabditis elegans Hypothetical...    27   8.4  

>U43283-7|AAC69018.1|  537|Caenorhabditis elegans Hypothetical
           protein T25G12.2 protein.
          Length = 537

 Score = 30.3 bits (65), Expect = 0.69
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 221 FFFSILHFEIFVFYHNVNCSFCKTD*NVCACFKNC 325
           FFF I++F+I  F+   NC F     ++    KNC
Sbjct: 10  FFFEIVNFQIEFFFSKKNCFFRTMSGSLQEVLKNC 44


>U64836-1|AAX22289.1|  321|Caenorhabditis elegans Serpentine
           receptor, class x protein92, isoform b protein.
          Length = 321

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 367 VFLPTPAKAILCIMNKTIMIVFLY 438
           VFLPT    I  + N TI++VF+Y
Sbjct: 115 VFLPTKYATIFSLFNITIILVFIY 138


>Z82075-2|CAB60333.1|  328|Caenorhabditis elegans Hypothetical
           protein W07A8.5 protein.
          Length = 328

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +3

Query: 81  FIIFAHLCLIFRFFFVYVTIFSTKD 155
           FII A L LIF FF ++ TI    D
Sbjct: 16  FIIVASLLLIFEFFLLFATISHRND 40


>Z68315-12|CAA92673.1|  345|Caenorhabditis elegans Hypothetical
           protein F28C6.9 protein.
          Length = 345

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 161 RPNLTDSKHFNITILNPKFVFFFSILHF 244
           +P +  SKHF +  ++ K +  F+ILHF
Sbjct: 37  KPGVFSSKHFKMYKMHLKCITCFNILHF 64


>U67953-2|AAL13327.1|  340|Caenorhabditis elegans Hypothetical
           protein ZC13.1a protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 33  LSLNRRLFKIALYFSFFIIFAHLCLIFRFFFVYVTIFSTKDYFGQ 167
           +S+ + +F     F+   +F HL  IF+F  VY+ IF   D   Q
Sbjct: 112 VSITKSIFPFLALFAANFVFDHLYEIFQFIVVYL-IFVQADVIVQ 155


>U67953-1|AAQ91892.1|  398|Caenorhabditis elegans Hypothetical
           protein ZC13.1b protein.
          Length = 398

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 33  LSLNRRLFKIALYFSFFIIFAHLCLIFRFFFVYVTIFSTKDYFGQ 167
           +S+ + +F     F+   +F HL  IF+F  VY+ IF   D   Q
Sbjct: 112 VSITKSIFPFLALFAANFVFDHLYEIFQFIVVYL-IFVQADVIVQ 155


>U28971-5|AAA68379.1|  982|Caenorhabditis elegans Hypothetical
           protein B0244.6 protein.
          Length = 982

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 12/41 (29%)
 Frame = +3

Query: 54  FKIALYFSF---------FIIFAHLCLIFR---FFFVYVTI 140
           F I LYFSF         FII A +CL+F     FFV++++
Sbjct: 412 FTICLYFSFGNLFDFIGNFIIIASVCLVFTIAILFFVFISL 452


>AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid depleted
           protein 3 protein.
          Length = 1599

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +2

Query: 209 PKFVFFFSILHFEI 250
           PK +FFFS LHF+I
Sbjct: 495 PKILFFFSYLHFQI 508


>Z93397-2|CAB07717.2|  505|Caenorhabditis elegans Hypothetical
           protein ZC482.3 protein.
          Length = 505

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
 Frame = +2

Query: 182 KHFNITILNPKFVFFFSILHFEIF--VFYHNVNCSFCKTD*NVCACFKNCVVLKFEAFDV 355
           K+FN   LNP F    S + + +F  +   N+    C T+      ++NC+   FE+   
Sbjct: 290 KYFNFENLNPDFCLTLSEMRYFLFYGISTINIQAKLC-TNPGKLDDYQNCI---FESMSK 345

Query: 356 LHTWCFCLL 382
           L   C  ++
Sbjct: 346 LPEICLVII 354


>Z81513-6|CAB04176.1|  341|Caenorhabditis elegans Hypothetical
           protein F26D2.7 protein.
          Length = 341

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 99  LCLIFRFFFVYVTIFSTKDYFG 164
           +C I  F  +Y+T+F +K  +G
Sbjct: 17  ICFITNFILIYITLFHSKRIYG 38


>AC084155-1|AAG23361.2|  352|Caenorhabditis elegans Hypothetical
           protein Y45G5AM.6 protein.
          Length = 352

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -1

Query: 375 QKHQVCKTSNASNLSTTQFLKQAHTFQSVLQKLQFTL 265
           ++H +C T+N +N+   Q++ +    +S L+    TL
Sbjct: 181 RRHCICNTANCNNVYNFQYIARDREKESSLRSRSLTL 217


>AC006608-10|AAF39754.1|  801|Caenorhabditis elegans Hypothetical
           protein C15F1.2 protein.
          Length = 801

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 215 FVFFFSILHFEIFVFYHNVNCSFCKTD*NVCACFKNCVVL 334
           F+FF  +L   IF  Y + + S      N CA F  C  +
Sbjct: 4   FLFFLLVLFQSIFAQYESPDPSSPAPSSNYCAAFVECAAV 43


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,991,859
Number of Sequences: 27780
Number of extensions: 170165
Number of successful extensions: 629
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)