Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_C20
         (498 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06617-1|CAA29834.1|  158|Homo sapiens protein ( Human mRNA for ...   191   1e-48
BC100025-1|AAI00026.1|  158|Homo sapiens RPS11 protein protein.       191   1e-48
BC070224-1|AAH70224.1|  158|Homo sapiens ribosomal protein S11 p...   191   1e-48
BC016378-1|AAH16378.1|  158|Homo sapiens ribosomal protein S11 p...   191   1e-48
BC010028-1|AAH10028.1|  158|Homo sapiens ribosomal protein S11 p...   191   1e-48
BC007945-1|AAH07945.1|  158|Homo sapiens RPS11 protein protein.       191   1e-48
BC007603-1|AAH07603.1|  158|Homo sapiens ribosomal protein S11 p...   191   1e-48
BC007283-1|AAH07283.1|  158|Homo sapiens ribosomal protein S11 p...   191   1e-48
AB028893-2|BAA88215.1|  158|Homo sapiens ribosomal protein S11 p...   191   1e-48
AB007152-1|BAA25818.1|   83|Homo sapiens ribosomal protein S11 p...    90   3e-18
AK000368-1|BAA91116.1|  251|Homo sapiens protein ( Homo sapiens ...    29   6.8  
AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein.     29   6.8  

>X06617-1|CAA29834.1|  158|Homo sapiens protein ( Human mRNA for
           ribosomal protein S11. ).
          Length = 158

 Score =  191 bits (465), Expect = 1e-48
 Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 6/119 (5%)
 Frame = +1

Query: 22  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 183
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 184 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 360
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 119



 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +2

Query: 359 NVEIGDIVTIGECRPLSKTVRFNVLKV 439
           +V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 119 DVQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC100025-1|AAI00026.1|  158|Homo sapiens RPS11 protein protein.
          Length = 158

 Score =  191 bits (465), Expect = 1e-48
 Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 6/119 (5%)
 Frame = +1

Query: 22  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 183
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 184 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 360
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 119



 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +2

Query: 359 NVEIGDIVTIGECRPLSKTVRFNVLKV 439
           +V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 119 DVQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC070224-1|AAH70224.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  191 bits (465), Expect = 1e-48
 Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 6/119 (5%)
 Frame = +1

Query: 22  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 183
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 184 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 360
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 119



 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +2

Query: 359 NVEIGDIVTIGECRPLSKTVRFNVLKV 439
           +V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 119 DVQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC016378-1|AAH16378.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  191 bits (465), Expect = 1e-48
 Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 6/119 (5%)
 Frame = +1

Query: 22  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 183
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 184 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 360
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 119



 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +2

Query: 359 NVEIGDIVTIGECRPLSKTVRFNVLKV 439
           +V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 119 DVQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC010028-1|AAH10028.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  191 bits (465), Expect = 1e-48
 Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 6/119 (5%)
 Frame = +1

Query: 22  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 183
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 184 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 360
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 119



 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +2

Query: 359 NVEIGDIVTIGECRPLSKTVRFNVLKV 439
           +V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 119 DVQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC007945-1|AAH07945.1|  158|Homo sapiens RPS11 protein protein.
          Length = 158

 Score =  191 bits (465), Expect = 1e-48
 Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 6/119 (5%)
 Frame = +1

Query: 22  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 183
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 184 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 360
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 119



 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +2

Query: 359 NVEIGDIVTIGECRPLSKTVRFNVLKV 439
           +V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 119 DVQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC007603-1|AAH07603.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  191 bits (465), Expect = 1e-48
 Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 6/119 (5%)
 Frame = +1

Query: 22  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 183
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 184 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 360
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 119



 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +2

Query: 359 NVEIGDIVTIGECRPLSKTVRFNVLKV 439
           +V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 119 DVQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC007283-1|AAH07283.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  191 bits (465), Expect = 1e-48
 Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 6/119 (5%)
 Frame = +1

Query: 22  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 183
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 184 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 360
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 119



 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +2

Query: 359 NVEIGDIVTIGECRPLSKTVRFNVLKV 439
           +V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 119 DVQIGDIVTVGECRPLSKTVRFNVLKV 145


>AB028893-2|BAA88215.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  191 bits (465), Expect = 1e-48
 Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 6/119 (5%)
 Frame = +1

Query: 22  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 183
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 184 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 360
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 119



 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +2

Query: 359 NVEIGDIVTIGECRPLSKTVRFNVLKV 439
           +V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 119 DVQIGDIVTVGECRPLSKTVRFNVLKV 145


>AB007152-1|BAA25818.1|   83|Homo sapiens ribosomal protein S11
           protein.
          Length = 83

 Score = 90.2 bits (214), Expect = 3e-18
 Identities = 39/44 (88%), Positives = 42/44 (95%)
 Frame = +1

Query: 229 VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 360
           VV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 1   VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 44



 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +2

Query: 359 NVEIGDIVTIGECRPLSKTVRFNVLKV 439
           +V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 44  DVQIGDIVTVGECRPLSKTVRFNVLKV 70


>AK000368-1|BAA91116.1|  251|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20361 fis, clone HEP16789. ).
          Length = 251

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 405 KGLHSPIVTISPISTFPEARRQ 340
           KG+H P + I+P+ST P   R+
Sbjct: 126 KGIHGPFLVIAPLSTIPNWERE 147


>AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein.
          Length = 1967

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 405 KGLHSPIVTISPISTFPEARRQ 340
           KG+H P + I+P+ST P   R+
Sbjct: 251 KGIHGPFLVIAPLSTIPNWERE 272


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,830,069
Number of Sequences: 237096
Number of extensions: 1450800
Number of successful extensions: 6560
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6551
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)