Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_B10
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070687-1|AAL48158.1|  413|Drosophila melanogaster RH24774p pro...   100   1e-21
AE014134-548|AAF51152.2|  413|Drosophila melanogaster CG17221-PA...   100   1e-21
AE014134-549|AAF51151.1|  362|Drosophila melanogaster CG17221-PB...    99   2e-21
BT014631-1|AAT27255.1|  890|Drosophila melanogaster SD09860p pro...    34   0.18 
AE014298-2844|AAF48957.1|  890|Drosophila melanogaster CG12202-P...    34   0.18 

>AY070687-1|AAL48158.1|  413|Drosophila melanogaster RH24774p
           protein.
          Length = 413

 Score =  100 bits (240), Expect = 1e-21
 Identities = 51/118 (43%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
 Frame = +2

Query: 269 RMRAWRIHAYGPTTELRLEEA-RVPPLRAPDEILVRVHASSVNPIDVAMIGGYGSKILNT 445
           +MR W++H YG   EL+L E  ++P +R  +E LVR+ A++VNPID+AM+ GYG+ +LN 
Sbjct: 51  KMRGWQLHNYGDIDELQLSEMLKIPQIRCSNECLVRIRATAVNPIDLAMLRGYGATVLNK 110

Query: 446 LRTIESGEGIEFPLIAGRDFCGRS*KGWCGSXXKAWRANLGESYPLIXQGAHSEYVVV 619
           +R +  G+GIEFPLI GR+FCG   +   G          G        G+H+EYV V
Sbjct: 111 MRCL-PGDGIEFPLILGREFCGELVQTGMGVSLPLGSRVWGVVPLQATIGSHAEYVAV 167


>AE014134-548|AAF51152.2|  413|Drosophila melanogaster CG17221-PA,
           isoform A protein.
          Length = 413

 Score =  100 bits (240), Expect = 1e-21
 Identities = 51/118 (43%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
 Frame = +2

Query: 269 RMRAWRIHAYGPTTELRLEEA-RVPPLRAPDEILVRVHASSVNPIDVAMIGGYGSKILNT 445
           +MR W++H YG   EL+L E  ++P +R  +E LVR+ A++VNPID+AM+ GYG+ +LN 
Sbjct: 51  KMRGWQLHNYGDIDELQLSEMLKIPQIRCSNECLVRIRATAVNPIDLAMLRGYGATVLNK 110

Query: 446 LRTIESGEGIEFPLIAGRDFCGRS*KGWCGSXXKAWRANLGESYPLIXQGAHSEYVVV 619
           +R  + G+GIEFPLI GR+FCG   +   G          G        G+H+EYV V
Sbjct: 111 MR-CQPGDGIEFPLILGREFCGELVQTGMGVSLPLGSRVWGVVPLQATIGSHAEYVAV 167


>AE014134-549|AAF51151.1|  362|Drosophila melanogaster CG17221-PB,
           isoform B protein.
          Length = 362

 Score =   99 bits (238), Expect = 2e-21
 Identities = 51/117 (43%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
 Frame = +2

Query: 272 MRAWRIHAYGPTTELRLEEA-RVPPLRAPDEILVRVHASSVNPIDVAMIGGYGSKILNTL 448
           MR W++H YG   EL+L E  ++P +R  +E LVR+ A++VNPID+AM+ GYG+ +LN +
Sbjct: 1   MRGWQLHNYGDIDELQLSEMLKIPQIRCSNECLVRIRATAVNPIDLAMLRGYGATVLNKM 60

Query: 449 RTIESGEGIEFPLIAGRDFCGRS*KGWCGSXXKAWRANLGESYPLIXQGAHSEYVVV 619
           R  + G+GIEFPLI GR+FCG   +   G          G        G+H+EYV V
Sbjct: 61  R-CQPGDGIEFPLILGREFCGELVQTGMGVSLPLGSRVWGVVPLQATIGSHAEYVAV 116


>BT014631-1|AAT27255.1|  890|Drosophila melanogaster SD09860p
           protein.
          Length = 890

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 19/56 (33%), Positives = 27/56 (48%)
 Frame = +2

Query: 239 AASHAEACTGRMRAWRIHAYGPTTELRLEEARVPPLRAPDEILVRVHASSVNPIDV 406
           AAS+ +AC  R +  RI       E +L+E     LRA +E    +H  S  P+ V
Sbjct: 827 AASYQQACHQRFQYARIFRNVEELEAQLQEKEAAKLRAEEEQQQLIHVDSSEPVSV 882


>AE014298-2844|AAF48957.1|  890|Drosophila melanogaster CG12202-PA
           protein.
          Length = 890

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 19/56 (33%), Positives = 27/56 (48%)
 Frame = +2

Query: 239 AASHAEACTGRMRAWRIHAYGPTTELRLEEARVPPLRAPDEILVRVHASSVNPIDV 406
           AAS+ +AC  R +  RI       E +L+E     LRA +E    +H  S  P+ V
Sbjct: 827 AASYQQACHQRFQYARIFRNVEELEAQLQEKEAAKLRAEEEQQQLIHVDSSEPVSV 882


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,127,692
Number of Sequences: 53049
Number of extensions: 442518
Number of successful extensions: 861
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)