Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_A15
(468 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1311 - 26039741-26039930,26040185-26040316,26040528-260406... 50 1e-06
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 38 0.004
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 38 0.005
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 38 0.005
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 38 0.005
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 38 0.005
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 38 0.005
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 37 0.007
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 36 0.012
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 36 0.016
04_04_1163 - 31398565-31398654,31398729-31398812,31398893-313990... 28 3.3
04_03_0922 + 20834195-20836603 28 3.3
06_01_0853 + 6486027-6486158,6486561-6486692,6486974-6486978,648... 27 5.7
08_01_0921 + 9075409-9075511,9075606-9075689,9075744-9075806,907... 27 7.5
07_03_0797 + 21575948-21576042,21576140-21576902,21577134-215773... 27 10.0
04_04_0165 + 23247265-23247472,23248115-23248407,23249182-232492... 27 10.0
01_01_1068 - 8413269-8413589,8414011-8414262,8417472-8417603,841... 27 10.0
>08_02_1311 -
26039741-26039930,26040185-26040316,26040528-26040676,
26040807-26040893,26041338-26041420,26042008-26042137
Length = 256
Score = 49.6 bits (113), Expect = 1e-06
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Frame = +3
Query: 162 PRYITLLSLIVLAVTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLA-YSQYRQTXT 338
P + + +V L+ + + + N+++L GLS SGKT+LF +L S ++ T T
Sbjct: 24 PEQVYVAVAVVAVTVLLLVAVSCLKSSKANTIVLSGLSGSGKTILFYQLRDGSTHQGTVT 83
Query: 339 SMKENIEEYITSN--------KTLKIVDLPGQERLRNKFXEQHKSSAKGIV 467
SM++N + ++ + K + +VD+PG RL+ K E +A GIV
Sbjct: 84 SMEQNNDTFVLHSELERRGKVKPVHVVDVPGHARLKPKLDEVLPQAA-GIV 133
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +3
Query: 207 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTXTSMKENIEEYITSNKT 383
L F +FSR ++ + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 384 LKIVDLPGQERLR 422
+ D+ GQ+++R
Sbjct: 63 FTVWDVGGQDKIR 75
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 207 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTXTSMKENIEEYITSNKT 383
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 126 LAFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 185
Query: 384 LKIVDLPGQERLR 422
+ D+ GQ+++R
Sbjct: 186 FTVWDVGGQDKIR 198
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 207 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTXTSMKENIEEYITSNKT 383
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 384 LKIVDLPGQERLR 422
+ D+ GQ+++R
Sbjct: 63 FTVWDVGGQDKIR 75
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 207 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTXTSMKENIEEYITSNKT 383
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 384 LKIVDLPGQERLR 422
+ D+ GQ+++R
Sbjct: 63 FTVWDVGGQDKIR 75
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 37.5 bits (83), Expect = 0.005
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +3
Query: 255 VLLMGLSDSGKTLLFVRLAYSQYRQTXTSMKENIEEYITSNKTLKIVDLPGQERLR 422
V+++GL +GKT + RL + T ++ N+E+ N + D+ GQE+LR
Sbjct: 20 VVMLGLDAAGKTTILYRLHMGEVLSTVPTVGFNVEKVQYKNVVFTVWDVGGQEKLR 75
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 207 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTXTSMKENIEEYITSNKT 383
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 384 LKIVDLPGQERLR 422
+ D+ GQ+++R
Sbjct: 63 FTVWDVGGQDKIR 75
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +3
Query: 222 IFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQTXTSMKENIEEYITSNKTLKIVDL 401
+F T VL++GL +GKT + RL + + ++ N+E+ N + D+
Sbjct: 8 LFDSFCTKEMKVLMLGLDAAGKTTILYRLHIGEVLSSIPTIGFNVEKVEYKNVAFTVWDV 67
Query: 402 PGQERLR 422
GQ++LR
Sbjct: 68 GGQDKLR 74
