Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_E21
(507 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117202-14|CAB57894.2| 766|Caenorhabditis elegans Hypothetical... 132 2e-31
AL117202-29|CAO82059.1| 842|Caenorhabditis elegans Hypothetical... 78 4e-15
Z79754-5|CAB02094.2| 573|Caenorhabditis elegans Hypothetical pr... 71 5e-13
AF000195-7|AAC24270.1| 676|Caenorhabditis elegans Oxysterol bin... 59 2e-09
AL117202-15|CAC42376.1| 627|Caenorhabditis elegans Hypothetical... 33 0.12
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.27
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.27
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 32 0.27
L15314-3|AAF99986.2| 393|Caenorhabditis elegans Gtp exchange fa... 31 0.48
AJ236896-1|CAB38534.1| 377|Caenorhabditis elegans GRP1 protein ... 31 0.48
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 30 0.84
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 30 0.84
Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z78059-4|CAB01487.2| 995|Caenorhabditis elegans Hypothetical pr... 30 1.1
AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein. 30 1.1
AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein. 30 1.1
U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated p... 29 2.6
U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated p... 29 2.6
M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related... 29 2.6
>AL117202-14|CAB57894.2| 766|Caenorhabditis elegans Hypothetical
protein Y47D3A.17a protein.
Length = 766
Score = 132 bits (318), Expect = 2e-31
Identities = 57/106 (53%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +1
Query: 151 EKKGWLFKWTNYLKGYQRRWFVL-SNGLLSYYRNQAEMAHTCRGTISLLGALIHTADSCT 327
EK GWL KWTNYLKGY++RWFVL SN LSYYRN +E+ HTCRG+I+L A +HT + +
Sbjct: 62 EKAGWLNKWTNYLKGYRQRWFVLDSNATLSYYRNPSEVGHTCRGSINLQEARVHTDKTTS 121
Query: 328 FVISNGGTQTFYIKAHDEVERQSWVTALELAKAKAIRAQESDDDED 465
++ +G +QTF++K +E++RQ W +LE + KAI ES++DED
Sbjct: 122 CIVISGQSQTFHVKPQNEMDRQQWTNSLEYMRHKAITRAESEEDED 167
>AL117202-29|CAO82059.1| 842|Caenorhabditis elegans Hypothetical
protein Y47D3A.17c protein.
Length = 842
Score = 77.8 bits (183), Expect = 4e-15
Identities = 32/74 (43%), Positives = 52/74 (70%)
Frame = +1
Query: 244 RNQAEMAHTCRGTISLLGALIHTADSCTFVISNGGTQTFYIKAHDEVERQSWVTALELAK 423
RN +E+ HTCRG+I+L A +HT + + ++ +G +QTF++K +E++RQ W +LE +
Sbjct: 170 RNPSEVGHTCRGSINLQEARVHTDKTTSCIVISGQSQTFHVKPQNEMDRQQWTNSLEYMR 229
Query: 424 AKAIRAQESDDDED 465
KAI ES++DED
Sbjct: 230 HKAITRAESEEDED 243
>Z79754-5|CAB02094.2| 573|Caenorhabditis elegans Hypothetical
protein F25H2.6 protein.
Length = 573
Score = 70.9 bits (166), Expect = 5e-13
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +1
Query: 160 GWLFKWTNYLKGYQRRWFVLSNGLLSYYRNQAEMAHTCRGTISLLGALI--HTADSCTFV 333
G + KWTNY+ G+Q R+F ++ G L YY ++AE +H CRG+I L A+I H D F
Sbjct: 11 GVMKKWTNYVNGWQDRYFEITEGNLVYYLSKAEKSHGCRGSIFLKSAIIAAHEFDENEFS 70
Query: 334 ISNGGTQTFYIKAHDEVERQSWVTAL 411
IS G +Y+KA + + W+ ++
Sbjct: 71 ISMGENVVWYLKAENSQSKLLWMRSV 96
>AF000195-7|AAC24270.1| 676|Caenorhabditis elegans Oxysterol
binding protein (osbp)related protein 4, isoform a
protein.
