Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_C14
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF059571-1|AAC17875.1|  822|Drosophila melanogaster faint sausag...    33   0.18 
AE013599-1756|AAF58341.2|  822|Drosophila melanogaster CG17716-P...    33   0.18 
BT025233-1|ABF17924.1|  818|Drosophila melanogaster FI01002p pro...    29   5.1  
AY118369-1|AAM48398.1|  707|Drosophila melanogaster RE11711p pro...    29   5.1  
AF289994-1|AAG02459.1|  818|Drosophila melanogaster thyroid horm...    29   5.1  
AE013599-3354|AAF46815.2|  818|Drosophila melanogaster CG5465-PA...    29   5.1  

>AF059571-1|AAC17875.1|  822|Drosophila melanogaster faint sausage
           protein.
          Length = 822

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
 Frame = +2

Query: 194 AEPADGVLLQSPSTK-LLINDQELGTATLYIT--ENNVIWGGGVSPSGNPAPTIN---LL 355
           A P   V+L  P    LLI+ + L  + L++   EN+ +    VS  GNP PT+    LL
Sbjct: 325 ARPVKLVVLDRPKPPYLLIDSRRLDASNLFVPVKENSELNLACVSEGGNPRPTLTWEVLL 384

Query: 356 YPSISLHA 379
            P +  HA
Sbjct: 385 SPGVDRHA 392


>AE013599-1756|AAF58341.2|  822|Drosophila melanogaster CG17716-PA
           protein.
          Length = 822

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
 Frame = +2

Query: 194 AEPADGVLLQSPSTK-LLINDQELGTATLYIT--ENNVIWGGGVSPSGNPAPTIN---LL 355
           A P   V+L  P    LLI+ + L  + L++   EN+ +    VS  GNP PT+    LL
Sbjct: 325 ARPVKLVVLDRPKPPYLLIDSRRLDASNLFVPVKENSELNLACVSEGGNPRPTLTWEVLL 384

Query: 356 YPSISLHA 379
            P +  HA
Sbjct: 385 SPGVDRHA 392


>BT025233-1|ABF17924.1|  818|Drosophila melanogaster FI01002p
           protein.
          Length = 818

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = +3

Query: 288 KTTSYGAEALVHQVIQLRPSIYSI 359
           KT++ GA+   H+V++L P+++SI
Sbjct: 206 KTSAAGADGPAHEVVELTPALHSI 229


>AY118369-1|AAM48398.1|  707|Drosophila melanogaster RE11711p
           protein.
          Length = 707

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = +3

Query: 288 KTTSYGAEALVHQVIQLRPSIYSI 359
           KT++ GA+   H+V++L P+++SI
Sbjct: 206 KTSAAGADGPAHEVVELTPALHSI 229


>AF289994-1|AAG02459.1|  818|Drosophila melanogaster thyroid hormone
           receptor-associatedprotein TRAP95 protein.
          Length = 818

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = +3

Query: 288 KTTSYGAEALVHQVIQLRPSIYSI 359
           KT++ GA+   H+V++L P+++SI
Sbjct: 206 KTSAAGADGPAHEVVELTPALHSI 229


>AE013599-3354|AAF46815.2|  818|Drosophila melanogaster CG5465-PA
           protein.
          Length = 818

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = +3

Query: 288 KTTSYGAEALVHQVIQLRPSIYSI 359
           KT++ GA+   H+V++L P+++SI
Sbjct: 206 KTSAAGADGPAHEVVELTPALHSI 229


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,259,351
Number of Sequences: 53049
Number of extensions: 440303
Number of successful extensions: 955
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)