Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_F03
(549 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46778 Cluster: 60S ribosomal protein L21; n=329; Fungi... 212 4e-54
UniRef50_Q7PZX9 Cluster: ENSANGP00000014054; n=2; Culicidae|Rep:... 209 3e-53
UniRef50_Q02753 Cluster: 60S ribosomal protein L21-A; n=31; Euka... 185 5e-46
UniRef50_Q4KTG5 Cluster: L21; n=2; Metazoa|Rep: L21 - Suberites ... 182 5e-45
UniRef50_Q43291 Cluster: 60S ribosomal protein L21-1; n=24; Euka... 161 7e-39
UniRef50_Q7XYA8 Cluster: 60S ribosome protein L21; n=1; Griffith... 144 9e-34
UniRef50_Q7R5F3 Cluster: GLP_165_41283_41762; n=3; Eukaryota|Rep... 139 4e-32
UniRef50_UPI0000E24650 Cluster: PREDICTED: similar to Ribosomal ... 132 5e-30
UniRef50_Q7REC3 Cluster: Ribosomal protein L21e, putative; n=5; ... 129 5e-29
UniRef50_A2F2S5 Cluster: Ribosomal protein L21e, putative; n=6; ... 129 5e-29
UniRef50_A3E3H5 Cluster: 60S ribosomal protein I21; n=3; Alveola... 127 1e-28
UniRef50_Q5CX53 Cluster: 60s ribosomal protein L21; n=3; Cryptos... 123 2e-27
UniRef50_P38653 Cluster: 60S ribosomal protein L21; n=2; Entamoe... 121 1e-26
UniRef50_Q23TC8 Cluster: 60S ribosomal protein L21, putative; n=... 119 5e-26
UniRef50_UPI0000DD8153 Cluster: PREDICTED: similar to ribosomal ... 81 1e-24
UniRef50_Q8SRW8 Cluster: 60S ribosomal protein L21; n=1; Encepha... 113 3e-24
UniRef50_Q1KYN7 Cluster: RPL21; n=1; Streblomastix strix|Rep: RP... 111 1e-23
UniRef50_Q4QEX4 Cluster: 60S ribosomal protein l21, putative; n=... 104 2e-21
UniRef50_UPI0001553B37 Cluster: PREDICTED: similar to ribosomal ... 96 4e-19
UniRef50_A6RC90 Cluster: 60s ribosomal protein l21; n=1; Ajellom... 87 3e-16
UniRef50_UPI0000D9A1A6 Cluster: PREDICTED: similar to 60S riboso... 70 3e-11
UniRef50_UPI0000DA1EED Cluster: PREDICTED: similar to 60S riboso... 69 7e-11
UniRef50_Q9AW28 Cluster: 60S ribosomal protein L21; n=1; Guillar... 68 2e-10
UniRef50_Q9SHE5 Cluster: T19E23.15; n=1; Arabidopsis thaliana|Re... 64 3e-09
UniRef50_A4D227 Cluster: Similar to 60S RIBOSOMAL PROTEIN L21; n... 55 1e-06
UniRef50_Q64E17 Cluster: Ribosomal protein L21E; n=3; environmen... 54 3e-06
UniRef50_UPI0000DC1311 Cluster: UPI0000DC1311 related cluster; n... 51 2e-05
UniRef50_Q9M2R5 Cluster: Putative uncharacterized protein T10K17... 50 4e-05
UniRef50_Q4JB11 Cluster: 50S ribosomal protein L21e; n=8; Archae... 49 8e-05
UniRef50_Q9UXE0 Cluster: 50S ribosomal protein L21e; n=6; Thermo... 46 6e-04
UniRef50_Q42194 Cluster: 60S ribosomal protein L21; n=10; Magnol... 41 0.022
UniRef50_O28743 Cluster: 50S ribosomal protein L21e; n=5; Euryar... 39 0.088
UniRef50_Q75F53 Cluster: AAL125Wp; n=1; Eremothecium gossypii|Re... 38 0.12
UniRef50_O74001 Cluster: 50S ribosomal protein L21e; n=15; Archa... 37 0.35
UniRef50_Q0IEM3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.62
UniRef50_Q8PU21 Cluster: 50S ribosomal protein L21e; n=7; Euryar... 36 0.82
UniRef50_UPI0000E1FC07 Cluster: PREDICTED: hypothetical protein;... 35 1.1
UniRef50_Q5MGB3 Cluster: Transposase; n=1; Phytophthora infestan... 35 1.1
UniRef50_A5BFS9 Cluster: Putative uncharacterized protein; n=15;... 35 1.4
UniRef50_A0RUT3 Cluster: Ribosomal protein L21E; n=2; Thermoprot... 35 1.4
UniRef50_A0BGP7 Cluster: Chromosome undetermined scaffold_106, w... 34 1.9
UniRef50_Q1E5R4 Cluster: Putative uncharacterized protein; n=2; ... 34 1.9
UniRef50_Q6L228 Cluster: 50S ribosomal protein L21e; n=2; Thermo... 34 1.9
UniRef50_A5FGL8 Cluster: ABC transporter related; n=1; Flavobact... 34 2.5
UniRef50_A7TAZ0 Cluster: Predicted protein; n=1; Nematostella ve... 34 2.5
UniRef50_Q9U344 Cluster: Putative uncharacterized protein; n=4; ... 33 3.3
UniRef50_Q0YGP7 Cluster: Orn/DAP/Arg decarboxylase 2; n=3; Desul... 33 4.4
UniRef50_Q4WRE2 Cluster: SWR1-complex protein 5; n=7; Trichocoma... 33 4.4
UniRef50_A7HA29 Cluster: Rod shape-determining protein MreC prec... 32 7.6
UniRef50_P08478 Cluster: Peptidyl-glycine alpha-amidating monoox... 32 7.6
>UniRef50_P46778 Cluster: 60S ribosomal protein L21; n=329;
Fungi/Metazoa group|Rep: 60S ribosomal protein L21 -
Homo sapiens (Human)
Length = 160
Score = 212 bits (518), Expect = 4e-54
