Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_B03
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,121... 100 2e-21
07_01_0181 + 1274177-1274200,1274335-1276161,1276519-1277448,127... 98 5e-21
09_01_0007 + 212984-213949 32 0.46
06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881 32 0.46
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 31 0.61
04_04_0483 - 25554531-25554605,25554681-25555644,25555722-255558... 31 1.1
10_08_0974 + 21969713-21971914 29 4.3
12_01_0737 - 6588612-6588922,6595261-6596602,6596639-6596749 28 7.5
09_06_0038 - 20415363-20415883,20415917-20416596,20416858-204169... 28 7.5
05_01_0146 - 953957-956278,956468-956786,957185-957213 28 7.5
12_01_0515 + 4081373-4081622,4081725-4081867,4082061-4082219,408... 27 9.9
10_08_0316 - 16688911-16689044,16689141-16689211,16689303-166893... 27 9.9
09_04_0203 - 15556064-15556561,15557537-15557581,15557852-155582... 27 9.9
03_05_1123 - 30554938-30555075,30555719-30556077,30556136-30556280 27 9.9
03_02_0686 + 10407800-10409501,10409611-10410284 27 9.9
>02_01_0177 +
1214226-1214294,1214707-1214794,1216095-1216308,
1216413-1216738,1216860-1217013,1217377-1217438,
1218078-1218133,1219456-1221279,1221775-1222698,
1222855-1222866
Length = 1242
Score = 99.5 bits (237), Expect = 2e-21
Identities = 52/128 (40%), Positives = 81/128 (63%)
Frame = +2
Query: 269 SDDEEETKRVVRSMKEKRYEELEGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQ 448
SD+ + +RVVRS+K+KR EEL+ + +RN KI D+ + SFE+L K + VV+
Sbjct: 369 SDESDSGQRVVRSLKDKRNEELKITVDQMRNAMKINDWVNLQESFEKLNKQLEK---VVR 425
Query: 449 KEENGVAPRFFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAE 628
E+ P +I+ALV L+D++ A +EA+K +S N+KAL +++QKL+K K +E
Sbjct: 426 VNESSTVPNMYIKALVLLEDFLAEALANKEAKKKMSSSNAKALNAMKQKLKKNNKQYENL 485
Query: 629 ISKFREDP 652
I + RE P
Sbjct: 486 IQECREHP 493
>07_01_0181 +
1274177-1274200,1274335-1276161,1276519-1277448,
1278314-1278367
Length = 944
Score = 98.3 bits (234), Expect = 5e-21
Identities = 51/128 (39%), Positives = 81/128 (63%)
Frame = +2
Query: 269 SDDEEETKRVVRSMKEKRYEELEGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQ 448
SD+ + +RVVRS+K+KR EEL+ + +RN KI D+ + SFE+L K + VV+
Sbjct: 53 SDESDSGQRVVRSLKDKRNEELKITVDQMRNAMKINDWVNLQESFEKLNKQLEK---VVR 109
Query: 449 KEENGVAPRFFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAE 628
E+ P +++ALV L+D++ A +EA+K +S N+KAL +++QKL+K K +E
Sbjct: 110 VNESTTVPNMYVKALVLLEDFLAEALANKEAKKKMSSSNAKALNAMKQKLKKNNKQYENL 169
Query: 629 ISKFREDP 652
I + RE P
Sbjct: 170 IQECREHP 177
>09_01_0007 + 212984-213949
Length = 321
Score = 31.9 bits (69), Expect = 0.46
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 245 APAPVYTFSDDEEETKRVVRSMKEK-RYEELEGIIHSIRNHRKI-KDFSSALASFEELQK 418
AP P+ SD+EEE +S +E + + I+ ++ HR+ + S A F+ELQ
Sbjct: 177 APGPIVLSSDEEEEEPARKKSCRENWSFSDAVKILTALTAHRQAGGELPSGHALFDELQH 236
Query: 419 AYTR 430
+R
Sbjct: 237 QLSR 240
>06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881
Length = 697
Score = 31.9 bits (69), Expect = 0.46
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +2
Query: 269 SDDEEETKRVVRSMKEKRYEELEGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQ 448
S D+E+ K +RS++E+ +E HS HRK+K E++ A+ +A ++
Sbjct: 293 SKDQEKVKAALRSLQEEIEDERHLRKHSESLHRKLK------KELSEMKSAFVKAVKDLE 346
Query: 449 KEE 457
KE+
Sbjct: 347 KEK 349
>10_08_0425 - 17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 281 EETKRVVRSMKEKRYEELEGIIHSIRNHRKIKDFSSALASFEELQKA-YTRAAPVVQKEE 457
+E +R +R KE+ +E+E + IR + + + L + KA +T + P ++K+
Sbjct: 878 KEREREMRKRKEREEQEMERVKLKIRRKEAVSSYQALLVEIIKDPKASWTESKPRLEKDP 937
Query: 458 NGVA 469
G A
Sbjct: 938 QGRA 941
>04_04_0483 -
25554531-25554605,25554681-25555644,25555722-25555847,
25556162-25556331,25556431-25556526
Length = 476
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/98 (21%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = +2
