Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_D12
(396 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L40410-1|AAC41737.1| 152|Homo sapiens thyroid receptor interact... 53 3e-07
BC017931-1|AAH17931.1| 155|Homo sapiens zinc finger, HIT type 3... 53 3e-07
AF400652-1|AAM82423.1| 155|Homo sapiens thyroid hormone recepto... 53 3e-07
AB209193-1|BAD92430.1| 129|Homo sapiens thyroid hormone recepto... 53 3e-07
U33821-1|AAA75595.2| 747|Homo sapiens tax1-binding protein TXBP... 31 1.0
CR457056-1|CAG33337.1| 747|Homo sapiens TAX1BP1 protein. 31 1.0
AF268075-1|AAG03025.1| 747|Homo sapiens TRAF6-binding protein T... 31 1.0
AF090891-1|AAF24016.1| 747|Homo sapiens PRO0105 protein. 31 1.0
AC004549-1|AAC13359.2| 596|Homo sapiens unknown protein. 31 1.0
>L40410-1|AAC41737.1| 152|Homo sapiens thyroid receptor interactor
protein.
Length = 152
Score = 53.2 bits (122), Expect = 3e-07
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +3
Query: 153 STEVKKCLENPHVREILELLDSSANPDELVQEYMQEPIFTEFVDACLKVVQLS 311
S ++ L NPH+R+++ LD + +L++ YMQEP+F EF D CL +V+ S
Sbjct: 95 SATLRSLLLNPHLRQLMVNLDQGEDKAKLMRAYMQEPLFVEFADCCLGIVEPS 147
>BC017931-1|AAH17931.1| 155|Homo sapiens zinc finger, HIT type 3
protein.
Length = 155
Score = 53.2 bits (122), Expect = 3e-07
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +3
Query: 153 STEVKKCLENPHVREILELLDSSANPDELVQEYMQEPIFTEFVDACLKVVQLS 311
S ++ L NPH+R+++ LD + +L++ YMQEP+F EF D CL +V+ S
Sbjct: 98 SATLRSLLLNPHLRQLMVNLDQGEDKAKLMRAYMQEPLFVEFADCCLGIVEPS 150
>AF400652-1|AAM82423.1| 155|Homo sapiens thyroid hormone receptor
interacting protein 3 protein.
Length = 155
Score = 53.2 bits (122), Expect = 3e-07
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +3
Query: 153 STEVKKCLENPHVREILELLDSSANPDELVQEYMQEPIFTEFVDACLKVVQLS 311
S ++ L NPH+R+++ LD + +L++ YMQEP+F EF D CL +V+ S
Sbjct: 98 SATLRSLLLNPHLRQLMVNLDQGEDKAKLMRAYMQEPLFVEFADCCLGIVEPS 150
>AB209193-1|BAD92430.1| 129|Homo sapiens thyroid hormone receptor
interactor 3 variant protein.
Length = 129
Score = 53.2 bits (122), Expect = 3e-07
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +3
Query: 153 STEVKKCLENPHVREILELLDSSANPDELVQEYMQEPIFTEFVDACLKVVQLS 311
S ++ L NPH+R+++ LD + +L++ YMQEP+F EF D CL +V+ S
Sbjct: 72 SATLRSLLLNPHLRQLMVNLDQGEDKAKLMRAYMQEPLFVEFADCCLGIVEPS 124
>U33821-1|AAA75595.2| 747|Homo sapiens tax1-binding protein TXBP151
protein.
Length = 747
Score = 31.5 bits (68), Expect = 1.0
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +3
Query: 90 KNRLKIYYENNYKLA*LSDKNSTEVKKCLENPHVREILELLDSSANPDELVQEYMQEP 263
K ++KI +LA + D N E+K+ LENP R++ + D + PDE+ + ++ P
Sbjct: 567 KEQVKIAENVKLELAEVQD-NYKELKRSLENPAERKMEDGADGAFYPDEIQRPPVRVP 623
>CR457056-1|CAG33337.1| 747|Homo sapiens TAX1BP1 protein.
Length = 747
Score = 31.5 bits (68), Expect = 1.0
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +3
Query: 90 KNRLKIYYENNYKLA*LSDKNSTEVKKCLENPHVREILELLDSSANPDELVQEYMQEP 263
K ++KI +LA + D N E+K+ LENP R++ + D + PDE+ + ++ P
Sbjct: 567 KEQVKIAENVKLELAEVQD-NYKELKRSLENPAERKMEDGADGAFYPDEIQRPPVRVP 623
>AF268075-1|AAG03025.1| 747|Homo sapiens TRAF6-binding protein T6BP
protein.
Length = 747
Score = 31.5 bits (68), Expect = 1.0
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +3
Query: 90 KNRLKIYYENNYKLA*LSDKNSTEVKKCLENPHVREILELLDSSANPDELVQEYMQEP 263
K ++KI +LA + D N E+K+ LENP R++ + D + PDE+ + ++ P
Sbjct: 567 KEQVKIAENVKLELAEVQD-NYKELKRSLENPAERKMEDGADGAFYPDEIQRPPVRVP 623
>AF090891-1|AAF24016.1| 747|Homo sapiens PRO0105 protein.
Length = 747
Score = 31.5 bits (68), Expect = 1.0
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +3
Query: 90 KNRLKIYYENNYKLA*LSDKNSTEVKKCLENPHVREILELLDSSANPDELVQEYMQEP 263
K ++KI +LA + D N E+K+ LENP R++ + D + PDE+ + ++ P
Sbjct: 567 KEQVKIAENVKLELAEVQD-NYKELKRSLENPAERKMEDGADGAFYPDEIQRPPVRVP 623
>AC004549-1|AAC13359.2| 596|Homo sapiens unknown protein.
Length = 596
Score = 31.5 bits (68), Expect = 1.0
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +3
Query: 90 KNRLKIYYENNYKLA*LSDKNSTEVKKCLENPHVREILELLDSSANPDELVQEYMQEP 263
K ++KI +LA + D N E+K+ LENP R++ + D + PDE+ + ++ P
Sbjct: 416 KEQVKIAENVKLELAEVQD-NYKELKRSLENPAERKMEDGADGAFYPDEIQRPPVRVP 472
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,650,232
Number of Sequences: 237096
Number of extensions: 803818
Number of successful extensions: 1511
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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