Identities = 94/141 (66%), Positives = 116/141 (82%), Gaps = 1/141 (0%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKR 283
R HG +PL+TYM++YK GDIVDI+G G VQKGMPHK YHGKTGRVYNVT HA+G++VNK+
Sbjct: 20 RKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQ 79
Query: 284 VRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAH 463
V+G+I+ KRIN+R+EH+KHSK R FLKRVKEN++ KEAK G V LKRQPAPP+ AH
Sbjct: 80 VKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAH 139
Query: 464 IV-SGTEKPVLLAPIPYEFVA 523
V + ++P LL PIPYEF+A
Sbjct: 140 FVRTNGKEPELLEPIPYEFMA 160
>UniRef50_Q7PZX9 Cluster: ENSANGP00000014054; n=2; Culicidae|Rep:
ENSANGP00000014054 - Anopheles gambiae str. PEST
Length = 162
Score = 209 bits (511), Expect = 3e-53
Identities = 97/143 (67%), Positives = 118/143 (82%), Gaps = 3/143 (2%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKR 283
R HGTIPLSTYMK+YK GD VDI+G+GAV KGMP+K YHGKTGRVYNV+ HALGVIVNKR
Sbjct: 20 RKHGTIPLSTYMKIYKSGDYVDIKGHGAVHKGMPYKAYHGKTGRVYNVSKHALGVIVNKR 79
Query: 284 VRGRIIPKRINIRVEHVKHSKCRQDFLKRVKEN--ERL-LKEAKAAGKTVNLKRQPAPPK 454
VRG+I+PKRIN+RVEHV+ S+CR+DFL+RVKEN +R+ L+ K G V+LKR+P P+
Sbjct: 80 VRGKILPKRINVRVEHVQPSRCREDFLRRVKENVEKRMALRGKKLPGFKVSLKRKPKQPR 139
Query: 455 AAHIVSGTEKPVLLAPIPYEFVA 523
A ++ KP+ LAPIPYEFVA
Sbjct: 140 QAQVIKNPPKPIFLAPIPYEFVA 162
>UniRef50_Q02753 Cluster: 60S ribosomal protein L21-A; n=31;
Eukaryota|Rep: 60S ribosomal protein L21-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 160
Score = 185 bits (451), Expect = 5e-46
Identities = 87/138 (63%), Positives = 104/138 (75%), Gaps = 1/138 (0%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKR 283
R HG + LSTY+KVYKVGDIVDI+ NG++QKGMPHK Y GKTG VYNVT ++GVI+NK
Sbjct: 20 RKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKM 79
Query: 284 VRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAH 463
V R + KR+N+RVEH+KHSKCRQ+FL+RVK N EAKA G V LKRQPA P+ +
Sbjct: 80 VGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESR 139
Query: 464 IVSGT-EKPVLLAPIPYE 514
IVS P LAP+PYE
Sbjct: 140 IVSTEGNVPQTLAPVPYE 157
>UniRef50_Q4KTG5 Cluster: L21; n=2; Metazoa|Rep: L21 - Suberites
domuncula (Sponge)
Length = 160
Score = 182 bits (443), Expect = 5e-45
Identities = 86/141 (60%), Positives = 107/141 (75%), Gaps = 1/141 (0%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKR 283
+ +G LSTYMKVYKVGDIVD++GNGA KGMP+K YHGKTG+VYNVT A+GVIVNK
Sbjct: 20 KKNGVQHLSTYMKVYKVGDIVDVKGNGAFHKGMPYKFYHGKTGKVYNVTKRAVGVIVNKP 79
Query: 284 VRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQP-APPKAA 460
+R +I+ KRIN+R+EHVKHS+CR+DFL RVK NE A+ G+ V KR P AP KA+
Sbjct: 80 LRNKILQKRINVRIEHVKHSRCREDFLSRVKLNEEKKHAARERGEKVVCKRMPLAPRKAS 139
Query: 461 HIVSGTEKPVLLAPIPYEFVA 523
+ ++P L+ PIPYEFVA
Sbjct: 140 FVKMQGKEPELVEPIPYEFVA 160
>UniRef50_Q43291 Cluster: 60S ribosomal protein L21-1; n=24;
Eukaryota|Rep: 60S ribosomal protein L21-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 164
Score = 161 bits (392), Expect = 7e-39
Identities = 74/139 (53%), Positives = 100/139 (71%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKR 283
R G IPLSTY++ +KVGD VD++ NGA+ KGMPHK YHG+TGR++NVT A+GV VNK+
Sbjct: 20 RKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQ 79
Query: 284 VRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAH 463
+ RII KRI++RVEHV+ S+C ++F R K+N+ L AKA G+T++ KRQP PK
Sbjct: 80 IGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTKRQPKGPKPGF 139
Query: 464 IVSGTEKPVLLAPIPYEFV 520
+V G + PIPY+ V
Sbjct: 140 MVEGMTLET-VTPIPYDVV 157
>UniRef50_Q7XYA8 Cluster: 60S ribosome protein L21; n=1; Griffithsia
japonica|Rep: 60S ribosome protein L21 - Griffithsia
japonica (Red alga)
Length = 159
Score = 144 bits (350), Expect = 9e-34
Identities = 74/140 (52%), Positives = 96/140 (68%), Gaps = 1/140 (0%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKR 283
R G STY++V+K+G+ VDI N + KGMPHK YHG+TGRV+NV+ A+GV V+KR
Sbjct: 20 RKSGNEHTSTYLQVFKIGEYVDIHINPTIMKGMPHKFYHGRTGRVFNVSRTAVGVEVSKR 79
Query: 284 VRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAG-KTVNLKRQPAPPKAA 460
VR RII KR +IR+EHV+ S+C +DFL R K E +EA G K +KR PA P+ A
Sbjct: 80 VRHRIINKRFHIRIEHVRKSQCNKDFLDRCKLREIEAQEAHKRGEKYTVVKRTPALPRDA 139
