Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_B23
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical... 33 0.23
Z83218-4|CAB05690.2| 706|Caenorhabditis elegans Hypothetical pr... 31 0.94
U00058-6|AAA50729.2| 189|Caenorhabditis elegans Hypothetical pr... 31 0.94
AC084158-18|AAK68583.1| 300|Caenorhabditis elegans Hypothetical... 29 2.2
Z68160-4|CAA92292.1| 583|Caenorhabditis elegans Hypothetical pr... 28 5.0
U40415-1|AAK39255.4| 445|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical p... 27 8.8
Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical pr... 27 8.8
>AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical
protein Y39G10AR.17 protein.
Length = 549
Score = 32.7 bits (71), Expect = 0.23
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 389 PPETTPKSSRRLVKSS-IPWTTQTSRRSAPKETKLLEPSLFRKWLYQLNDLRLETKARHK 565
PPE R+ +SS IP T+QT R+ KET +++ R W + +++ + E AR K
Sbjct: 30 PPEELHNILRKRPRSSAIPTTSQTHVRAPRKETDVVD----RIW-HDIDEEQREKLARRK 84
Query: 566 QEPGSVTNQTDNIHI 610
+E Q HI
Sbjct: 85 EEAAKRKEQQPAQHI 99
>Z83218-4|CAB05690.2| 706|Caenorhabditis elegans Hypothetical
protein C31A11.7 protein.
Length = 706
Score = 30.7 bits (66), Expect = 0.94
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Frame = -3
Query: 620 SILICVCYRSDW*RFPALVYVLP*FRVVGR*VGIAIYGTG*VQVAWFL--LGQIVSTFVL 447
++L + Y W R P + L ++G G+A++G +++ WFL +G +V+ F L
Sbjct: 488 NLLYDMIYHKPWIRCPPYLIGL----LIG--YGLAVFGQRKIRIHWFLAVIGWLVA-FGL 540
Query: 446 STGSMT*RVDVN---FWGWFQEVLRFPRSRCGLLWGPDW---GDHRGWG 318
M D + +W F + SR W +H GWG
Sbjct: 541 GMACMFSTYDYDKGAYWSIFARATYYNFSRIAWSIAVSWVIVANHMGWG 589
>U00058-6|AAA50729.2| 189|Caenorhabditis elegans Hypothetical
protein W03A5.5 protein.
Length = 189
Score = 30.7 bits (66), Expect = 0.94
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 423 SSSHRSRGQHKRRDDLPQ--KKPSYLNLACSVNGYT 524
S + S G D P+ + PSYL ++C++NGYT
Sbjct: 85 SENDLSAGAAGASTDFPEVTRTPSYLRISCALNGYT 120
>AC084158-18|AAK68583.1| 300|Caenorhabditis elegans Hypothetical
protein Y69A2AR.9 protein.
Length = 300
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/86 (26%), Positives = 34/86 (39%)
Frame = +2
Query: 230 NSIVYHKSSERLHIPHTRAGRLESTTKLLDPNPGGHPNQDPRGDHTDS*EI*APPETTPK 409
NS S+E T + STT+ +P P P P ++ A T PK
Sbjct: 107 NSTTTASSTEATTFSTTTSDEKTSTTEKTNPGPAPGPGPGPFASSPSPKDVTAEAPTPPK 166
Query: 410 SSRRLVKSSIPWTTQTSRRSAPKETK 487
+++ TTQT R+ P E +
Sbjct: 167 TTK---------TTQTPGRTLPPEER 183
>Z68160-4|CAA92292.1| 583|Caenorhabditis elegans Hypothetical
protein D1046.4 protein.
Length = 583
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 489 SLVSFGADRLDVCVVHGID 433
S++S G DR D C HGID
Sbjct: 530 SIISRGLDRCDTCKKHGID 548
>U40415-1|AAK39255.4| 445|Caenorhabditis elegans Hypothetical
protein K02G10.3 protein.
Length = 445
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -2
Query: 648 RVPRVNYFRFYTDMCMLSV*LVTLPGSCLCLALVSS-RRSLSWYSHLRNRLGSSSLVS 478
R+ ++N+ +F D+C S+ LVT C L L+ R+ L +++ + L SS L S
Sbjct: 65 RLDKINWKKFGIDVCQSSLFLVT--NMCFFLILLCKFRKWLGFFTPITMGLVSSILAS 120
>Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical
protein F25D7.3 protein.
Length = 817
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 459 RDDLPQKKPSYLNLACSVNGYTNLTTYDSKLRQDINKSREASPIRPITYTY-QYRSENNS 635
RDDL K + S +GY NL +++ L ++ + P+ PI Y +Y N S
Sbjct: 654 RDDLMDIKGEIDEGSMSGSGYGNLGIFENTLNSELKR-----PLMPIETIYSKYNLPNAS 708
Query: 636 LL 641
LL
Sbjct: 709 LL 710
>Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 269 IPHTRA--GRLESTTKLLDPNPGGHPNQDPRG 358
+PH A G ++ + + P P HPN+ P+G
Sbjct: 256 MPHGTAIGGGVQPVSNFIPPPPNRHPNEPPQG 287
>Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 269 IPHTRA--GRLESTTKLLDPNPGGHPNQDPRG 358
+PH A G ++ + + P P HPN+ P+G
Sbjct: 256 MPHGTAIGGGVQPVSNFIPPPPNRHPNEPPQG 287
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,241,134
Number of Sequences: 27780
Number of extensions: 292907
Number of successful extensions: 869
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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