Length = 676
Score = 58.8 bits (136), Expect = 2e-09
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Frame = +1
Query: 157 KGWLFKWTNYLKGYQRRWFVLSNGLLSYYRNQAEMAH-TCRGTISLLGAL--IHTADSCT 327
+G L KWTN + G+Q RWF + N L YY ++ +M RG I L GA+ I ++
Sbjct: 2 EGPLSKWTNMVHGWQYRWFKIENDTLLYYTSREKMLKGQQRGQIRLTGAVVGIDGENNSL 61
Query: 328 FVISNGGTQTFYIKAHDEVERQSWVTALE 414
F I+ G +TF+++ D ER WV LE
Sbjct: 62 FTITVEG-KTFHMQGRDLRERNQWVRILE 89
>AL117202-15|CAC42376.1| 627|Caenorhabditis elegans Hypothetical
protein Y47D3A.17b protein.
Length = 627
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 382 VERQSWVTALELAKAKAIRAQESDDDED 465
++RQ W +LE + KAI ES++DED
Sbjct: 1 MDRQQWTNSLEYMRHKAITRAESEEDED 28
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.9 bits (69), Expect = 0.27
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 154 KKGWL-FKWTNYLKGYQRRWFVLSNGLLSYYRNQAE 258
+KGWL ++++G + WFVL + LS+Y++ E
Sbjct: 522 RKGWLSLSNVSFVRGSKDNWFVLMSDSLSWYKDDEE 557
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.27
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 154 KKGWL-FKWTNYLKGYQRRWFVLSNGLLSYYRNQAE 258
+KGWL ++++G + WFVL + LS+Y++ E
Sbjct: 522 RKGWLSLSNVSFVRGSKDNWFVLMSDSLSWYKDDEE 557
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.27
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 154 KKGWL-FKWTNYLKGYQRRWFVLSNGLLSYYRNQAE 258
+KGWL ++++G + WFVL + LS+Y++ E
Sbjct: 522 RKGWLSLSNVSFVRGSKDNWFVLMSDSLSWYKDDEE 557
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.9 bits (69), Expect = 0.27
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 154 KKGWL-FKWTNYLKGYQRRWFVLSNGLLSYYRNQAE 258
+KGWL ++++G + WFVL + LS+Y++ E
Sbjct: 522 RKGWLSLSNVSFVRGSKDNWFVLMSDSLSWYKDDEE 557
>L15314-3|AAF99986.2| 393|Caenorhabditis elegans Gtp exchange
factor for arfs protein1 protein.
Length = 393
Score = 31.1 bits (67), Expect = 0.48
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 5/36 (13%)
Frame = +1
Query: 151 EKKGWLFKWTN--YLKG---YQRRWFVLSNGLLSYY 243
E++GWLFK ++ G +++RWFVLS L Y+
Sbjct: 263 EREGWLFKQSSNPLFSGALSWKKRWFVLSENCLYYF 298
>AJ236896-1|CAB38534.1| 377|Caenorhabditis elegans GRP1 protein
protein.
Length = 377
Score = 31.1 bits (67), Expect = 0.48
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 5/36 (13%)
Frame = +1
Query: 151 EKKGWLFKWTN--YLKG---YQRRWFVLSNGLLSYY 243
E++GWLFK ++ G +++RWFVLS L Y+
Sbjct: 247 EREGWLFKQSSNPLFSGALSWKKRWFVLSENCLYYF 282
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 30.3 bits (65), Expect = 0.84
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 274 RGTISLLGALIHTA--DSCTFVISNGGTQTFYIKAHDEVERQSWVTALELA 420
+G + + LI TA +IS F I H +R+ WVT LELA
Sbjct: 671 QGVMPVQSLLIRTAARGHSIMLISGAKPVLFEISFHTSTDRKKWVTLLELA 721
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 30.3 bits (65), Expect = 0.84
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 274 RGTISLLGALIHTA--DSCTFVISNGGTQTFYIKAHDEVERQSWVTALELA 420
+G + + LI TA +IS F I H +R+ WVT LELA
Sbjct: 671 QGVMPVQSLLIRTAARGHSIMLISGAKPVLFEISFHTSTDRKKWVTLLELA 721
>Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical
protein C34B4.1b protein.
Length = 1099
Score = 29.9 bits (64), Expect = 1.1
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Frame = +1
Query: 151 EKKGWLFKWTNY-LKGYQRRWFVLSNGLLSYYR--NQAEMAHTCRGTISLLGALIHTADS 321
EK G+ + T+ +K +RR+ V NG +S+YR N + + +IS + ++
Sbjct: 354 EKSGYWTQLTDSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKISISDIRSVTKLEQQ 413
Query: 322 CTFVISNGGTQTFYIKAHDEVER--QSWVTALELA-KAKAIRAQES 450
T T + E ER WVT L A KA +R S
Sbjct: 414 GAAYAFQLITSTDKMNFMTESERTTHDWVTILSAAIKATTLREMAS 459
>Z78059-4|CAB01487.2| 995|Caenorhabditis elegans Hypothetical
protein C34B4.1a protein.