Query: 461 HIVSGTEKPVLLAPIPYEFV 520
H+V+ E L+ PIPYEFV
Sbjct: 140 HLVTAGEME-LVEPIPYEFV 158
>UniRef50_Q7R5F3 Cluster: GLP_165_41283_41762; n=3; Eukaryota|Rep:
GLP_165_41283_41762 - Giardia lamblia ATCC 50803
Length = 159
Score = 139 bits (336), Expect = 4e-32
Identities = 69/140 (49%), Positives = 96/140 (68%), Gaps = 1/140 (0%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKR 283
R HG L+TY +VYK+G V+I+ NGA KGMPH+ Y+G+TG ++N+ ALGV + KR
Sbjct: 20 RRHGMANLTTYNRVYKLGQYVNIKVNGAYHKGMPHRYYNGRTGTIFNIGPRALGVQIQKR 79
Query: 284 VRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVN-LKRQPAPPKAA 460
VRGRI+ KRIN+R+EHV S CR++ L+RV N+ + AK G+ V LKRQ A P+AA
Sbjct: 80 VRGRIMLKRINVRLEHVHPSDCRKNHLERVAANDAARRLAKETGQPVPCLKRQNALPRAA 139
Query: 461 HIVSGTEKPVLLAPIPYEFV 520
H+VS + + P+ Y+ V
Sbjct: 140 HVVS-IASAIDITPLKYDGV 158
>UniRef50_UPI0000E24650 Cluster: PREDICTED: similar to Ribosomal
protein L21; n=1; Pan troglodytes|Rep: PREDICTED:
similar to Ribosomal protein L21 - Pan troglodytes
Length = 234
Score = 132 bits (319), Expect = 5e-30
Identities = 66/140 (47%), Positives = 91/140 (65%), Gaps = 1/140 (0%)
Frame = +2
Query: 107 THGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRV 286
+HG+IP + V GDIVDI+G GAVQKG+PHK +HGKT + A+G++ NK
Sbjct: 98 SHGSIPNPKGISVVAEGDIVDIKGMGAVQKGIPHKHFHGKTQKSLQCYQQAVGIVGNK-- 155
Query: 287 RGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHI 466
G+ + K++N+ +EH+KHS+ FLK +K N++ K+AK V LKRQPAPP+ A I
Sbjct: 156 -GKNLVKKMNVLIEHIKHSESWNHFLKHIKINDQKKKDAKEKSMWVQLKRQPAPPREARI 214
Query: 467 VSGTEK-PVLLAPIPYEFVA 523
V K LL P+PYEF+A
Sbjct: 215 VKTNGKASELLEPVPYEFIA 234
>UniRef50_Q7REC3 Cluster: Ribosomal protein L21e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L21e, putative -
Plasmodium yoelii yoelii
Length = 161
Score = 129 bits (311), Expect = 5e-29
Identities = 59/137 (43%), Positives = 91/137 (66%), Gaps = 1/137 (0%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKR 283
R HG + Y++ GD VDI + + QKGMP YHG+TG+V+++T +GV+VNKR
Sbjct: 21 RKHGECTANKYLENINYGDYVDIVCDSSQQKGMPFNFYHGRTGKVFHITKRGVGVLVNKR 80
Query: 284 VRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPK-AA 460
VR RII K++ +R+EHV+ S+C +DF+ R K+N+ L+KEAK + +++KR+ PK AA
Sbjct: 81 VRHRIIQKKVCVRIEHVRKSRCNEDFILRKKKNQELIKEAKLKNERISVKRKTEGPKPAA 140
Query: 461 HIVSGTEKPVLLAPIPY 511
I K + + P+P+
Sbjct: 141 MIQVPPSKLITVEPLPF 157
>UniRef50_A2F2S5 Cluster: Ribosomal protein L21e, putative; n=6;
Trichomonas vaginalis G3|Rep: Ribosomal protein L21e,
putative - Trichomonas vaginalis G3
Length = 159
Score = 129 bits (311), Expect = 5e-29
Identities = 64/135 (47%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKR 283
R HG S ++ +++GDIVDI+ NGA+ GMP++VYHG TG V+NV+ HA+G++V +R
Sbjct: 20 RKHGAPAPSITLRTFRIGDIVDIKVNGALHSGMPNRVYHGATGIVWNVSPHAVGILVKRR 79
Query: 284 VRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNL-KRQPAPPKAA 460
V I PKRI +R EHV SK + DF+ R + N + +EAK AG + L KR PA P+A+
Sbjct: 80 VNNHIAPKRIYVRTEHVFPSKSKNDFVARCQANLKAHEEAKKAGTKIALPKRLPAQPRAS 139
Query: 461 HIVSGTEKPVLLAPI 505
H+V KP L+ I
Sbjct: 140 HVV----KPELIQTI 150
>UniRef50_A3E3H5 Cluster: 60S ribosomal protein I21; n=3;
Alveolata|Rep: 60S ribosomal protein I21 - Pfiesteria
piscicida
Length = 165
Score = 127 bits (307), Expect = 1e-28
Identities = 63/137 (45%), Positives = 88/137 (64%), Gaps = 1/137 (0%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKR 283
RT G S YM V++ GD VDI + +VQ GMPH YHG+TG V+NV +ALGV + K
Sbjct: 24 RTKGLPGTSRYMAVFRRGDYVDICVDSSVQVGMPHSFYHGRTGIVFNVNRNALGVEITKI 83
Query: 284 VRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAH 463
V R + KRI++ + HV+ S+C + FL+RVKEN++ ++AK G + KRQP PK
Sbjct: 84 VGNRQLRKRIHVNIAHVRKSRCNEAFLRRVKENDQKKRDAKLQGLKIVCKRQPVGPKEMK 143
Query: 464 IVSGTEKPV-LLAPIPY 511
IV + V +LAP+P+
Sbjct: 144 IVKAEDDDVEVLAPLPF 160
>UniRef50_Q5CX53 Cluster: 60s ribosomal protein L21; n=3;
Cryptosporidium|Rep: 60s ribosomal protein L21 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 123 bits (297), Expect = 2e-27
Identities = 66/131 (50%), Positives = 81/131 (61%), Gaps = 1/131 (0%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKR 283
R G LS Y+K KVGD VDI + ++ KGMP+ YHG+TG VYNV ALGVIVNK
