Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_C15
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122264-1|AAM52776.1|  311|Drosophila melanogaster SD14666p pro...   192   3e-49
AE014296-2771|AAF49436.1|  307|Drosophila melanogaster CG4098-PA...   192   3e-49
AE014296-2769|AAF49438.4|  598|Drosophila melanogaster CG18217-P...    71   2e-12
BT010262-1|AAQ23580.1|  239|Drosophila melanogaster RE28434p pro...    34   0.15 

>AY122264-1|AAM52776.1|  311|Drosophila melanogaster SD14666p
           protein.
          Length = 311

 Score =  192 bits (469), Expect = 3e-49
 Identities = 82/151 (54%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
 Frame = +2

Query: 203 YPRSNLKRFPVPDDKVDWSTEYKQYNPPNYTFPGLHGKPYADPEIGDPNFEPLWNSIDGN 382
           YPRS++ R+PV D++V WS  +  Y PP YT P + G+ +ADP +    F P WN +DG 
Sbjct: 51  YPRSSVLRYPVSDEQVFWSEPFPDYCPPAYTAPHIGGQVWADPPLPSDTFWPQWNQLDGQ 110

Query: 383 ISRVSYNGPYQIVNGFPLNPLGRTGICGRGVLGRWGPNHAADPIISRWKRLDNGNMAVG- 559
           ++R S++G Y + NG PLNP+GRTG+ GRG LGRWGPNHAADPI++RWKR D G +    
Sbjct: 111 VNRESFHGAYNVQNGLPLNPIGRTGLTGRGSLGRWGPNHAADPIVTRWKRDDQGAIVANP 170

Query: 560 VNNKPILQFIAIKRGDTGEWAIPGGMVDPGE 652
              K I+Q +AI+R D   WAIPGGMVDPGE
Sbjct: 171 TTGKNIIQMVAIQRSDNKLWAIPGGMVDPGE 201


>AE014296-2771|AAF49436.1|  307|Drosophila melanogaster CG4098-PA
           protein.
          Length = 307

 Score =  192 bits (469), Expect = 3e-49
 Identities = 82/151 (54%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
 Frame = +2

Query: 203 YPRSNLKRFPVPDDKVDWSTEYKQYNPPNYTFPGLHGKPYADPEIGDPNFEPLWNSIDGN 382
           YPRS++ R+PV D++V WS  +  Y PP YT P + G+ +ADP +    F P WN +DG 
Sbjct: 47  YPRSSVLRYPVSDEQVFWSEPFPDYCPPAYTAPHIGGQVWADPPLPSDTFWPQWNQLDGQ 106

Query: 383 ISRVSYNGPYQIVNGFPLNPLGRTGICGRGVLGRWGPNHAADPIISRWKRLDNGNMAVG- 559
           ++R S++G Y + NG PLNP+GRTG+ GRG LGRWGPNHAADPI++RWKR D G +    
Sbjct: 107 VNRESFHGAYNVQNGLPLNPIGRTGLTGRGSLGRWGPNHAADPIVTRWKRDDQGAIVANP 166

Query: 560 VNNKPILQFIAIKRGDTGEWAIPGGMVDPGE 652
              K I+Q +AI+R D   WAIPGGMVDPGE
Sbjct: 167 TTGKNIIQMVAIQRSDNKLWAIPGGMVDPGE 197


>AE014296-2769|AAF49438.4|  598|Drosophila melanogaster CG18217-PA
           protein.
          Length = 598

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = +2

Query: 491 PNHAADPIISRWKRLDNGNMAVG-VNNKPILQFIAIKRGDTGEWAIPGGMVDPGE 652
           PN AADPI++RWKR D G +       K I+Q +AI+R D   WAIPGGMVDPGE
Sbjct: 434 PNPAADPIVTRWKRDDQGAIVANPTTGKNIIQMVAIQRSDNKLWAIPGGMVDPGE 488


>BT010262-1|AAQ23580.1|  239|Drosophila melanogaster RE28434p
           protein.
          Length = 239

 Score = 34.3 bits (75), Expect = 0.15
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
 Frame = +2

Query: 491 PNHAADPIISRWKRLDNGNMAVGVNNKPILQFIAIKRGDTG------EWAIPGGM 637
           PN AADPI++RWKR D G +          +++      T       EW+IP  M
Sbjct: 172 PNPAADPIVTRWKRDDQGAIVANPTTGISYRWLPYSGPTTSCGPFPVEWSIPARM 226


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,365,660
Number of Sequences: 53049
Number of extensions: 688934
Number of successful extensions: 1637
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1630
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)