Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_D12
         (396 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016451-8|AAB66004.2|  354|Caenorhabditis elegans Serpentine re...    28   2.1  
Z73905-3|CAA98111.3|  357|Caenorhabditis elegans Hypothetical pr...    27   4.9  
U58750-6|AAB00646.1| 2049|Caenorhabditis elegans Rod (drosophila...    27   4.9  
Z83238-11|CAE11318.1|  326|Caenorhabditis elegans Hypothetical p...    27   6.4  
U80028-10|AAN73868.2|  376|Caenorhabditis elegans Serpentine rec...    27   6.4  
U28731-2|AAA68297.1|  658|Caenorhabditis elegans Hypothetical pr...    27   6.4  
CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical ...    27   6.4  
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr...    26   8.5  
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr...    26   8.5  
AL021346-1|CAA16154.1|  823|Caenorhabditis elegans Hypothetical ...    26   8.5  
AC006832-2|AAO38580.1|  366|Caenorhabditis elegans Hypothetical ...    26   8.5  
AC006832-1|AAO38581.1|  376|Caenorhabditis elegans Hypothetical ...    26   8.5  

>AF016451-8|AAB66004.2|  354|Caenorhabditis elegans Serpentine
           receptor, class t protein65 protein.
          Length = 354

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
 Frame = -1

Query: 159 LLNFCHLIKRVYSYFHNIFLAY-FL--SVTYLFRLFG 58
           LLN+C + + V  +F  +FL + F+  ++ Y+ R+FG
Sbjct: 100 LLNYCDVSQAVCHFFTGLFLIFPFITENIQYIVRIFG 136


>Z73905-3|CAA98111.3|  357|Caenorhabditis elegans Hypothetical
           protein C32C4.3 protein.
          Length = 357

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = -1

Query: 180 FLDIS*LLLNFCHLIKRVYSYFHNIFLAYFLSVTYLFRLFGYILCA*FGFIFCYCTVLLF 1
           F  +S   LN    I+  Y YF ++  +Y      L  +F  ++    G I C C + +F
Sbjct: 204 FASLSSAFLNISDGIEPKYMYFSSVPTSYTPIWPSLVAVFVVLIFFVMGLILCCCGLFMF 263


>U58750-6|AAB00646.1| 2049|Caenorhabditis elegans Rod (drosophila
            roughdeal) homologprotein 1 protein.
          Length = 2049

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -1

Query: 297  LSNMHQQIL*IWV--LAYILELTHQDLQKNQAALIFLSHGDFLD 172
            L+ +H+Q++  WV     I+ + H D+ ++     FL H D  D
Sbjct: 1846 LTALHEQLVFSWVEDTQTIISINHVDMNESIGGTSFLDHKDETD 1889


>Z83238-11|CAE11318.1|  326|Caenorhabditis elegans Hypothetical
           protein T08G3.12 protein.
          Length = 326

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -1

Query: 240 LTHQDLQKNQAALIFLS-HGDFLDIS*LLLN 151
           L H D+ +N  A+IFLS HG    I+ LL++
Sbjct: 267 LDHLDMIENNTAIIFLSLHGSMSTITTLLVH 297


>U80028-10|AAN73868.2|  376|Caenorhabditis elegans Serpentine
           receptor, class w protein139 protein.
          Length = 376

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = -1

Query: 258 LAYILELTHQDLQKNQAALIFLSHGDFLDIS*LLLNFCHLIKRVYSYFHNIFLA 97
           + +++ LT + L+ +   LI  +   F DI  LL+    +I+ +  YF+N + A
Sbjct: 55  IIHLIILTRKSLRSSSVNLIMAAVA-FFDICTLLIEIEQIIQDLIIYFNNCYQA 107


>U28731-2|AAA68297.1|  658|Caenorhabditis elegans Hypothetical
           protein F12A10.4 protein.
          Length = 658

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +3

Query: 159 EVKKCLENPHVREILELLDSSANPDE 236
           + K+C++  +  E+LEL+DSS NP E
Sbjct: 95  QTKECVK--YSAELLELMDSSVNPCE 118


>CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical
           protein C42C1.4a protein.
          Length = 1259

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 293 QTCINKFCEYGFLHIFLN*LIRICRRI 213
           Q C+N  CE   +H FLN ++++  R+
Sbjct: 750 QLCVNMKCELSLIH-FLNLVVQLSERV 775


>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
           protein T23F2.2b protein.
          Length = 1538

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 284 CMFESCSTLNNIMKLNIVSMR 346
           C FE+C+   N+MK  I S+R
Sbjct: 473 CNFEACAETKNLMKNEIESLR 493


>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
           protein T23F2.2a protein.
          Length = 1534

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 284 CMFESCSTLNNIMKLNIVSMR 346
           C FE+C+   N+MK  I S+R
Sbjct: 473 CNFEACAETKNLMKNEIESLR 493


>AL021346-1|CAA16154.1|  823|Caenorhabditis elegans Hypothetical
           protein H37A05.1 protein.
          Length = 823

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = +3

Query: 141 SDKNSTEVKKCLENPHVREILELLDSSANPDELVQEYMQEPIFTEFVDA 287
           +D+   E +K  +      + ELL+SS+NP E +++Y+ +P     +D+
Sbjct: 378 ADEEQKEKEKLEQEEQGISLDELLNSSSNPVE-IEKYLGKPPSVTSIDS 425


>AC006832-2|AAO38580.1|  366|Caenorhabditis elegans Hypothetical
           protein ZK355.2a protein.
          Length = 366

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -1

Query: 261 VLAYILELTHQDLQKNQAALIFLSHGDFLDIS*LLLNFCHLIKRV 127
           V+ Y+L      L       I+ S G F+ +   L++FC +++R+
Sbjct: 167 VMGYVLASIEPRLDCRAPYWIWFSTGQFIIVQMTLVSFCMILRRM 211


>AC006832-1|AAO38581.1|  376|Caenorhabditis elegans Hypothetical
           protein ZK355.2b protein.
          Length = 376

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -1

Query: 261 VLAYILELTHQDLQKNQAALIFLSHGDFLDIS*LLLNFCHLIKRV 127
           V+ Y+L      L       I+ S G F+ +   L++FC +++R+
Sbjct: 177 VMGYVLASIEPRLDCRAPYWIWFSTGQFIIVQMTLVSFCMILRRM 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,101,268
Number of Sequences: 27780
Number of extensions: 150557
Number of successful extensions: 532
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)