Sbjct: 20 RQKGVPMLSRYLKPIKVGDYVDIVVDSSIHKGMPYHFYHGRTGVVYNVAPRALGVIVNKV 79
Query: 284 VRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAG-KTVNLKRQPAPPKAA 460
V R I KRIN+R+EHV+ S+C +DFLKRVK N+ EA AG + KR P P+
Sbjct: 80 VGNRQIAKRINVRIEHVRLSRCNEDFLKRVKANDAARHEAHVAGLPSPVTKRVPQLPREG 139
Query: 461 HIVSGTEKPVL 493
V + VL
Sbjct: 140 GFVDCSNMEVL 150
>UniRef50_P38653 Cluster: 60S ribosomal protein L21; n=2; Entamoeba
histolytica|Rep: 60S ribosomal protein L21 - Entamoeba
histolytica
Length = 166
Score = 121 bits (292), Expect = 1e-26
Identities = 63/145 (43%), Positives = 91/145 (62%), Gaps = 8/145 (5%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKR 283
R HG ST + YKVGD V I N ++Q G+P+K +HGKTGRV+NV HA+GV+VNK+
Sbjct: 20 RGHGLSNTSTILHTYKVGDYVTILCNSSIQHGLPYKAFHGKTGRVWNVNPHAIGVMVNKK 79
Query: 284 VRGRIIPKRINIRVEHVKHSKCRQDFLKRV-------KENERLLKEAKAAGKTVNLKRQP 442
V RI+ KR++I EH++ S C++DFL+R K+N +L KE K + KR P
Sbjct: 80 VNNRIVVKRLHISPEHIRPSGCQKDFLERKAAVAAIRKQNIQLKKEGKPL-LPLPAKRLP 138
Query: 443 APPKAAHIVSGTE-KPVLLAPIPYE 514
P+ A ++ G + K +AP+ +E
Sbjct: 139 KQPRPAELIKGADIKFTTVAPLKFE 163
>UniRef50_Q23TC8 Cluster: 60S ribosomal protein L21, putative; n=9;
Oligohymenophorea|Rep: 60S ribosomal protein L21,
putative - Tetrahymena thermophila SB210
Length = 180
Score = 119 bits (286), Expect = 5e-26
Identities = 54/124 (43%), Positives = 81/124 (65%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKR 283
+T G + +S Y+ YKVG+ VDI +G+ KGMP+K+YHG+TG+V+NV ++GVIV++
Sbjct: 43 KTKGHVRISRYLTTYKVGEYVDIMVDGSQHKGMPYKLYHGRTGKVFNVNPRSIGVIVHRI 102
Query: 284 VRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAH 463
V GR I KR+++++EHV+ S + KR + N++ E AGK V+ KR P P A
Sbjct: 103 VNGRYIEKRLHVKIEHVRPSNVKTALSKRYQANDQAKAEGNKAGKRVSTKRNPGQPLEAV 162
Query: 464 IVSG 475
V G
Sbjct: 163 QVQG 166
>UniRef50_UPI0000DD8153 Cluster: PREDICTED: similar to ribosomal
protein L21; n=1; Homo sapiens|Rep: PREDICTED: similar
to ribosomal protein L21 - Homo sapiens
Length = 125
Score = 81.0 bits (191), Expect(2) = 1e-24
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVN 277
R H +PL+ YM++ K GDI+DI+G G VQKGMPHK YHGK RVY V HA G++ N
Sbjct: 20 RKHEVVPLAMYMQICKKGDIIDIKGVGTVQKGMPHKCYHGKAERVYLVPQHAAGIVEN 77
Score = 54.4 bits (125), Expect(2) = 1e-24
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +2
Query: 371 VKENERLLKEAKAAGKTVNLKRQPAPPKAAHIV-SGTEKPVLLAPIPYEFVA 523
+ EN++ KEAK G V LKRQP PP+ A V + +KP LL P+PYEF+A
Sbjct: 74 IVENDQKKKEAKENGTWVQLKRQPPPPRKADFVRTNGKKPELLDPLPYEFMA 125
>UniRef50_Q8SRW8 Cluster: 60S ribosomal protein L21; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L21
- Encephalitozoon cuniculi
Length = 160
Score = 113 bits (272), Expect = 3e-24
Identities = 52/138 (37%), Positives = 87/138 (63%), Gaps = 2/138 (1%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKR 283
R HG +S Y++ Y++GD+VDI N A+ KGMPHK YHG+TGRVY+V +L V + KR
Sbjct: 19 RKHGVAHVSKYLEKYEIGDMVDILVNPAMMKGMPHKYYHGRTGRVYDVKPRSLNVALYKR 78
Query: 284 VRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTV--NLKRQPAPPKA 457
VRG+ + K+I +R+EHV+ S+C ++ KR+ + ++A++ G + + ++ P KA
Sbjct: 79 VRGKYVIKKIIVRIEHVRKSRCSEESQKRILMAAEMARDAESRGVVLAPSKRKIEGPRKA 138
Query: 458 AHIVSGTEKPVLLAPIPY 511
+ +P+ + P+
Sbjct: 139 VEVSLDNNQPIEVGYEPH 156
>UniRef50_Q1KYN7 Cluster: RPL21; n=1; Streblomastix strix|Rep: RPL21
- Streblomastix strix
Length = 146
Score = 111 bits (267), Expect = 1e-23
Identities = 49/110 (44%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
Frame = +2
Query: 110 HGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 289
HG S Y++ + +GD VDI+ + A+ KGMP + YHG+TGR++ + HA+G+ VNKR
Sbjct: 22 HGMPSTSRYLQKFNIGDYVDIKADSAIHKGMPFRYYHGRTGRIWALFNHAVGIEVNKRWG 81
Query: 290 GRIIPKRINIRVEHVKHSKCRQDFLKRVKEN-ERLLKEAKAAGKTVNLKR 436
RII KR+ IR+EHV+ SKCRQDFL+R K + + + + G+ V++++
Sbjct: 82 NRIIQKRVYIRIEHVRKSKCRQDFLQRCKTHAPKRVPQGPRKGQIVHIRK 131
>UniRef50_Q4QEX4 Cluster: 60S ribosomal protein l21, putative; n=10;
Trypanosomatidae|Rep: 60S ribosomal protein l21,
putative - Leishmania major
Length = 159
Score = 104 bits (249), Expect = 2e-21
Identities = 52/108 (48%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKR 283
