Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_B10
         (620 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067618-4|AAY44003.1|  381|Caenorhabditis elegans Hypothetical ...    66   2e-11
Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical pr...    37   0.010
Z81028-4|CAB02692.2|  365|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81028-5|CAI91176.1|  224|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AC090999-11|ABD63207.1|  356|Caenorhabditis elegans Hypothetical...    27   8.2  

>AF067618-4|AAY44003.1|  381|Caenorhabditis elegans Hypothetical
           protein F56H1.6 protein.
          Length = 381

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 46/118 (38%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
 Frame = +2

Query: 272 MRAWRIHAYGPTTELRLEEARVPPLRAPDEILVRVHASSVNPIDVAMIGGYGSKILNTLR 451
           MRAW +   G   EL+  E  +P +  P ++L++V A+SVNPIDV M  GYG + L T +
Sbjct: 18  MRAW-VSENGSGVELK--EVPLPVINKPGQVLLKVKAASVNPIDVDMSQGYGREFLGTWK 74

Query: 452 TIESGEGI--EFPLIAGRDFCGRS*KGWCGSXXK-AWRANLGESYPLIXQGAHSEYVV 616
            IES +     FPLI GRD C    +   G     A    +    P+I  G H+E+VV
Sbjct: 75  KIESCDAAASRFPLIPGRD-CTAVVESVGGDVHNLAPGDEVMAVVPVILPGTHAEFVV 131


>Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical
           protein F39B2.3 protein.
          Length = 328

 Score = 37.1 bits (82), Expect = 0.010
 Identities = 23/79 (29%), Positives = 39/79 (49%)
 Frame = +2

Query: 260 CTGRMRAWRIHAYGPTTELRLEEARVPPLRAPDEILVRVHASSVNPIDVAMIGGYGSKIL 439
           C   MRA  +  +G    +   E+ +P L   +++LVR +A+ VNP+D  +  G   K+ 
Sbjct: 6   CKSSMRAAVVRRFGAPDVIEAVESDMPRLEK-NQVLVRNYAAGVNPVDTYIRAGQYGKLP 64

Query: 440 NTLRTIESGEGIEFPLIAG 496
           N L  +   +G  F  + G
Sbjct: 65  N-LPYVPGKDGAGFVELVG 82


>Z81028-4|CAB02692.2|  365|Caenorhabditis elegans Hypothetical
           protein B0365.5a protein.
          Length = 365

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 505 KITSRYQREFYPFTTFYGSQCV*YFRTITSNH 410
           K T   Q +FY +TTFY   C+ Y       H
Sbjct: 204 KCTQEDQTKFYQYTTFYRIHCIDYEEGYIQEH 235


>Z81028-5|CAI91176.1|  224|Caenorhabditis elegans Hypothetical
           protein B0365.5b protein.
          Length = 224

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 505 KITSRYQREFYPFTTFYGSQCV*Y 434
           K T   Q +FY +TTFY   C+ Y
Sbjct: 64  KCTQEDQTKFYQYTTFYRIHCIDY 87


>Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical
           protein F20B10.1 protein.
          Length = 1180

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -3

Query: 357 SGALSGGTRASSSLNSVVGP*ACIRHALIRPVQAS 253
           +G   GGT  SSS+   +GP  C   A   PV  S
Sbjct: 668 TGLFLGGTTKSSSIEVEIGPLKCRNRATFDPVTFS 702


>AC090999-11|ABD63207.1|  356|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.4 protein.
          Length = 356

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 157 VDNLHFMFLSFLPVIS*LKNVRTAIESCSISC*SLYG 267
           ++N   +F  F+P++     +R  ++  S  C  LYG
Sbjct: 198 IENARLVFEKFIPLVHSFNGIRNHLDKISNHCCPLYG 234


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,421,078
Number of Sequences: 27780
Number of extensions: 226922
Number of successful extensions: 427
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)