Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_C01
         (657 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    26   0.91 
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    26   0.91 
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    26   0.91 
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    26   0.91 
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   2.1  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   2.8  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   3.7  
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    23   6.4  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 218 LDEQVHYDYC*MVLDFSVTSYSDLNH 141
           +D +  YD C   L     SY DLNH
Sbjct: 98  IDNEALYDICFRTLKVPNPSYGDLNH 123


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 218 LDEQVHYDYC*MVLDFSVTSYSDLNH 141
           +D +  YD C   L     SY DLNH
Sbjct: 98  IDNEALYDICFRTLKVPNPSYGDLNH 123


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 218 LDEQVHYDYC*MVLDFSVTSYSDLNH 141
           +D +  YD C   L     SY DLNH
Sbjct: 98  IDNEALYDICFRTLKVPNPSYGDLNH 123


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 218 LDEQVHYDYC*MVLDFSVTSYSDLNH 141
           +D +  YD C   L     SY DLNH
Sbjct: 98  IDNEALYDICFRTLKVPNPSYGDLNH 123


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 176  DFSVTSYSDLNHNIVKRQKLYNGGQCIKLCLYRIDFMI 63
            D S+   ++ N NI    KLY+    IKL + R D +I
Sbjct: 1754 DSSILKRANANANIGSHSKLYSQINIIKLPILRKDRLI 1791


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 38  EVKAYENLQS*NRYDTDITLYTV 106
           EV AY N+   N  +TDIT Y +
Sbjct: 205 EVPAYLNVYEGNPTETDITFYII 227


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 376 SQIFKNHAGPKLKDCFVLTHFRSASIR 456
           +Q+  NH GPK   C +L     +++R
Sbjct: 777 TQLMPNHRGPKTSRCRLLAAVADSTMR 803


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 348 ITSGLWKEMISNLQEPCRTQAERLLCA 428
           + S LW+  + +   PC T + RLL A
Sbjct: 4   LKSPLWQHWLRSSVLPCGTTSNRLLSA 30


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,474
Number of Sequences: 2352
Number of extensions: 15073
Number of successful extensions: 31
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)