Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_D22
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 204 6e-53
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 117 6e-27
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 117 6e-27
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 96 2e-20
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 96 2e-20
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 92 4e-19
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 85 5e-17
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 80 2e-15
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 80 2e-15
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 78 6e-15
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 69 2e-12
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 68 7e-12
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 68 7e-12
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 64 1e-10
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 62 4e-10
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 55 5e-08
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 46 3e-05
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 41 7e-04
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 38 0.006
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 33 0.23
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical p... 28 5.0
AL032655-1|CAA21726.1| 995|Caenorhabditis elegans Hypothetical ... 28 6.7
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 27 8.8
AL132860-7|CAB60522.1| 300|Caenorhabditis elegans Hypothetical ... 27 8.8
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 204 bits (497), Expect = 6e-53
Identities = 93/129 (72%), Positives = 105/129 (81%)
Frame = +1
Query: 40 VPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPN 219
VPGISA P E+NARYFHV++ GP+DS +YPM+APKVRF+TKIYHPN
Sbjct: 21 VPGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPN 80
Query: 220 IDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRN 399
ID+LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP+DPLA DVAE WK NE+EAI+
Sbjct: 81 IDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPEDPLATDVAEQWKTNEAEAIKT 140
Query: 400 AKEWTRRYA 426
AK+WT YA
Sbjct: 141 AKQWTMNYA 149
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 117 bits (282), Expect = 6e-27
Identities = 56/126 (44%), Positives = 75/126 (59%)
Frame = +1
Query: 52 SAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNIDRL 231
SA P + ++ + GP +S DYP PKV F T+IYHPNI+
Sbjct: 22 SAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSN 81
Query: 232 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKEW 411
G ICLDIL+ +WSPAL I VLLSI +LL PNPDDPL ++A ++K + + A+EW
Sbjct: 82 GSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREW 141
Query: 412 TRRYAM 429
T++YAM
Sbjct: 142 TQKYAM 147
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 117 bits (282), Expect = 6e-27
Identities = 56/126 (44%), Positives = 75/126 (59%)
Frame = +1
Query: 52 SAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNIDRL 231
SA P + ++ + GP +S DYP PKV F T+IYHPNI+
Sbjct: 22 SAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSN 81
Query: 232 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKEW 411
G ICLDIL+ +WSPAL I VLLSI +LL PNPDDPL ++A ++K + + A+EW
Sbjct: 82 GSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREW 141
Query: 412 TRRYAM 429
T++YAM
Sbjct: 142 TQKYAM 147
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 96.3 bits (229), Expect = 2e-20
Identities = 42/114 (36%), Positives = 66/114 (57%)
Frame = +1
Query: 46 GISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNID 225
G+S P+E N + I+ GP+++ +YP P V+FI+K++HPN+
Sbjct: 23 GVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVY 82
