Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_D07
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   2.8  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   3.7  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   3.7  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    24   4.8  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   8.4  

>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 43  PNSLKKHRRRRKDPVAAKPRRR 108
           P + ++HRRRR  P     RRR
Sbjct: 327 PGAAERHRRRRPPPRRRHDRRR 348


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 67  RRRKDPVAAKPRRRSGPKEKFVTS*TTRCCLINPHMRNCTRK 192
           RRR+  +A   RRR  P+ +     TTR     P  R  T++
Sbjct: 492 RRRRRAIARARRRRCRPRARRNPPATTRPVRHRPTRRKSTKR 533


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 17   AQEGREGFGQTASKNTEEEGRIRWRQSQEEEVVQ 118
            A EGRE       +    + RIR    Q++EVV+
Sbjct: 1099 ATEGRESAHPERREQVRPQRRIRQHMPQQKEVVE 1132


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -1

Query: 197 WDFLVQFLICGFIKQHLVVQL-VTNFS 120
           W F VQF+ C  I   L++ + VT FS
Sbjct: 284 WVFFVQFIQCTMIWCSLILYIAVTGFS 310


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 26  GREGFGQTASKNTEEEGRIR 85
           G  GFGQ  + NT+ EG ++
Sbjct: 505 GIVGFGQYCAANTDPEGAMK 524


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,200
Number of Sequences: 2352
Number of extensions: 12600
Number of successful extensions: 72
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)