BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_A15
(468 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 1.6
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 1.6
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 1.6
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 21 5.0
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 5.0
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 21 6.6
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 8.7
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 8.7
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 8.7
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 8.7
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 8.7
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 8.7
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 8.7
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 8.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 8.7
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 8.7
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 1.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 251 VAKSIPSRENPPKYEGYC 198
V +IP+ ENP Y +C
Sbjct: 269 VTAAIPTSENPADYRYFC 286
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 1.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 251 VAKSIPSRENPPKYEGYC 198
V +IP+ ENP Y +C
Sbjct: 269 VTAAIPTSENPADYRYFC 286
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 1.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 251 VAKSIPSRENPPKYEGYC 198
V +IP+ ENP Y +C
Sbjct: 269 VTAAIPTSENPADYRYFC 286
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.4 bits (43), Expect = 5.0
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 276 LIGPLTXLSCEEYTFERKSTKI 211
L+ LT CE FE KST +
Sbjct: 407 LLHALTSGKCEHRPFEPKSTAV 428
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 5.0
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 303 RLAYSQYRQTXTSMKENIEEYITSNKTLKIVDLPGQERLRNK 428
R YS+ R+ +N EY KT K ER R+K
Sbjct: 258 RKRYSRSREREQKSYKNEREYRKYGKTSKERSRDRMERERSK 299
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 21.0 bits (42), Expect = 6.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 455 STTLVLFXEFISQSLLSRQIDYFQC 381
ST + L F S SLL+ + +F C
Sbjct: 132 STIIFLLIRFKSFSLLNFNLLFFNC 156
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 8.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 303 RLAYSQYRQTXTSMKENIEEYITSNKTLKIVDLPGQERLRNK 428
R YS+ R+ + +N EY +T K +ER R+K
Sbjct: 36 RKRYSRSREREQNSYKNEREYRKYRETSKERSRDRRERERSK 77
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.6 bits (41), Expect = 8.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 303 RLAYSQYRQTXTSMKENIEEYITSNKTLKIVDLPGQERLRNK 428
R YS+ R+ + +N EY +T K +ER R+K
Sbjct: 36 RKRYSRSREREQNSYKNEREYRKYRETSKERSRDRRERERSK 77
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 8.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 303 RLAYSQYRQTXTSMKENIEEYITSNKTLKIVDLPGQERLRNK 428
R YS+ R+ + +N EY +T K +ER R+K
Sbjct: 36 RKRYSRSREREQNSYKNEREYRKYRETSKERSRDRRERERSK 77
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 8.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 303 RLAYSQYRQTXTSMKENIEEYITSNKTLKIVDLPGQERLRNK 428
R YS+ R+ + +N EY +T K +ER R+K
Sbjct: 36 RKRYSRSREREQNSYKNEREYRKYRETSKERSRDRRERERSK 77
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 8.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 303 RLAYSQYRQTXTSMKENIEEYITSNKTLKIVDLPGQERLRNK 428
R YS+ R+ + +N EY +T K +ER R+K
Sbjct: 36 RKRYSRSREREQNSYKNEREYRKYRETSKERSRDRRERERSK 77
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 8.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 303 RLAYSQYRQTXTSMKENIEEYITSNKTLKIVDLPGQERLRNK 428
R YS+ R+ + +N EY +T K +ER R+K
Sbjct: 36 RKRYSRSREREQNSYKNEREYRKYRETSKERSRDRRERERSK 77
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 8.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 303 RLAYSQYRQTXTSMKENIEEYITSNKTLKIVDLPGQERLRNK 428
R YS+ R+ + +N EY +T K +ER R+K
Sbjct: 36 RKRYSRSREREQNSYKNEREYRKYRETSKERSRDRRERERSK 77
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 8.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 303 RLAYSQYRQTXTSMKENIEEYITSNKTLKIVDLPGQERLRNK 428
R YS+ R+ + +N EY +T K +ER R+K
Sbjct: 36 RKRYSRSREREQNSYKNEREYRKYRETSKERSRDRRERERSK 77
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.6 bits (41), Expect = 8.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 303 RLAYSQYRQTXTSMKENIEEYITSNKTLKIVDLPGQERLRNK 428
R YS+ R+ + +N EY +T K +ER R+K
Sbjct: 258 RKRYSRSREREQNSYKNEREYRKYRETSKERSRDRRERERSK 299
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 20.6 bits (41), Expect = 8.7
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +3
Query: 312 YSQYRQTXTSMKENIEEYITSNKTL 386
Y ++++ E E Y ++NKTL
Sbjct: 646 YPEFQENVQLCSEISESYSSNNKTL 670
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,382
Number of Sequences: 438
Number of extensions: 2415
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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