Query: 226 RLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESE 387
G ICLDIL+++WSP + +L SIQ+LL PNP+ P + A+L++ N E
Sbjct: 83 ADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRRE 136
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 96.3 bits (229), Expect = 2e-20
Identities = 42/114 (36%), Positives = 66/114 (57%)
Frame = +1
Query: 46 GISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNID 225
G+S P+E N + I+ GP+++ +YP P V+FI+K++HPN+
Sbjct: 23 GVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVY 82
Query: 226 RLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESE 387
G ICLDIL+++WSP + +L SIQ+LL PNP+ P + A+L++ N E
Sbjct: 83 ADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRRE 136
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 91.9 bits (218), Expect = 4e-19
Identities = 46/111 (41%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Frame = +1
Query: 97 VTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNID-RLGRICLDILKDKWSP 273
+ GP D+ YP S P V+F TKI+HPN+ + G ICLDILKD+W+
Sbjct: 43 IRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAA 102
Query: 274 ALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKEWTRRYA 426
+L +RTVLLSIQAL+ P P DP VA+ + + A+ WT ++A
Sbjct: 103 SLTLRTVLLSIQALMCTPEPKDPQDAVVAKQYMEKPAVFKATAEYWTTKFA 153
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 84.6 bits (200), Expect = 5e-17
Identities = 36/89 (40%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Frame = +1
Query: 163 DYPMSAPKVRFITKIYHPNIDRLGRICLDIL-KDKWSPALQIRTVLLSIQALLSAPNPDD 339
DYP PKV F TKIYHPN+D G+ CL I+ + W PA + V++++ +L++ P P
Sbjct: 60 DYPFKPPKVAFETKIYHPNVDEEGKFCLPIVTAENWKPATKTEQVMMALLSLINEPEPSH 119
Query: 340 PLANDVAELWKVNESEAIRNAKEWTRRYA 426
P+ DVAE ++ + + ++ A+E TR++A
Sbjct: 120 PIRADVAEEFQKDHKKFMKTAEEHTRKHA 148
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 79.8 bits (188), Expect = 2e-15
Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 14/151 (9%)
Frame = +1
Query: 10 KRHSD*CRSXVPGISAVPSETNARY-FHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPK 186
K+ +D R V G SA + N Y + V+V GP D+ DYP PK
Sbjct: 10 KQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPK 69
Query: 187 VRFITKIYHPNIDRLGRICLDILKD-------------KWSPALQIRTVLLSIQALLSAP 327
++FI++I+HPNID+ G +C+ IL D +W P + T+LLS+ ++L+ P
Sbjct: 70 MKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDP 129
Query: 328 NPDDPLANDVAELWKVNESEAIRNAKEWTRR 420
N + P D A++ + N +E + + RR
Sbjct: 130 NFESPANVDAAKMQRENYAEFKKKVAQCVRR 160
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 79.8 bits (188), Expect = 2e-15
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +1
Query: 184 KVRFITKIYHPNID-RLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVA 360
+ +F+T+I+HPNI + G ICLDILKDKW+ +L +RTVLLS+QA+L +P P DP VA
Sbjct: 101 QAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVA 160
Query: 361 ELWKVNESEAIRNAKEWTRRYA 426
+ + N A WT +A
Sbjct: 161 KQFINNYPMFTATAVYWTSYFA 182
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 77.8 bits (183), Expect = 6e-15
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 14/139 (10%)
Frame = +1
Query: 46 GISAVP-SETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNI 222
GI A P E N + ++TGPE++ DYP+S PK+RF I+HPNI
Sbjct: 23 GIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDYPLSPPKMRFTCGIFHPNI 82
Query: 223 DRLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAE 363
GR+C+ IL ++WSP I +LLS+ ++L+ PN + P A+
Sbjct: 83 YADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSVVSMLAEPNDESPANVSAAK 142
Query: 364 LWKVNESEAIRNAKEWTRR 420
+W+ + ++ + A R+
Sbjct: 143 MWREDRAQFEKIADSLVRK 161
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 69.3 bits (162), Expect = 2e-12
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Frame = +1