R HG +ST + KVGD VD+ + AV++GMPHK YHG+TG V+NVT +GVI+NK
Sbjct: 20 RKHGVPSVSTILTNIKVGDYVDVVADSAVREGMPHKYYHGRTGIVWNVTPRGVGVIINKP 79
Query: 284 VRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENE-RLLKEAKAAGKTV 424
VR R + KRI +R EHV+ S+C++ F + KE++ + AK AGK +
Sbjct: 80 VRTRTLRKRICVRFEHVRKSRCQEAF--KAKEHQFQAYLAAKKAGKAL 125
>UniRef50_UPI0001553B37 Cluster: PREDICTED: similar to ribosomal
protein L21; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L21 - Mus musculus
Length = 159
Score = 96.3 bits (229), Expect = 4e-19
Identities = 40/52 (76%), Positives = 45/52 (86%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHA 259
R HG +PL+TYM++YK GDIVDI+G G VQKGMPHK YHGKTGRVYNVT HA
Sbjct: 20 RKHGIVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHA 71
>UniRef50_A6RC90 Cluster: 60s ribosomal protein l21; n=1;
Ajellomyces capsulatus NAm1|Rep: 60s ribosomal protein
l21 - Ajellomyces capsulatus NAm1
Length = 163
Score = 86.6 bits (205), Expect = 3e-16
Identities = 60/143 (41%), Positives = 78/143 (54%), Gaps = 6/143 (4%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKG-MPHKVYHGKTG-RVYNVTAHALGVIVN 277
+ HG IPLSTYM+VY+VGDIVDI+ NGAVQ+G KVYHGKTG + + A GVI+
Sbjct: 20 KKHGVIPLSTYMRVYRVGDIVDIKVNGAVQQGSYAIKVYHGKTGVCLQRDKSLAFGVIIY 79
Query: 278 KRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKE---AKAAGKTVNLKRQPAP 448
KRV R I + + ++ E+ R L + K G ++LKRQP
Sbjct: 80 KRVGNRYIGEARQRPPSSTFPTPDPEE--NSSGESRRTLSKDGRPKEEGIHIHLKRQPIG 137
Query: 449 PKAAHIVSGT-EKPVLLAPIPYE 514
P+ A VS P + PI YE
Sbjct: 138 PREARTVSTEGNMPETITPIAYE 160
>UniRef50_UPI0000D9A1A6 Cluster: PREDICTED: similar to 60S ribosomal
protein L21; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L21 - Macaca mulatta
Length = 82
Score = 70.1 bits (164), Expect = 3e-11
Identities = 43/108 (39%), Positives = 61/108 (56%)
Frame = +2
Query: 200 MPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKE 379
MPHK YH KTGRVYN+T +A+G++VNK+V+G+I+ K+ KR
Sbjct: 1 MPHKCYHSKTGRVYNITQNAVGIVVNKQVKGKILAKK------------------KR--- 39
Query: 380 NERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFVA 523
EAK G V L + P+P +A + + ++P LLAP PYE +A
Sbjct: 40 ------EAKEKGTWVQLCQAPSPGEARFVKTTGKEPELLAPSPYELMA 81
>UniRef50_UPI0000DA1EED Cluster: PREDICTED: similar to 60S ribosomal
protein L21; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L21 - Rattus norvegicus
Length = 122
Score = 68.9 bits (161), Expect = 7e-11
Identities = 42/101 (41%), Positives = 54/101 (53%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKR 283
R G +PL TYM++YK D+VDI+G G VQK P V TA
Sbjct: 20 RKDGVVPLVTYMRIYKKVDVVDIKGMGTVQKECPKCV----------TTAQP-------- 61
Query: 284 VRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 406
+ P I++ +EH+KHSK R LKRVKEN++ KEAK
Sbjct: 62 EESTMSPSMISVWIEHIKHSKSRDSLLKRVKENDQKKKEAK 102
>UniRef50_Q9AW28 Cluster: 60S ribosomal protein L21; n=1; Guillardia
theta|Rep: 60S ribosomal protein L21 - Guillardia theta
(Cryptomonas phi)
Length = 156
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/75 (41%), Positives = 51/75 (68%)
Frame = +2
Query: 152 VGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEH 331
+GD+VDI + + Q MP K YHGKTG V+++ +++LG+ + K V R + K+INI +EH
Sbjct: 35 IGDLVDIVIDPSFQSTMPFKFYHGKTGEVFSLNSNSLGIKIQKIVGNRKVCKKINIGLEH 94
Query: 332 VKHSKCRQDFLKRVK 376
++ SK F +++K
Sbjct: 95 LRISKSNFFFEEKIK 109
>UniRef50_Q9SHE5 Cluster: T19E23.15; n=1; Arabidopsis thaliana|Rep:
T19E23.15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 137
Score = 63.7 bits (148), Expect = 3e-09
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Frame = +2
Query: 113 GTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRG 292
G I LSTY+ +KVGD V+++ NGA+ HKV NK+++
Sbjct: 12 GYILLSTYLITFKVGDYVNVKVNGAI-----HKV--------------------NKQIKN 46
Query: 293 RIIPKRINIRVEHVKHSK----------CRQDFLKRVKENERLLKEAKAAGKTVNLKRQP 442
R I KRI++RVEHV+ S+ C +F R K+N+ AKA +T++ KRQP
Sbjct: 47 RNIRKRIHVRVEHVQQSRTMCLRLQQSRCDDEFSLRKKQNDVFKAAAKAKCETISTKRQP 106
Query: 443 APPKAAHIVSGTEKPVLLAPIP 508
PK +V G + PIP
Sbjct: 107 KGPKPCFMVEGMTLET-VTPIP 127
>UniRef50_A4D227 Cluster: Similar to 60S RIBOSOMAL PROTEIN L21; n=1;
Homo sapiens|Rep: Similar to 60S RIBOSOMAL PROTEIN L21 -
