Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_E14
         (343 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF045642-4|AAK67210.1|  226|Caenorhabditis elegans Vacuolar h at...    70   4e-13
Z81016-3|CAB02664.1|  326|Caenorhabditis elegans Hypothetical pr...    27   3.5  
Z12017-7|CAH19088.1|  856|Caenorhabditis elegans Hypothetical pr...    27   4.7  
Z99279-6|CAB16498.1|  640|Caenorhabditis elegans Hypothetical pr...    26   8.1  
Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr...    26   8.1  
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr...    26   8.1  
Z82284-8|CAB05294.1|  640|Caenorhabditis elegans Hypothetical pr...    26   8.1  

>AF045642-4|AAK67210.1|  226|Caenorhabditis elegans Vacuolar h
           atpase protein 8 protein.
          Length = 226

 Score = 70.1 bits (164), Expect = 4e-13
 Identities = 34/58 (58%), Positives = 40/58 (68%)
 Frame = +2

Query: 80  LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMEYYEKE 253
           +SD DVQKQ++HMMAFIEQ                FNIEKGRLVQQQR KIME++EK+
Sbjct: 3   ISDNDVQKQLRHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRQKIMEFFEKK 60


>Z81016-3|CAB02664.1|  326|Caenorhabditis elegans Hypothetical
           protein F21G4.5 protein.
          Length = 326

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = +2

Query: 191 IEKGRLVQQQRLKIMEYYEKEGEAG*TSEEDPIFE 295
           I+  R  ++Q+ K++EYYEK+ +    +EED +F+
Sbjct: 200 IKTERETKKQK-KLVEYYEKKCQRAQVAEEDLLFK 233


>Z12017-7|CAH19088.1|  856|Caenorhabditis elegans Hypothetical
           protein R08D7.6c protein.
          Length = 856

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 15/54 (27%), Positives = 22/54 (40%)
 Frame = +1

Query: 64  SSSHGAQRCRCSETDQAHDGLHXXXXXXXXXXXXCEGRGGVQHRKGPSCPAATS 225
           SS+H + +  C +  Q  DGLH            C G  G    K  + PA ++
Sbjct: 11  SSAHPSPQTNC-QNSQRGDGLHHHHHEAASGSTCCGGMTGANAAKSSNEPAGSA 63


>Z99279-6|CAB16498.1|  640|Caenorhabditis elegans Hypothetical
           protein Y57G11A.2 protein.
          Length = 640

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 260 AG*TSEEDPIFEHAEPSSS 316
           +G  SE DP+FE  +PSS+
Sbjct: 337 SGENSESDPVFEVVDPSSA 355


>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical
           protein ZK1151.1i protein.
          Length = 1497

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 169 EGRGGVQHRKGPSCPAATSQ 228
           EG GG+      SCP+A+SQ
Sbjct: 65  EGGGGLSSTSSSSCPSASSQ 84


>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical
           protein ZK1151.1i protein.
          Length = 1497

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 169 EGRGGVQHRKGPSCPAATSQ 228
           EG GG+      SCP+A+SQ
Sbjct: 65  EGGGGLSSTSSSSCPSASSQ 84


>Z82284-8|CAB05294.1|  640|Caenorhabditis elegans Hypothetical
           protein Y57G11A.2 protein.
          Length = 640

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 260 AG*TSEEDPIFEHAEPSSS 316
           +G  SE DP+FE  +PSS+
Sbjct: 337 SGENSESDPVFEVVDPSSA 355


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,912,122
Number of Sequences: 27780
Number of extensions: 88748
Number of successful extensions: 225
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)