Query: 85 FHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNIDRL-GRICLDILKD 261
F V GP+D+ YP +P + F+ KI+HPNID G +CLD++
Sbjct: 35 FIVRFHGPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQ 94
Query: 262 KWSPALQIRTVL-LSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKEWTRRYAMDN 435
W+ + + + LL+ PN DPL + A L+ E R +E+ R+A ++
Sbjct: 95 AWTALYDLTNIFDTFLPQLLTYPNAADPLNGEAARLYIHKPEEYRRTCREYVMRFASEH 153
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 67.7 bits (158), Expect = 7e-12
Identities = 29/92 (31%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Frame = +1
Query: 163 DYPMSAPKVRFITKIYHPNIDRLGRICLDILKDK--WSPALQIRTVLLSIQALLSAPNPD 336
D+P + PK +F ++HPN+ G +CL +L + W P++ I+ +L+ IQ LL+ PN +
Sbjct: 67 DFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIE 126
Query: 337 DPLANDVAELWKVNESEAIRNAKEWTRRYAMD 432
DP + +++ N +E + K+ +YA +
Sbjct: 127 DPAQAEAYQIYCQNRAEYEKRVKKEAVKYAAE 158
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 67.7 bits (158), Expect = 7e-12
Identities = 29/92 (31%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Frame = +1
Query: 163 DYPMSAPKVRFITKIYHPNIDRLGRICLDILKDK--WSPALQIRTVLLSIQALLSAPNPD 336
D+P + PK +F ++HPN+ G +CL +L + W P++ I+ +L+ IQ LL+ PN +
Sbjct: 67 DFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIE 126
Query: 337 DPLANDVAELWKVNESEAIRNAKEWTRRYAMD 432
DP + +++ N +E + K+ +YA +
Sbjct: 127 DPAQAEAYQIYCQNRAEYEKRVKKEAVKYAAE 158
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 63.7 bits (148), Expect = 1e-10
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Frame = +1
Query: 94 IVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNIDRL-GRICL-DILKDKW 267
I+ G E++ YP AP V+FITKI+HP++ G ICL D+ W
Sbjct: 384 IIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGVW 443
Query: 268 SPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKEWTRRYA 426
++ I VL+ IQ+ +S N +P+ ++ E N + A+ WT+R+A
Sbjct: 444 PVSMTIYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEKTAEFWTKRFA 496
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 61.7 bits (143), Expect = 4e-10
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 13/124 (10%)
Frame = +1
Query: 40 VPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPN 219
V G + +E N + V + GP + +YP S P ++F TK++HPN
Sbjct: 27 VEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPN 86
Query: 220 IDRLGRICLDILK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLANDVA 360
+ G +C+ IL ++W+P +RT+LLS+ +LL+ PN P D +
Sbjct: 87 VYENGDLCISILHSPIDDPQSGELACERWNPTQSVRTILLSVISLLNEPNTSSPANVDAS 146
Query: 361 ELWK 372
+++
Sbjct: 147 VMYR 150
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 54.8 bits (126), Expect = 5e-08
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Frame = +1
Query: 166 YPMSAPKVRFITKIY--HPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSA 324
YP ++P+V F+ + HP+I G ICL IL D W+PAL +++V LSI ++LS+
Sbjct: 65 YPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPALSVQSVCLSILSMLSS 119
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +1
Query: 163 DYPMSAPKVRFITKIYHPNIDRLG-RICLD-ILKDKWSPALQIRTVLLSIQALLSAPNPD 336
+YP P ++F +YHPN+D + +C +L++ W P + VLL++ LL+ P+
Sbjct: 71 EYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTMEDVLLNLIVLLNEPDLS 130
Query: 337 DPLANDVAELWKVNESEAIRNAKEWTRRY 423
P+ D A + N+ E ++ + E +++
Sbjct: 131 RPVNIDAAHDYIHNKVEFVKKSTELAKKW 159
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 49.2 bits (112), Expect = 3e-06
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 7/129 (5%)
Frame = +1
Query: 58 VPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNIDRLGR 237
VPS + + VT P++ +Y P V+ +TK++HPNI+ G
Sbjct: 52 VPSTSCLHELELTVT-PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGS 110
Query: 238 ICLDILKDK------WSPALQIRTVLLSIQALLS-APNPDDPLANDVAELWKVNESEAIR 396
