Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_E14
         (343 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0134 + 26805329-26805430,26807130-26807230,26807876-268080...    44   4e-05
05_05_0231 + 23488588-23488689,23488775-23488875,23489012-234891...    41   2e-04
01_01_0858 - 6699126-6699128,6699219-6699318,6700052-6700278,670...    34   0.025
10_08_1021 - 22315487-22315493,22317051-22317154,22317227-223173...    26   8.9  
06_01_0067 + 561910-561987,562698-562759,564293-564338,564701-56...    26   8.9  

>01_06_0134 +
           26805329-26805430,26807130-26807230,26807876-26808032,
           26808386-26808582,26809188-26809287,26809501-26809536
          Length = 230

 Score = 43.6 bits (98), Expect = 4e-05
 Identities = 22/58 (37%), Positives = 33/58 (56%)
 Frame = +2

Query: 80  LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMEYYEKE 253
           ++DADV KQI+ M+ FI Q                FNIEK +LV+ ++ KI + YE++
Sbjct: 1   MNDADVAKQIQQMVRFIRQEAEEKASEISVSAEEEFNIEKLQLVEAEKKKIRQEYERK 58


>05_05_0231 +
           23488588-23488689,23488775-23488875,23489012-23489168,
           23489365-23489594,23489696-23489795,23489878-23489916
          Length = 242

 Score = 41.1 bits (92), Expect = 2e-04
 Identities = 21/60 (35%), Positives = 34/60 (56%)
 Frame = +2

Query: 80  LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMEYYEKEGE 259
           ++DADV KQI+ M+ FI Q                FNIEK +LV+ ++ +I + YE++ +
Sbjct: 1   MNDADVGKQIQQMVRFILQEAEEKASEISVAAEEEFNIEKLQLVESEKRRIRQDYERKAK 60


>01_01_0858 -
           6699126-6699128,6699219-6699318,6700052-6700278,
           6701032-6701188,6701422-6701522,6702147-6702251
          Length = 230

 Score = 34.3 bits (75), Expect = 0.025
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +2

Query: 80  LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMEYYEKEGE 259
           ++D DV +Q+K M  FI Q                F IEK +LV+ ++ +I   +E+  +
Sbjct: 2   MNDGDVARQLKQMTDFIRQEAVEKAAEIEAAAAEEFQIEKLQLVEAEKKRIRLEFERNEK 61

Query: 260 AG 265
            G
Sbjct: 62  QG 63


>10_08_1021 -
           22315487-22315493,22317051-22317154,22317227-22317328,
           22317623-22317745,22318038-22318094,22318498-22318758,
           22318948-22319377,22320168-22320286,22320515-22320595
          Length = 427

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 236 EYYEKEGEAG*TSEEDPIFEHAEPSSSEGY 325
           EY E    AG  SEE+ +  H  P  S  +
Sbjct: 246 EYVENTPSAGSNSEENQVIGHVAPPKSSNF 275


>06_01_0067 +
           561910-561987,562698-562759,564293-564338,564701-564758,
           564892-565009,565130-565286,565611-565718,565884-565955,
           566058-566174,566309-566404
          Length = 303

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 212 QQQRLKIMEYYEKEGE 259
           QQQ L +++YYEK G+
Sbjct: 191 QQQTLPVIQYYEKRGK 206


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,216,962
Number of Sequences: 37544
Number of extensions: 113620
Number of successful extensions: 251
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 482105440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)