Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_D23
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.39 
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    26   0.90 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   1.6  
AY748841-1|AAV28189.1|  158|Anopheles gambiae cytochrome P450 pr...    25   2.1  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   4.8  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   8.4  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 4/81 (4%)
 Frame = -1

Query: 645 PPTARFAPQMRTVRVHAPGQAVLTAVHAQILTQGID---REDAANFKLPC-FGDREPPIG 478
           PPT RFAP+ R      P   + T     +L Q      + D      P     R PPI 
Sbjct: 109 PPTTRFAPEPRAEVKFVPSVPLKTPPVRPLLPQQQQHPHQRDTGPALFPAPISHRPPPIA 168

Query: 477 VGRGQFAAHPSGGLGATDPPP 415
             +  FA  P+       P P
Sbjct: 169 HQQAPFAMDPARPNPGMPPGP 189


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 480 GVGRGQFAAHPSGGLGATDPPPLVRTLRYMIEADFCQ 370
           G+G G F+  P   LG+T P  +  T+ Y    +FCQ
Sbjct: 567 GIGYGFFSGQPLTILGSTGPVLVFETIVY----EFCQ 599


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = +2

Query: 356 SIKRN*QKSASIIYLKVRTRGGGSVAPKPPDGWAANCPLPTPMGGSRSPKQGSLKLAASS 535
           S+K    KS +++ +  +T   G  +      W+       PMGG +    GS   A+SS
Sbjct: 711 SVKSAIVKSINVVSIAAKTMREGRCSSVSGGDWS-------PMGGDQQNSNGSSSTASSS 763

Query: 536 LS 541
           +S
Sbjct: 764 VS 765


>AY748841-1|AAV28189.1|  158|Anopheles gambiae cytochrome P450
           protein.
          Length = 158

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -2

Query: 206 FVVSAFGPVSGHAVFEETASVMADGKC*RSAILFV*I*DNNFVQF-ELIIVFFLRII 39
           F+V AFG +  H   ++     ADG   R     + + D   +Q+ E +I+  LR+I
Sbjct: 40  FLVKAFGYIVQHPEVQQRIQAEADGVLERHGRQVIELTDRAEMQYTEAVIMEALRLI 96


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +2

Query: 440 PPDGWAANCPLPTPMGGSRSP 502
           PP     N PLP PM G R P
Sbjct: 99  PPLLMGPNGPLPPPMMGMRPP 119


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +1

Query: 109 KMADRQHF-PSAITEAVSSNTACPDTGPKA 195
           ++ +R  F PSA+T   SS+  C    PK+
Sbjct: 339 RIHERARFDPSALTSHRSSSANCSSAAPKS 368


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,061
Number of Sequences: 2352
Number of extensions: 16057
Number of successful extensions: 30
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)