Homo sapiens (Human)
Length = 112
Score = 54.8 bits (126), Expect = 1e-06
Identities = 34/81 (41%), Positives = 46/81 (56%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKR 283
R G +PL+TYM+VYK GD VDI+G VQKG V K G V V A + N+
Sbjct: 8 RKRGVVPLATYMRVYKKGDTVDIKGIDIVQKGSSAGVTAAKLG-VDRVLQRA---VANR- 62
Query: 284 VRGRIIPKRINIRVEHVKHSK 346
+G+ + +R+EH +HSK
Sbjct: 63 -QGQDSCRENYVRMEHTEHSK 82
>UniRef50_Q64E17 Cluster: Ribosomal protein L21E; n=3; environmental
samples|Rep: Ribosomal protein L21E - uncultured
archaeon GZfos17A3
Length = 130
Score = 53.6 bits (123), Expect = 3e-06
Identities = 28/77 (36%), Positives = 43/77 (55%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKR 283
R G P+S ++ ++ G+ V IR + +V KGMPH+ +HG TG+V A V ++
Sbjct: 40 RARGLSPISKAIQQFEPGESVHIRIDPSVHKGMPHQRFHGMTGKVIGERGRAFIVEISDG 99
Query: 284 VRGRIIPKRINIRVEHV 334
R R K + IR EH+
Sbjct: 100 KRKRKKVKELFIRAEHL 116
>UniRef50_UPI0000DC1311 Cluster: UPI0000DC1311 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1311 UniRef100 entry -
Rattus norvegicus
Length = 88
Score = 51.2 bits (117), Expect = 2e-05
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Frame = +2
Query: 284 VRGRIIPKRINIRVEHVKHSKCR------QDFLKRVKENERLLKEAKAAGKTVNLKRQPA 445
+R + IP R + V V + R ++F K + E +EA+ G V LKRQP
Sbjct: 2 LRAQFIPGRALLCVSKVLYQAQRSPILSSREFKKDLVTKENQEEEAEEKGAWVQLKRQPV 61
Query: 446 PPKAAHIV-SGTEKPVLLAPIPYEFVA 523
PP+ AH+V + ++P PIPYEF+A
Sbjct: 62 PPREAHLVRTNGKEPEWQEPIPYEFMA 88
>UniRef50_Q9M2R5 Cluster: Putative uncharacterized protein
T10K17.30; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein T10K17.30 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 89
Score = 50.0 bits (114), Expect = 4e-05
Identities = 22/52 (42%), Positives = 36/52 (69%)
Frame = +2
Query: 281 RVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKR 436
++ +II KRI++ VEHV+ S+C +F R K+N+ L +KA G+T++ KR
Sbjct: 38 QIGDKIIRKRIHVLVEHVQQSRCAVEFKLRKKKNDELKAASKARGETISTKR 89
>UniRef50_Q4JB11 Cluster: 50S ribosomal protein L21e; n=8;
Archaea|Rep: 50S ribosomal protein L21e - Sulfolobus
acidocaldarius
Length = 103
Score = 48.8 bits (111), Expect = 8e-05
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 104 RTHGTIP-LSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNK 280
R G IP LS M Y G+ V ++ N ++ KGMPH+ YHGK G V A V VN
Sbjct: 21 REKGAIPKLSLLMHDYSQGEYVVVKINPSIHKGMPHRRYHGKVGLVVGKRGKAYEVKVNI 80
Query: 281 RVRGRII 301
+ R++
Sbjct: 81 GDKERVL 87
>UniRef50_Q9UXE0 Cluster: 50S ribosomal protein L21e; n=6;
Thermoprotei|Rep: 50S ribosomal protein L21e -
Sulfolobus solfataricus
Length = 101
Score = 46.0 bits (104), Expect = 6e-04
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 104 RTHGTIP-LSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNK 280
R G +P LS M YK GD V ++ N +V +GMPH+ Y GK G++ A V V
Sbjct: 21 RERGAVPSLSKLMVEYKEGDNVVVKINPSVHQGMPHRRYQGKVGKIIGKRGRAYLVSVTL 80
Query: 281 RVRGRII 301
+ ++I
Sbjct: 81 GDKEKVI 87
>UniRef50_Q42194 Cluster: 60S ribosomal protein L21; n=10;
Magnoliophyta|Rep: 60S ribosomal protein L21 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 72
Score = 40.7 bits (91), Expect = 0.022
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKG 199
R G IPLSTY++ +KVG + +GNGA+ KG
Sbjct: 20 RKKGYIPLSTYLRTFKVGRLRRCQGNGAIHKG 51
>UniRef50_O28743 Cluster: 50S ribosomal protein L21e; n=5;
Euryarchaeota|Rep: 50S ribosomal protein L21e -
Archaeoglobus fulgidus
Length = 97
Score = 38.7 bits (86), Expect = 0.088
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +2
Query: 119 IPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRI 298
+ + +++ + VG V I A QKGMPH + G+TG V A +V R G++
Sbjct: 25 VRIRKFLQTFDVGQRVHIDIEPASQKGMPHPRFQGRTGVVIGQRGRA--YLVQVRDGGKM 82
Query: 299 IPKRINIRVEHVK 337
K + +R EH+K
Sbjct: 83 --KTLIVRPEHLK 93
>UniRef50_Q75F53 Cluster: AAL125Wp; n=1; Eremothecium gossypii|Rep:
AAL125Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 369
Score = 38.3 bits (85), Expect = 0.12
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +2
Query: 305 KRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGTEK 484
+ +NI+ + K + D L++ KEN+ L+K A + G ++KR+ P + ++ S +K
Sbjct: 294 ENLNIKQAFARQDKYKTDVLEKQKENDILIKGAMSVGLQQDVKREGPPRQTTNLKSTVKK 353
