Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_B01
(655 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0724 + 27578337-27578371,27578492-27578607,27578717-275788... 132 3e-31
10_08_0381 + 17398972-17399014,17400823-17400981,17401066-174012... 130 9e-31
08_02_1600 + 28133818-28133900,28134240-28134345,28135169-281352... 110 1e-24
07_03_0625 + 20054380-20054434,20054819-20054853,20055387-20055941 31 0.80
02_05_0329 - 27986261-27987372,27988632-27988638,27988999-279891... 30 1.9
08_01_0882 - 8663006-8663068,8663260-8663328,8663410-8663515,866... 29 2.4
09_01_0051 - 862286-864670 29 4.3
08_02_1065 - 24044466-24045276,24045380-24045509,24045833-24045965 28 5.6
07_01_1212 + 11560247-11560684,11560773-11560826,11560926-115609... 28 5.6
11_01_0772 - 6455042-6458107 28 7.5
06_02_0243 - 13433276-13434154,13434192-13434593,13434730-13434750 28 7.5
01_06_0254 + 27915608-27915755,27915837-27916042,27917069-27917305 28 7.5
01_04_0062 - 15563978-15564616,15564687-15565604 28 7.5
06_03_0791 - 24641350-24641418,24641684-24641965,24642318-246425... 27 9.9
06_03_0680 - 23470292-23470384,23470499-23470606,23471145-234713... 27 9.9
06_01_0132 - 1024099-1024824 27 9.9
>04_04_0724 +
27578337-27578371,27578492-27578607,27578717-27578875,
27578954-27579129,27580406-27580683,27580759-27580894,
27580984-27581095,27581177-27581268
Length = 367
Score = 132 bits (318), Expect = 3e-31
Identities = 65/131 (49%), Positives = 87/131 (66%)
Frame = +2
Query: 173 EPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADCAL 352
+P++V+VTGAAGQI Y+++ IA G + G QPV LHLLD+ L GV MEL D AL
Sbjct: 40 KPVKVLVTGAAGQIGYAIVAMIARGLMLGADQPVVLHLLDLPVAANALNGVRMELIDAAL 99
Query: 353 PLLAGVLPTANPEEAFKDVAAAFLVGAMPRKEGMERKDLLAANVRIFKEQGQALDKAARK 532
PLL GV+ T++ EAFK V A ++G PR++GMERKDL++ NV I+K Q AL + A
Sbjct: 100 PLLRGVVATSDEAEAFKGVNVAIVIGGWPRRDGMERKDLISKNVTIYKSQASALHQHAAP 159
Query: 533 DVXVLGCWQPS 565
+ VL P+
Sbjct: 160 NCKVLVVANPA 170
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +3
Query: 546 LVVGNPANTNALICSKYAPSIPKENFTXMNSS*SNR 653
LVV NPANTNAL+ ++AP+IP +N T + NR
Sbjct: 164 LVVANPANTNALVLKEFAPAIPAKNITCLTRLDHNR 199
>10_08_0381 +
17398972-17399014,17400823-17400981,17401066-17401241,
17401565-17401842,17401938-17402073,17402183-17402294,
17402421-17402515
Length = 332
Score = 130 bits (314), Expect = 9e-31
Identities = 66/131 (50%), Positives = 84/131 (64%)
Frame = +2
Query: 173 EPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADCAL 352
EP+RV+VTGAAGQI Y+L+ IA G + G QPV LH+LDI P L G+ MEL D A
Sbjct: 4 EPMRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPATESLNGLKMELVDAAF 63
Query: 353 PLLAGVLPTANPEEAFKDVAAAFLVGAMPRKEGMERKDLLAANVRIFKEQGQALDKAARK 532
PLL G++ T + EA V A +VG PRKEGMERKD+++ NV I+K Q AL+ A
Sbjct: 64 PLLKGIVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEAHAAP 123
Query: 533 DVXVLGCWQPS 565
+ VL P+
Sbjct: 124 NCKVLVVANPA 134
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +3
Query: 546 LVVGNPANTNALICSKYAPSIPKENFTXMNSS*SNR 653
LVV NPANTNALI ++APSIP++N T + NR
