Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_A10
(503 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U78084-1|AAB53369.1| 527|Drosophila melanogaster presenilin pro... 63 2e-10
U77934-1|AAB61139.1| 541|Drosophila melanogaster presenilin hom... 63 2e-10
AY061316-1|AAL28864.1| 541|Drosophila melanogaster LD23505p pro... 63 2e-10
AF093402-2|AAD52708.1| 527|Drosophila melanogaster presenilin a... 63 2e-10
AF093402-1|AAD52707.1| 541|Drosophila melanogaster presenilin a... 63 2e-10
AF084184-2|AAC33128.1| 527|Drosophila melanogaster presenilin s... 63 2e-10
AF084184-1|AAC33129.1| 541|Drosophila melanogaster presenilin l... 63 2e-10
AF017024-1|AAD01610.1| 541|Drosophila melanogaster presenilin p... 63 2e-10
AE014296-3364|AAN12132.1| 527|Drosophila melanogaster CG18803-P... 63 2e-10
AE014296-3363|AAF51598.1| 541|Drosophila melanogaster CG18803-P... 63 2e-10
AY118546-1|AAM49915.1| 951|Drosophila melanogaster LD29902p pro... 29 2.7
AE014297-2450|AAF55501.2| 951|Drosophila melanogaster CG7913-PA... 29 2.7
AE014297-2449|AAN13758.1| 984|Drosophila melanogaster CG7913-PB... 29 2.7
AE013599-1208|AAM68744.1| 363|Drosophila melanogaster CG30490-P... 28 6.2
>U78084-1|AAB53369.1| 527|Drosophila melanogaster presenilin
protein.
Length = 527
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +2
Query: 347 PVEPQIEELELKYGARHVIKLFVPVTLCMLVVVATISSINXYS 475
P EE LKYGA+HVIKLFVPV+LCMLVVVATI+SI+ Y+
Sbjct: 87 PTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVATINSISFYN 129
>U77934-1|AAB61139.1| 541|Drosophila melanogaster presenilin
homolog protein.
Length = 541
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +2
Query: 347 PVEPQIEELELKYGARHVIKLFVPVTLCMLVVVATISSINXYS 475
P EE LKYGA+HVIKLFVPV+LCMLVVVATI+SI+ Y+
Sbjct: 87 PTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVATINSISFYN 129
>AY061316-1|AAL28864.1| 541|Drosophila melanogaster LD23505p
protein.
Length = 541
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +2
Query: 347 PVEPQIEELELKYGARHVIKLFVPVTLCMLVVVATISSINXYS 475
P EE LKYGA+HVIKLFVPV+LCMLVVVATI+SI+ Y+
Sbjct: 87 PTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVATINSISFYN 129
>AF093402-2|AAD52708.1| 527|Drosophila melanogaster presenilin a1
protein.
Length = 527
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +2
Query: 347 PVEPQIEELELKYGARHVIKLFVPVTLCMLVVVATISSINXYS 475
P EE LKYGA+HVIKLFVPV+LCMLVVVATI+SI+ Y+
Sbjct: 87 PTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVATINSISFYN 129
>AF093402-1|AAD52707.1| 541|Drosophila melanogaster presenilin a2
protein.
Length = 541
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +2
Query: 347 PVEPQIEELELKYGARHVIKLFVPVTLCMLVVVATISSINXYS 475
P EE LKYGA+HVIKLFVPV+LCMLVVVATI+SI+ Y+
Sbjct: 87 PTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVATINSISFYN 129
>AF084184-2|AAC33128.1| 527|Drosophila melanogaster presenilin
short form protein.
Length = 527
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +2
Query: 347 PVEPQIEELELKYGARHVIKLFVPVTLCMLVVVATISSINXYS 475
P EE LKYGA+HVIKLFVPV+LCMLVVVATI+SI+ Y+
Sbjct: 87 PTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVATINSISFYN 129
>AF084184-1|AAC33129.1| 541|Drosophila melanogaster presenilin long
form protein.
Length = 541
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +2
Query: 347 PVEPQIEELELKYGARHVIKLFVPVTLCMLVVVATISSINXYS 475
P EE LKYGA+HVIKLFVPV+LCMLVVVATI+SI+ Y+
Sbjct: 87 PTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVATINSISFYN 129
>AF017024-1|AAD01610.1| 541|Drosophila melanogaster presenilin
protein.
Length = 541
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +2
Query: 347 PVEPQIEELELKYGARHVIKLFVPVTLCMLVVVATISSINXYS 475
P EE LKYGA+HVIKLFVPV+LCMLVVVATI+SI+ Y+
Sbjct: 87 PTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVATINSISFYN 129
>AE014296-3364|AAN12132.1| 527|Drosophila melanogaster CG18803-PB,
isoform B protein.
Length = 527
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +2
Query: 347 PVEPQIEELELKYGARHVIKLFVPVTLCMLVVVATISSINXYS 475
P EE LKYGA+HVIKLFVPV+LCMLVVVATI+SI+ Y+
Sbjct: 87 PTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVATINSISFYN 129
>AE014296-3363|AAF51598.1| 541|Drosophila melanogaster CG18803-PA,
isoform A protein.
Length = 541
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +2
Query: 347 PVEPQIEELELKYGARHVIKLFVPVTLCMLVVVATISSINXYS 475
P EE LKYGA+HVIKLFVPV+LCMLVVVATI+SI+ Y+
Sbjct: 87 PTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVATINSISFYN 129
>AY118546-1|AAM49915.1| 951|Drosophila melanogaster LD29902p
protein.
Length = 951
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -3
Query: 441 TTSMHNVTGTNSLMTWRAPYFNSSSSICGSTGAAGTRGCWAIEAPDGPPSICST 280
TTS +G+NSL++ A +F++++S S AA A + S +T
Sbjct: 237 TTSTGAASGSNSLVSTLAQHFSAATSAAASAAAAAASSASAASSSSASSSSTAT 290
>AE014297-2450|AAF55501.2| 951|Drosophila melanogaster CG7913-PA,
isoform A protein.
Length = 951
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -3
Query: 441 TTSMHNVTGTNSLMTWRAPYFNSSSSICGSTGAAGTRGCWAIEAPDGPPSICST 280
TTS +G+NSL++ A +F++++S S AA A + S +T
Sbjct: 237 TTSTGAASGSNSLVSTLAQHFSAATSAAASAAAAAASSASAASSSSASSSSTAT 290
>AE014297-2449|AAN13758.1| 984|Drosophila melanogaster CG7913-PB,
isoform B protein.
Length = 984
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -3
Query: 441 TTSMHNVTGTNSLMTWRAPYFNSSSSICGSTGAAGTRGCWAIEAPDGPPSICST 280
TTS +G+NSL++ A +F++++S S AA A + S +T
Sbjct: 237 TTSTGAASGSNSLVSTLAQHFSAATSAAASAAAAAASSASAASSSSASSSSTAT 290
>AE013599-1208|AAM68744.1| 363|Drosophila melanogaster CG30490-PA
protein.
Length = 363
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 385 WGSPCHQTVCACHIVHARSCCNNIIYKFXL 474
W C CACH+ A + CNN + F L
Sbjct: 72 WSCSCFCCCCACHL--ALAACNNNLSDFAL 99
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,421,660
Number of Sequences: 53049
Number of extensions: 407535
Number of successful extensions: 1883
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1883
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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