Query: 485 PV 490
V
Sbjct: 354 KV 355
>UniRef50_O74001 Cluster: 50S ribosomal protein L21e; n=15;
Archaea|Rep: 50S ribosomal protein L21e - Pyrococcus
horikoshii
Length = 97
Score = 36.7 bits (81), Expect = 0.35
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRV 238
R G PL+ +++ ++VG V I + KGMP +HG+TG V
Sbjct: 21 RRRGLPPLTRFLQEFEVGQKVHIVIEPSYHKGMPDPRFHGRTGTV 65
>UniRef50_Q0IEM3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 300
Score = 35.9 bits (79), Expect = 0.62
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 193 LNCTIASDVYNVSNFVHFHVRGERNSSMCAEPASEQVP 80
L C I S V+N + + H+R NS+ EP + ++P
Sbjct: 170 LKCVICSKVFNFKSTLRLHIRSHHNSTTIREPETHKIP 207
>UniRef50_Q8PU21 Cluster: 50S ribosomal protein L21e; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L21e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 97
Score = 35.5 bits (78), Expect = 0.82
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRV 238
R G P+S ++ ++ G +V I + +VQKGMP+ + G TG+V
Sbjct: 20 RERGISPVSKAIQEFEDGQMVHIDIDPSVQKGMPNPKFQGFTGKV 64
>UniRef50_UPI0000E1FC07 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 99
Score = 35.1 bits (77), Expect = 1.1
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -3
Query: 220 MVYFVWHTLLNCTIASDVYNVSNFVHFHVRGERNSSMCAEPASEQV 83
MV V H+ LN + D ++++ + H RG+RN+SM ++ E V
Sbjct: 1 MVPLVGHSFLNGAHSLDFHSITFLIDSHTRGQRNNSMFSKRPGEHV 46
>UniRef50_Q5MGB3 Cluster: Transposase; n=1; Phytophthora
infestans|Rep: Transposase - Phytophthora infestans
(Potato late blight fungus)
Length = 724
Score = 35.1 bits (77), Expect = 1.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 214 IPWKDRSRVQRDCSCSRCDCQQACSRKDYTEAHQ 315
I KDRSR R+C+ R +C+ + DY E H+
Sbjct: 622 IALKDRSRAIRECTVCRFECRNPTQKTDYCEKHK 655
>UniRef50_A5BFS9 Cluster: Putative uncharacterized protein; n=15;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 2326
Score = 34.7 bits (76), Expect = 1.4
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +2
Query: 377 ENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGTEKPVLLA 499
++E+ +KEAK A + LK PA K A++V G E PV+++
Sbjct: 308 KDEKEMKEAKDAILKLELKTLPAELKYAYLVEGNEAPVVIS 348
>UniRef50_A0RUT3 Cluster: Ribosomal protein L21E; n=2;
Thermoprotei|Rep: Ribosomal protein L21E - Cenarchaeum
symbiosum
Length = 102
Score = 34.7 bits (76), Expect = 1.4
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +2
Query: 125 LSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIIP 304
+S ++ Y GD I + KG+PH+ YHGK G V A V ++ R+ ++
Sbjct: 32 VSFLLREYSAGDRALIIIDPRQHKGLPHRRYHGKVGTVKEAGRRA--VTLDVRLGEKM-- 87
Query: 305 KRINIRVEHVK 337
K + R +H+K
Sbjct: 88 KTLITRYDHIK 98
>UniRef50_A0BGP7 Cluster: Chromosome undetermined scaffold_106,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_106,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 155
Score = 34.3 bits (75), Expect = 1.9
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 374 KENERLLKEAKAAGKTVNLKRQPAPPKAA-HIVSGTEKPVLLAPIP 508
++ E ++K AKAA K ++ APPKA H+ T+KP P P
Sbjct: 54 QKQENIIKMAKAATKGNKGAKKTAPPKATKHVKKVTKKPTETTPAP 99
>UniRef50_Q1E5R4 Cluster: Putative uncharacterized protein; n=2;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 122
Score = 34.3 bits (75), Expect = 1.9
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = -3
Query: 373 DSLKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSHVVHATCLSMVYFVWHTL 194
+S++E++ LD+ N D + A + +SSH H L ++ V+H
Sbjct: 24 ESIEEIIEDKVCLDLCNIKTDHISKKLDAKNIKFTIIGMVSSHSYHLNMLLEIHNVFHVQ 83
Query: 193 LNCTIASDVY 164
L C A+D++
Sbjct: 84 LLCPAATDLF 93
>UniRef50_Q6L228 Cluster: 50S ribosomal protein L21e; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L21e -
Picrophilus torridus
Length = 97
Score = 34.3 bits (75), Expect = 1.9
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 104 RTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTG 232
+ G ++ MK ++VGD I N AV GMPH + G TG
Sbjct: 21 KNKGMPKVNEMMKTFEVGDRAAIVINSAVPDGMPHHDFQGITG 63
>UniRef50_A5FGL8 Cluster: ABC transporter related; n=1;
Flavobacterium johnsoniae UW101|Rep: ABC transporter
related - Flavobacterium johnsoniae UW101
Length = 413
Score = 33.9 bits (74), Expect = 2.5