Query: 239 VRAPAPVYTFSDDEEETKRVVRSMKEKRYEELEGIIHSIRNHRKIKDFSSALASFEELQK 418
V +PAP + + EE++ + R+ R + + +++ ++N + K+ + A ++ K
Sbjct: 265 VSSPAPKSSSTSVEEQSPLIQRNNHRDRGQYVRPVLNPVQNMSQWKEVKAQAAPAKKSNK 324
Query: 419 AYTRAAPVV-QKEENGVAPRFFIRALVELDDWVVGAWN 529
+ P V EN + + A L W+V + N
Sbjct: 325 ENVNSVPKVGATPENSIKKEVSVDA--SLSTWLVSSDN 360
>10_08_0974 + 21969713-21971914
Length = 733
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -1
Query: 567 LFPFDRAFRASRSFHAPTTQSSNSTRALMKNLGATPF 457
L PF R+ RA+ + P T S RAL+ G PF
Sbjct: 151 LTPFLRSPRAAAAAQDPATLSKRKLRALLTTPGPAPF 187
>12_01_0737 - 6588612-6588922,6595261-6596602,6596639-6596749
Length = 587
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 278 EEETKRVVRSMKEKRYEELEGIIHSIRNHRKIKDFSSALASF-EELQKAYTRAAPVVQKE 454
++E + K + +LE I +R+ R + FS+ ASF EE + R P + +
Sbjct: 247 KDEALHYFKIYKAEVENQLERKIKRLRSDRGREYFSNEFASFCEEFGIIHERTPPYLP-Q 305
Query: 455 ENGVAPR 475
NGVA R
Sbjct: 306 SNGVAER 312
>09_06_0038 -
20415363-20415883,20415917-20416596,20416858-20416911,
20417440-20417489,20417665-20417800,20419030-20419128,
20419411-20419676
Length = 601
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Frame = +2
Query: 431 AAPVVQKEENGV--APRFFIRALV----ELDDWVVGAWNEREARKALSKGNSKALTSLRQ 592
A P +Q E+ G A R ++++ E+ + W+ R+ ++ LS+ + L S
Sbjct: 92 AGPAIQTEDTGFLRANRLCVQSVDMIVGEIRGGIKSPWSRRKRKRVLSRQQWEGLFSANG 151
Query: 593 KLRKYTKDF 619
KLR K F
Sbjct: 152 KLRDRGKKF 160
>05_01_0146 - 953957-956278,956468-956786,957185-957213
Length = 889
Score = 27.9 bits (59), Expect = 7.5
Identities = 24/98 (24%), Positives = 49/98 (50%)
Frame = +2
Query: 356 RNHRKIKDFSSALASFEELQKAYTRAAPVVQKEENGVAPRFFIRALVELDDWVVGAWNER 535
+ R ++D ++AL+ EE KA + KE++ AL ++ D + + +
Sbjct: 496 KEKRAVEDLTAALS--EESDKAKEAHERYLSKEDDHE------HALAQIGDLKMALKSTK 547
Query: 536 EARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFRED 649
E+ + + + +T LR+ + K EAE++K+RE+
Sbjct: 548 ESYEVMLDEANYDITCLRKNVDK----LEAEVNKYREE 581
>12_01_0515 +
4081373-4081622,4081725-4081867,4082061-4082219,
4082339-4082518,4082616-4082845,4082959-4083099,
4083366-4083420
Length = 385
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 421 IHSSRTGCSKGGEWSCS*ILHKSSCRIGRLGSRSME 528
+HS+ G ++ EWS I HK +G LG R E
Sbjct: 239 VHSALLGIAREAEWSWKIISHKD---VGPLGDRRSE 271
>10_08_0316 -
16688911-16689044,16689141-16689211,16689303-16689354,
16689589-16689685,16689764-16689841,16689938-16690054,
16690172-16690276,16691026-16691100,16691297-16691356,
16691454-16691549,16691838-16691954,16692142-16692260,
16692349-16692490,16694204-16694290,16694852-16694914,
16695081-16695161
Length = 497
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 582 EVRALLFPFDRAFRASRSFHAPTTQSSNSTRALMKNLG 469
E RALL +R AS + APT SN RA +G
Sbjct: 94 EARALLAQAERQIPASMAGAAPTAVVSNGKRAFEDEVG 131
>09_04_0203 -
15556064-15556561,15557537-15557581,15557852-15558258,
15558538-15558841,15559421-15560757,15561492-15561750
Length = 949
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 440 VVQKEENGVAPRFFIRALVELDDWVVGAWNER 535
+++K + RF++ A ELDD+ WN+R
Sbjct: 269 ILEKMNGAIGVRFYVPASKELDDFTT-RWNKR 299
>03_05_1123 - 30554938-30555075,30555719-30556077,30556136-30556280
Length = 213
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 242 VLLARPRCCSLTPSPSQLQRNDS 174
++ +R CCS PSPS QR D+
Sbjct: 3 LMASRCYCCSSPPSPSPKQRRDA 25
>03_02_0686 + 10407800-10409501,10409611-10410284
Length = 791
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 542 RKALSKGNSKALTSLRQKLRKYTKDFEAEIS 634
+ + G A+ LR+K+ K K+FEAE++
Sbjct: 496 KATMENGTFVAVKRLREKIAKNQKEFEAEVN 526
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,603,063
Number of Sequences: 37544
Number of extensions: 256837
Number of successful extensions: 832
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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