Length = 995
Score = 29.9 bits (64), Expect = 1.1
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Frame = +1
Query: 151 EKKGWLFKWTNY-LKGYQRRWFVLSNGLLSYYR--NQAEMAHTCRGTISLLGALIHTADS 321
EK G+ + T+ +K +RR+ V NG +S+YR N + + +IS + ++
Sbjct: 250 EKSGYWTQLTDSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKISISDIRSVTKLEQQ 309
Query: 322 CTFVISNGGTQTFYIKAHDEVER--QSWVTALELA-KAKAIRAQES 450
T T + E ER WVT L A KA +R S
Sbjct: 310 GAAYAFQLITSTDKMNFMTESERTTHDWVTILSAAIKATTLREMAS 355
>AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein.
Length = 1045
Score = 29.9 bits (64), Expect = 1.1
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Frame = +1
Query: 151 EKKGWLFKWTNY-LKGYQRRWFVLSNGLLSYYR--NQAEMAHTCRGTISLLGALIHTADS 321
EK G+ + T+ +K +RR+ V NG +S+YR N + + +IS + ++
Sbjct: 300 EKSGYWTQLTDSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKISISDIRSVTKLEQQ 359
Query: 322 CTFVISNGGTQTFYIKAHDEVER--QSWVTALELA-KAKAIRAQES 450
T T + E ER WVT L A KA +R S
Sbjct: 360 GAAYAFQLITSTDKMNFMTESERTTHDWVTILSAAIKATTLREMAS 405
>AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein.
Length = 1099
Score = 29.9 bits (64), Expect = 1.1
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Frame = +1
Query: 151 EKKGWLFKWTNY-LKGYQRRWFVLSNGLLSYYR--NQAEMAHTCRGTISLLGALIHTADS 321
EK G+ + T+ +K +RR+ V NG +S+YR N + + +IS + ++
Sbjct: 354 EKSGYWTQLTDSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKISISDIRSVTKLEQQ 413
Query: 322 CTFVISNGGTQTFYIKAHDEVER--QSWVTALELA-KAKAIRAQES 450
T T + E ER WVT L A KA +R S
Sbjct: 414 GAAYAFQLITSTDKMNFMTESERTTHDWVTILSAAIKATTLREMAS 459
>U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated
protein 104, isoforma protein.
Length = 1584
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 154 KKGWLFKWTNYLKGYQRRWFVLSNGLLSYYRNQAEMAHTCRGTISLLGALI-HTADSCTF 330
KKG++ +G+ RRW ++ + +R+ ++ RG I+L A I H+ D
Sbjct: 1463 KKGYMNFLEEKTQGWTRRWVIVRRPYILLFRDDRDL--VIRGIINLANARIEHSEDQQAM 1520
Query: 331 V 333
V
Sbjct: 1521 V 1521
>U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated
protein 104, isoformb protein.
Length = 1628
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 154 KKGWLFKWTNYLKGYQRRWFVLSNGLLSYYRNQAEMAHTCRGTISLLGALI-HTADSCTF 330
KKG++ +G+ RRW ++ + +R+ ++ RG I+L A I H+ D
Sbjct: 1507 KKGYMNFLEEKTQGWTRRWVIVRRPYILLFRDDRDL--VIRGIINLANARIEHSEDQQAM 1564
Query: 331 V 333
V
Sbjct: 1565 V 1565
>M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related
protein protein.
Length = 1584
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 154 KKGWLFKWTNYLKGYQRRWFVLSNGLLSYYRNQAEMAHTCRGTISLLGALI-HTADSCTF 330
KKG++ +G+ RRW ++ + +R+ ++ RG I+L A I H+ D
Sbjct: 1463 KKGYMNFLEEKTQGWTRRWVIVRRPYILLFRDDRDL--VIRGIINLANARIEHSEDQQAM 1520
Query: 331 V 333
V
Sbjct: 1521 V 1521
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,703,866
Number of Sequences: 27780
Number of extensions: 216541
Number of successful extensions: 550
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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