ICL IL+ W P + V+ + +L + + +D L A++W N
Sbjct: 111 ICLSILRQNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNH 170
Query: 397 NAKEWTRRY 423
+E+ RY
Sbjct: 171 RVREYISRY 179
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Frame = +1
Query: 91 VIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITK-----IYHPNIDRLGRICLDIL 255
V+++GP+D+ YP S PK F+T ++PN+ G+ICL IL
Sbjct: 447 VLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSIL 506
Query: 256 -------KDKWSPALQIRTVLLSIQALL 318
++KW+P + VL+SIQ ++
Sbjct: 507 GTWEGRPEEKWNPYCSLMQVLVSIQEVI 534
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 41.1 bits (92), Expect = 7e-04
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +1
Query: 166 YPMSAPKVRFITKIYHPNIDRLGRICLDIL-KDKWSPALQIRTVLLSIQALLSAPNPDDP 342
+P+ P F T ++HPN+D G I L +L ++ WS ++ +L I LL+ P+
Sbjct: 97 WPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQEHWSSETSLKKLLREISNLLATPDLTQ- 155
Query: 343 LANDVAELWKVNESEAIRNAKEWTRRYA 426
AN E W E++ N + R YA
Sbjct: 156 AAN--IEAWMEYENQR-ENYEAKARAYA 180
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 3/104 (2%)
Frame = +1
Query: 31 RSXVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIY 210
+ VP + A P ETN + I+ G + D+P P + +T
Sbjct: 22 KEPVPFMKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKPPAILMLTP-- 79
Query: 211 HPNIDRLGRICLDILK---DKWSPALQIRTVLLSIQALLSAPNP 333
+ R+CL I D W+PA + T++ + + ++ P
Sbjct: 80 NGRFQTNTRLCLSISDYHPDTWNPAWTVSTIITGLMSFMNDNQP 123
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 32.7 bits (71), Expect = 0.23
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = +1
Query: 55 AVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNIDRLG 234
A P E N +H + G + DYPM P + +T +++
Sbjct: 31 AQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMKPPNLILLTPNGRFELNK-- 88
Query: 235 RICLDIL---KDKWSPALQIRTVLLSIQALL 318
++CL I + W P+ IRT LL++ L
Sbjct: 89 KVCLSISGYHPETWLPSWSIRTALLALIGFL 119
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 67 ETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSA-PKVRFITKIYHPNIDRLG 234
ET FHVI+ GP S S P+V F T I+HPN+ + G
Sbjct: 58 ETKQLLFHVIIDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLGKYG 114
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +1
Query: 163 DYPMSAPKVRFITKIYHPNIDRLGRIC----LDILKDKWSPALQIRTVLLSIQ 309
+YP P VRF TK++ +++ + L L++ WS + I+TVL I+
Sbjct: 67 NYPREPPTVRFTTKVHMVGVNQSNGVIDKRNLTTLRN-WSNSYMIKTVLEDIR 118
>Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical
protein C08H9.4b protein.
Length = 465
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 334 DDPLANDVAELWKVNESEAIRNAKEW 411
D PL +D +WKVNES + A W
Sbjct: 346 DLPLRDDSDNIWKVNESGRLAVALRW 371
>AL032655-1|CAA21726.1| 995|Caenorhabditis elegans Hypothetical
protein Y6B3B.3 protein.
Length = 995
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 310 ALLSAPNPDDPLAN-DVAELWKVNESEAIRNAKEWT 414
AL+ NP N DVAE+ + N S I N EWT
Sbjct: 286 ALVELKNPTVNAENEDVAEVKERNRSIVIHNVPEWT 321
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 461 CRPCAPHDQRDITTYECKLC 520
C PCAP T EC+LC
Sbjct: 933 CVPCAPGTYHSAATGECELC 952
>AL132860-7|CAB60522.1| 300|Caenorhabditis elegans Hypothetical
protein Y56A3A.10 protein.
Length = 300
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -2
Query: 629 VRQWITAKGPAPRPSSTNNKNLIHNSLSQVTLFRMCNITCTHKS*Y-LVGRVARTVGTGA 453
+R WI P +N + + + LF+ N THK+ Y ++R GT A
Sbjct: 223 MRSWIKGSNPRLTKFCIHNSPRVRDPYFETLLFQNMNYIETHKNKYWRTFEISRPDGTKA 282
Query: 452 LV 447
++
Sbjct: 283 II 284
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,665,957
Number of Sequences: 27780
Number of extensions: 288002
Number of successful extensions: 757
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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