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -3
Query: 385 LILFDSLKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTE 260
+IL DSLK+++ + ++ +LN +D L + P+ + DN E
Sbjct: 108 VILADSLKDLIQDIAIIQLLNRVVDVLEFVPNKALIKDNTFE 149
>UniRef50_A7TAZ0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 131
Score = 33.9 bits (74), Expect = 2.5
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 113 GTIPLSTYMKVYKVGDIVDIR 175
G LSTY+K YKVGDIVD++
Sbjct: 71 GVEHLSTYLKCYKVGDIVDVK 91
>UniRef50_Q9U344 Cluster: Putative uncharacterized protein; n=4;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 568
Score = 33.5 bits (73), Expect = 3.3
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -1
Query: 231 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 94
PVFP Y+ G+P PLP +P M V+ + P V+NLR
Sbjct: 226 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 271
>UniRef50_Q0YGP7 Cluster: Orn/DAP/Arg decarboxylase 2; n=3;
Desulfuromonadales|Rep: Orn/DAP/Arg decarboxylase 2 -
Geobacter sp. FRC-32
Length = 439
Score = 33.1 bits (72), Expect = 4.4
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 149 KVGDIVDIRGNGAVQKGMPHKVY--HGKTGRVYNVTAHALGVIVNKRVRGRIIPKRINIR 322
++GD V I G GA + M + Y H K G V + L +I K+VR +I ++++
Sbjct: 379 EIGDYVVIGGTGAYSESMSPENYNSHRKPGAVMKTCSGELVLIRKKQVREQIFQNELDVK 438
Query: 323 V 325
+
Sbjct: 439 L 439
>UniRef50_Q4WRE2 Cluster: SWR1-complex protein 5; n=7;
Trichocomaceae|Rep: SWR1-complex protein 5 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 359
Score = 33.1 bits (72), Expect = 4.4
Identities = 19/89 (21%), Positives = 39/89 (43%)
Frame = +2
Query: 167 DIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSK 346
D G ++K + G TG+ N++ + + R+ + I+ E +HSK
Sbjct: 269 DPNPTGTIKKSWEKQPTAGITGQTENISGPKINTVEKSRLDWAAYVDQAGIKDELKEHSK 328
Query: 347 CRQDFLKRVKENERLLKEAKAAGKTVNLK 433
++ FL R+ R++ + + + LK
Sbjct: 329 AKEGFLGRMDFLNRVVAKREEERRNARLK 357
>UniRef50_A7HA29 Cluster: Rod shape-determining protein MreC
precursor; n=2; Anaeromyxobacter|Rep: Rod
shape-determining protein MreC precursor -
Anaeromyxobacter sp. Fw109-5
Length = 291
Score = 32.3 bits (70), Expect = 7.6
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = +2
Query: 164 VDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIV----NKRVRGRIIPKRINIRVEH 331
+D V+K MP V G GRV+ V+AH V+V N + + R V
Sbjct: 139 IDRGAEDGVEKLMPVVVADGVVGRVHAVSAHTADVLVVTDRNSSIAAVVERTRARANVRG 198
Query: 332 V-KHSKCRQDFLKRVKE 379
+ K C+ D+ RV++
Sbjct: 199 LGKPDACKLDYALRVED 215
>UniRef50_P08478 Cluster: Peptidyl-glycine alpha-amidating
monooxygenase A precursor (PAM-A) (Peptidyl-glycine
alpha-amidating monooxygenase I) (Peptide C-terminal
alpha-amidating enzyme I) (AE-I) [Includes:
Peptidylglycine alpha- hydroxylating monooxygenase A (EC
1.14.17.3) (PHM-A); Peptidyl-alpha- hydroxyglycine
alpha-amidating lyase A (EC 4.3.2.5)
(Peptidylamidoglycolate lyase-A) (PAL-A)]; n=24;
Euteleostomi|Rep: Peptidyl-glycine alpha-amidating
monooxygenase A precursor (PAM-A) (Peptidyl-glycine
alpha-amidating monooxygenase I) (Peptide C-terminal
alpha-amidating enzyme I) (AE-I) [Includes:
Peptidylglycine alpha- hydroxylating monooxygenase A (EC
1.14.17.3) (PHM-A); Peptidyl-alpha- hydroxyglycine
alpha-amidating lyase A (EC 4.3.2.5)
(Peptidylamidoglycolate lyase-A) (PAL-A)] - Xenopus
laevis (African clawed frog)
Length = 935
Score = 32.3 bits (70), Expect = 7.6
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = +2
Query: 122 PLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGV--IVNKRVRGR 295
P+ +M + GDI+D MPH + G VY AHA V + R
Sbjct: 651 PVQGFMLNFSNGDILDTFIPARKNFDMPHDIAAADDGTVYVGDAHANAVWKFSPSKAEHR 710
Query: 296 IIPKRINIRVEHVKHSKCRQDFLK-RVKENERLLKEAK 406
+ K+ I VE + ++ + ++ R K NE + K+ +
Sbjct: 711 SV-KKAGIEVEEITETEIFETHIRSRPKTNESVEKQTQ 747
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,441,599
Number of Sequences: 1657284
Number of extensions: 9972326
Number of successful extensions: 34467
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 33281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34436
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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