Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_A05
         (655 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X56597-1|CAA39935.1|  321|Homo sapiens fibrillarin protein.           161   3e-39
CR457069-1|CAG33350.1|  321|Homo sapiens FBL protein.                 161   3e-39
BT020144-1|AAV38946.1|  321|Homo sapiens fibrillarin protein.         161   3e-39
BT006830-1|AAP35476.1|  321|Homo sapiens fibrillarin protein.         161   3e-39
BC019609-1|AAH19609.1|  260|Homo sapiens Unknown (protein for IM...   161   3e-39
BC019260-1|AAH19260.1|  321|Homo sapiens fibrillarin protein.         161   3e-39
BC015218-1|AAH15218.2|  260|Homo sapiens FBL protein protein.         161   3e-39
AC006950-1|AAD15623.1|  227|Homo sapiens FBRL_HUMAN [AA 1- 227] ...   161   3e-39
AC005393-3|AAC28913.1|  318|Homo sapiens FBRL_HUMAN protein.          161   3e-39
M59849-1|AAA52453.1|  321|Homo sapiens fibrillarin protein.           159   8e-39

>X56597-1|CAA39935.1|  321|Homo sapiens fibrillarin protein.
          Length = 321

 Score =  161 bits (390), Expect = 3e-39
 Identities = 71/91 (78%), Positives = 80/91 (87%)
 Frame = +3

Query: 381 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 560
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK+EYR WNPFRSKLA
Sbjct: 86  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 145

Query: 561 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSH 653
           AAI+GGVD IH+ PG++VLYLGAASGTTVSH
Sbjct: 146 AAILGGVDQIHIKPGAKVLYLGAASGTTVSH 176


>CR457069-1|CAG33350.1|  321|Homo sapiens FBL protein.
          Length = 321

 Score =  161 bits (390), Expect = 3e-39
 Identities = 71/91 (78%), Positives = 80/91 (87%)
 Frame = +3

Query: 381 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 560
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK+EYR WNPFRSKLA
Sbjct: 86  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 145

Query: 561 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSH 653
           AAI+GGVD IH+ PG++VLYLGAASGTTVSH
Sbjct: 146 AAILGGVDQIHIKPGAKVLYLGAASGTTVSH 176


>BT020144-1|AAV38946.1|  321|Homo sapiens fibrillarin protein.
          Length = 321

 Score =  161 bits (390), Expect = 3e-39
 Identities = 71/91 (78%), Positives = 80/91 (87%)
 Frame = +3

Query: 381 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 560
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK+EYR WNPFRSKLA
Sbjct: 86  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 145

Query: 561 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSH 653
           AAI+GGVD IH+ PG++VLYLGAASGTTVSH
Sbjct: 146 AAILGGVDQIHIKPGAKVLYLGAASGTTVSH 176


>BT006830-1|AAP35476.1|  321|Homo sapiens fibrillarin protein.
          Length = 321

 Score =  161 bits (390), Expect = 3e-39
 Identities = 71/91 (78%), Positives = 80/91 (87%)
 Frame = +3

Query: 381 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 560
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK+EYR WNPFRSKLA
Sbjct: 86  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 145

Query: 561 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSH 653
           AAI+GGVD IH+ PG++VLYLGAASGTTVSH
Sbjct: 146 AAILGGVDQIHIKPGAKVLYLGAASGTTVSH 176


>BC019609-1|AAH19609.1|  260|Homo sapiens Unknown (protein for
           IMAGE:4538098) protein.
          Length = 260

 Score =  161 bits (390), Expect = 3e-39
 Identities = 71/91 (78%), Positives = 80/91 (87%)
 Frame = +3

Query: 381 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 560
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK+EYR WNPFRSKLA
Sbjct: 25  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 84

Query: 561 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSH 653
           AAI+GGVD IH+ PG++VLYLGAASGTTVSH
Sbjct: 85  AAILGGVDQIHIKPGAKVLYLGAASGTTVSH 115


>BC019260-1|AAH19260.1|  321|Homo sapiens fibrillarin protein.
          Length = 321

 Score =  161 bits (390), Expect = 3e-39
 Identities = 71/91 (78%), Positives = 80/91 (87%)
 Frame = +3

Query: 381 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 560
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK+EYR WNPFRSKLA
Sbjct: 86  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 145

Query: 561 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSH 653
           AAI+GGVD IH+ PG++VLYLGAASGTTVSH
Sbjct: 146 AAILGGVDQIHIKPGAKVLYLGAASGTTVSH 176


>BC015218-1|AAH15218.2|  260|Homo sapiens FBL protein protein.
          Length = 260

 Score =  161 bits (390), Expect = 3e-39
 Identities = 71/91 (78%), Positives = 80/91 (87%)
 Frame = +3

Query: 381 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 560
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK+EYR WNPFRSKLA
Sbjct: 25  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 84

Query: 561 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSH 653
           AAI+GGVD IH+ PG++VLYLGAASGTTVSH
Sbjct: 85  AAILGGVDQIHIKPGAKVLYLGAASGTTVSH 115


>AC006950-1|AAD15623.1|  227|Homo sapiens FBRL_HUMAN [AA 1- 227]
           protein.
          Length = 227

 Score =  161 bits (390), Expect = 3e-39
 Identities = 71/91 (78%), Positives = 80/91 (87%)
 Frame = +3

Query: 381 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 560
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK+EYR WNPFRSKLA
Sbjct: 86  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 145

Query: 561 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSH 653
           AAI+GGVD IH+ PG++VLYLGAASGTTVSH
Sbjct: 146 AAILGGVDQIHIKPGAKVLYLGAASGTTVSH 176


>AC005393-3|AAC28913.1|  318|Homo sapiens FBRL_HUMAN protein.
          Length = 318

 Score =  161 bits (390), Expect = 3e-39
 Identities = 71/91 (78%), Positives = 80/91 (87%)
 Frame = +3

Query: 381 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 560
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK+EYR WNPFRSKLA
Sbjct: 83  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 142

Query: 561 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSH 653
           AAI+GGVD IH+ PG++VLYLGAASGTTVSH
Sbjct: 143 AAILGGVDQIHIKPGAKVLYLGAASGTTVSH 173


>M59849-1|AAA52453.1|  321|Homo sapiens fibrillarin protein.
          Length = 321

 Score =  159 bits (386), Expect = 8e-39
 Identities = 71/91 (78%), Positives = 79/91 (86%)
 Frame = +3

Query: 381 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 560
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK EYR WNPFRSKLA
Sbjct: 86  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKFEYRAWNPFRSKLA 145

Query: 561 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSH 653
           AAI+GGVD IH+ PG++VLYLGAASGTTVSH
Sbjct: 146 AAILGGVDQIHIKPGAKVLYLGAASGTTVSH 176


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,432,767
Number of Sequences: 237096
Number of extensions: 1146630
Number of successful extensions: 2247
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2247
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)