Sbjct: 128 LVVANPANTNALILKEFAPSIPEKNITCLTRLDHNR 163
>08_02_1600 +
28133818-28133900,28134240-28134345,28135169-28135255,
28135354-28135438,28135510-28135691,28135921-28135991,
28136078-28136168,28136250-28136324,28136436-28136537,
28136620-28136742,28136823-28136891,28136990-28137058,
28137158-28137211,28137315-28137368
Length = 416
Score = 110 bits (264), Expect = 1e-24
Identities = 60/128 (46%), Positives = 77/128 (60%)
Frame = +2
Query: 179 IRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADCALPL 358
+ V V+GAAG I+ LL+++ASG VFGP QP+ L LL + LEGV MEL D PL
Sbjct: 74 VNVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSLYPL 133
Query: 359 LAGVLPTANPEEAFKDVAAAFLVGAMPRKEGMERKDLLAANVRIFKEQGQALDKAARKDV 538
L V +P F+D A L+GA PR GMER LL N +IF EQG+AL+ A ++V
Sbjct: 134 LREVSIGIDPYVVFEDAEWALLIGAKPRGPGMERSALLDINGQIFAEQGKALNSVASRNV 193
Query: 539 XVLGCWQP 562
V+ P
Sbjct: 194 KVIVVGNP 201
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +3
Query: 546 LVVGNPANTNALICSKYAPSIPKENFTXMNSS*SNR 653
+VVGNP NTNALIC K AP+IP +NF + NR
Sbjct: 196 IVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENR 231
>07_03_0625 + 20054380-20054434,20054819-20054853,20055387-20055941
Length = 214
Score = 31.1 bits (67), Expect = 0.80
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Frame = -2
Query: 564 LGCQQPRTFTSLRAALSKAWPCSLKMRTLAARRSFLSIP---SFLGIAPTRKAAATSLKA 394
+G R +++AA A + R L + S +S+P S IA RK++++
Sbjct: 60 IGSLMTRELEAIKAAPPHATAAATTPRRLRRQSSPVSVPCGASPRKIAALRKSSSSLSTT 119
Query: 393 SSGFAVGR-TPAKSGRAQSA--------NSMTTPSSTPIIGA 295
SSG GR T S SA +S TTP+S+P++ A
Sbjct: 120 SSGGGSGRRTDRVSAEESSACKTAACRRSSSTTPASSPMLAA 161
>02_05_0329 -
27986261-27987372,27988632-27988638,27988999-27989128,
27989157-27989216,27989318-27989970,27990056-27990526
Length = 810
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = -2
Query: 507 WPCSLKMRTLAARRSFLSIPSFLGIAPTRKAAATSLKASSGFAVGR 370
+P L TLAAR +F++ PS + +A K+ +T LKA + V R
Sbjct: 514 YPAHLMPATLAARDTFVARPSDVILATMPKSGSTWLKALAFCVVHR 559
>08_01_0882 -
8663006-8663068,8663260-8663328,8663410-8663515,
8663889-8663944,8664163-8664222,8664310-8664529,
8664561-8664655,8664757-8664882,8664954-8665008,
8666163-8666290
Length = 325
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 155 GNIKMAEPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLE 319
G ++ E +R+ + Q Q+A GA FGP+ P L +DIA + + +
Sbjct: 187 GEPELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELVDVDIATHIDIYD 241
>09_01_0051 - 862286-864670
Length = 794
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -2
Query: 489 MRTLAARRSFLSIPSFLGIAPTRKAAATSLKA 394
MR AA RSFL +PS I T A++ SL A
Sbjct: 1 MRCAAAARSFLPLPSTTRIHTTATASSPSLAA 32
>08_02_1065 - 24044466-24045276,24045380-24045509,24045833-24045965
Length = 357
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = -2
Query: 435 IAPTRKAAATSLKASSGFAVGRTPAKSGRAQSANSMTTP---SSTPIIGA--ISRRWRKT 271
+A AAAT + +G +V TP G + + TTP S P+I + + R
Sbjct: 225 LAAAAAAAATCSSSPAGSSVPITPTAVGHSGGGQTQTTPCAFSEAPVITSDDVEANLRLL 284