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 36.3 bits (80), Expect = 0.012
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +3
Query: 255 VLLMGLSDSGKTLLFVRLAYSQYRQTXTSMKENIEEYITSNKTLKIVDLPGQERLR 422
V+++GL +GKT + +L + T ++ N+E+ N + D+ GQE+LR
Sbjct: 20 VVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVVFTVWDVGGQEKLR 75
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 35.9 bits (79), Expect = 0.016
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +3
Query: 255 VLLMGLSDSGKTLLFVRLAYSQYRQTXTSMKENIEEYITSNKTLKIVDLPGQERLR 422
V+++GL +GKT + +L + T ++ N+E+ N + D+ GQE+LR
Sbjct: 20 VVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVMFTVWDVGGQEKLR 75
>04_04_1163 -
31398565-31398654,31398729-31398812,31398893-31399037,
31399118-31399239,31399338-31399376,31399491-31399601,
31399682-31399804,31399946-31400032,31400136-31400207,
31400349-31400621,31400704-31400895,31400988-31401171,
31401339-31401480,31401578-31401821,31401959-31402603,
31403024-31403293
Length = 940
Score = 28.3 bits (60), Expect = 3.3
Identities = 21/82 (25%), Positives = 35/82 (42%)
Frame = +3
Query: 51 FKXTYYFSDLVSVKRKNSTMESEVVKEKIHTEPILNDPRYITLLSLIVLAVTLIFWWIFS 230
F Y S L K++N + E + + + L + + L++ +FS
Sbjct: 626 FCKEYILSSLERAKKRNRAALGTPKVPNVKWEDV-GGLEEVKKVILDTIQLPLLYKHLFS 684
Query: 231 RRYTLRNSVLLMGLSDSGKTLL 296
+ R+ VLL G +GKTLL
Sbjct: 685 SKLGKRSGVLLYGPPGTGKTLL 706
>04_03_0922 + 20834195-20836603
Length = 802
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 171 ITLLSLIVLAVTLIFWWIFSRRY 239
++ +L +LA+ L+ WW S+RY
Sbjct: 456 LSFAALFMLAIALVIWWNKSKRY 478
>06_01_0853 +
6486027-6486158,6486561-6486692,6486974-6486978,
6487948-6488017,6489456-6489776
Length = 219
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/63 (25%), Positives = 25/63 (39%)
Frame = +3
Query: 255 VLLMGLSDSGKTLLFVRLAYSQYRQTXTSMKENIEEYITSNKTLKIVDLPGQERLRNKFX 434
+L +GL ++GKT LF L+ + EE K DL G R +
Sbjct: 24 ILFLGLDNAGKTTLFYMLSQENLAVHQPTQHPTSEELSIGRIRFKAFDLGGHRIARRVWR 83
Query: 435 EQH 443
+ +
Sbjct: 84 DYY 86
>08_01_0921 +
9075409-9075511,9075606-9075689,9075744-9075806,
9077163-9077181,9078227-9078338,9078902-9078949,
9079372-9079502,9079673-9079757,9079776-9079784
Length = 217
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 207 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTXTS 341
++F +FS + R + +L++GL ++GKT + RL + T S
Sbjct: 3 IVFTRLFSSVFGNREARILVLGLDNAGKTTILYRLQMGEVVSTIPS 48
>07_03_0797 +
21575948-21576042,21576140-21576902,21577134-21577327,
21577667-21577700,21578421-21578485,21579032-21579524
Length = 547
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 292 KVLPESDRPINXTELRRVYLREKIHQNMRVTARTIRLSKV 173
K+LP S +PI +E VY+ EK + V A T+++ +
Sbjct: 264 KLLPRS-KPIEASEPSPVYVEEKQVHQVPVVANTVQVDVI 302
>04_04_0165 +
23247265-23247472,23248115-23248407,23249182-23249239,
23249302-23250014
Length = 423
Score = 26.6 bits (56), Expect = 10.0
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Frame = +3
Query: 87 VKRKNSTMESEVVKEK-IHTEPILNDPRYITLLSLIVLAVTLIFWWIFSRRYTLRNSVLL 263
V+ + VV+E IH + + DPR T L I + V W F R Y L+
Sbjct: 201 VEDSQRQINGTVVEEHDIHLDKL--DPRLATNLHQINILVISTSRWFFRRNYLYEGEELI 258
Query: 264 --MGLSDSGKTLLFVRLAYSQ-YRQTXTSMKENIE 359
+ S+ T V +A + +R ++KE+ E
Sbjct: 259 GCIYCSEDNITSFSVPMAIQRVFRTALKNLKESQE 293
>01_01_1068 -
8413269-8413589,8414011-8414262,8417472-8417603,
8417684-8417812
Length = 277
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = +3
Query: 255 VLLMGLSDSGKTLLFVRLAYSQYRQTXTSMKENIEEYITSNKTLKIVDLPGQERLRNKFX 434
+L +GL ++GKT L L + Q + EE K DL G + R +
Sbjct: 23 ILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWK 82
Query: 435 EQHKSSA 455
+ + A
Sbjct: 83 DYYAKGA 89
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,482,569
Number of Sequences: 37544
Number of extensions: 157928
Number of successful extensions: 457
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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