Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_D09
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.71 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.71 
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   5.0  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   6.6  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   8.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +1

Query: 103 RSRNRSGYHVLLRWCLPAREGGDHRQRPGXTGPLRLMLRSQ 225
           + R R G     +WC P R       R    GP RL  RS+
Sbjct: 573 KCRARYGLDQQNQWCKPCRPREQLTWRRNFHGPHRLAARSR 613


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +1

Query: 103 RSRNRSGYHVLLRWCLPAREGGDHRQRPGXTGPLRLMLRSQ 225
           + R R G     +WC P R       R    GP RL  RS+
Sbjct: 465 KCRARYGLDQQNQWCKPCRPREQLTWRRNFHGPHRLAARSR 505


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 501 NCAECSYHGSAYFNDSQ 551
           N   C Y+  AYF D Q
Sbjct: 19  NKVVCYYNSKAYFRDGQ 35


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +3

Query: 507 AECSYHGSAYFNDSQRQATXRCR 575
           +EC  +G    N   R A   CR
Sbjct: 40  SECKNNGECVINKKNRTACKACR 62


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 148 LPAREGGDHRQRP 186
           +P R+  DHR RP
Sbjct: 246 IPIRQCDDHRDRP 258


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 147 TPTQEYVVPRSIPT 106
           TPT + VV R+IP+
Sbjct: 15  TPTDQRVVTRTIPS 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,217
Number of Sequences: 336
Number of extensions: 2842
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)