Query: 270 GC 265
GC
Sbjct: 285 GC 286
>07_01_1212 +
11560247-11560684,11560773-11560826,11560926-11560985,
11561084-11561227
Length = 231
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = -2
Query: 456 SIPSFLGIAPTRKAAATSLKASSGFAVGRTPAKSGRAQSANSMTTPSSTPIIGAIS 289
S P+F G T A T + A TP+ G +A + TPSSTP GA S
Sbjct: 25 STPAF-GTPSTNPAFGTPSSTPAFGAPSSTPS-FGTPSTAPAFGTPSSTPAFGAPS 78
>11_01_0772 - 6455042-6458107
Length = 1021
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/64 (21%), Positives = 31/64 (48%)
Frame = -1
Query: 361 QKWQSTVGQLHDNTFKYTHHRRNIKKVEEDRLLRSKNCSRRNLIKK*VCNLSGSTSYNNS 182
+K ST+ ++ + HR ++ V D L R CS +++++ ++S + + +
Sbjct: 564 KKGDSTLEEVAEGYLMELVHRNMLQLVYNDELGRVSTCSMHDILRELALSISKAELFGTA 623
Query: 181 YRFS 170
FS
Sbjct: 624 NNFS 627
>06_02_0243 - 13433276-13434154,13434192-13434593,13434730-13434750
Length = 433
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -2
Query: 432 APTRKAAATSLKASSGFAVGRTPAKSGRAQSANSMTTPSSTPIIGAISRRWRK 274
A R++A K SSG + PA+S R+ A ++ P+ GA S + K
Sbjct: 55 AAFRESAGDPRKLSSGMSSRLLPARSMRSTGAGDDGEVAAAPVAGARSLSFSK 107
>01_06_0254 + 27915608-27915755,27915837-27916042,27917069-27917305
Length = 196
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 392 EAFKDVAAAFLVGAMPRKEGMERKDLLA 475
EA+K + VGAM R G RK LLA
Sbjct: 146 EAYKAIDKTVKVGAMHRNTGNHRKSLLA 173
>01_04_0062 - 15563978-15564616,15564687-15565604
Length = 518
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 368 VLPTANPEEAFKDVAAAFLVGAMPRKEGMERKDLLAANVRIFKEQGQALDKAARKD 535
+LP + F AA LV MPR+ ER++++ IF+E ++ A ++
Sbjct: 222 LLPAQCLPDLFPSSRAAMLVSRMPRRMKRERQEMMDFIDDIFQEHHESRAAAGAEE 277
>06_03_0791 -
24641350-24641418,24641684-24641965,24642318-24642537,
24642657-24642776,24643056-24643132,24643220-24643339,
24644121-24644186,24644265-24644479,24645450-24645582,
24646562-24646708,24647301-24647596,24648222-24648319,
24648425-24648471,24649340-24649449,24649663-24649735,
24650795-24650899
Length = 725
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 334 LHDNTFKYTHHRRNIKKVEEDRLLRSKNCSRRNLIKK 224
LH+N +H KK+ E R L + +C R NL+++
Sbjct: 46 LHNNQPYAAYHILKGKKLPESRYLFAMSCFRMNLLRE 82
>06_03_0680 -
23470292-23470384,23470499-23470606,23471145-23471368,
23473628-23473859
Length = 218
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +2
Query: 440 RKEGMERKDLLAANVRIFKEQGQALDKAARKDVXVLGCWQPSQYKCSNMF*ICSIYS 610
R G+ER + L ++ FKEQG + + + + K S F IC Y+
Sbjct: 82 RNTGLERSEQLKKDLEWFKEQGHTIPEPSAPGTTYASYLEELAEKDSQAF-ICHFYN 137
>06_01_0132 - 1024099-1024824
Length = 241
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +2
Query: 155 GNIKMAEPIRVVVTGAAGQIAYSLLYQIASG-AVFGPQQPVFL---HLLDIA 298
GN+ A +R TG GQI Y+ + + +G + P P + LLD+A
Sbjct: 76 GNLTFAFTVRAANTGGFGQIYYTNIKALLAGRSASSPASPTYFVKTGLLDMA 127
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,490,004
Number of Sequences: 37544
Number of extensions: 330313
Number of successful extensions: 1059
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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