Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_A04
         (656 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr...    33   0.13 
Z48245-1|CAA88290.1|  356|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z81043-1|CAB02799.1|  755|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z66521-16|CAA91396.2|  793|Caenorhabditis elegans Hypothetical p...    29   3.8  
AF188715-1|AAF05590.1|  793|Caenorhabditis elegans alanyl-tRNA s...    29   3.8  
U97017-4|AAB52358.1|  156|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z68106-5|CAA92129.1|  557|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AC025723-13|AAK29939.1|  286|Caenorhabditis elegans Hypothetical...    28   6.7  
AF038612-3|AAB92045.2|  432|Caenorhabditis elegans Hypothetical ...    27   8.9  
AC098856-7|AAL27253.2|  155|Caenorhabditis elegans Hypothetical ...    27   8.9  

>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
           protein ZK287.4 protein.
          Length = 1208

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
 Frame = +1

Query: 145 IPYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPP-YGTSIKIAPVTTETEMN 321
           IP+ ++ +         ++K  ++ +G  V+ YQ T  + PP Y +S    P     E+ 
Sbjct: 456 IPFGQVEQQPIPMNPFGSAKPTVNKFGMKVEPYQTTDYMLPPGYPSSSIYLPQPAYPEVK 515

Query: 322 KETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADT 441
             + + ++STQ Q       +P         T T+ D  +
Sbjct: 516 PNSSVILSSTQSQNNTSPQTIPASASVTNSATSTVVDTSS 555


>Z48245-1|CAA88290.1|  356|Caenorhabditis elegans Hypothetical
           protein T27D1.3 protein.
          Length = 356

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
 Frame = -1

Query: 455 ICHLAVS--ASCIVSVPIYLKSVMSGSTDWMSWS*SCVELTCRHVS-LFISVSVVTGAI 288
           + +LAV+  A+ I ++P ++  V  GSTDW+  S  C    CR++  +F+  S+ T  I
Sbjct: 57  LLNLAVADLANLIFTIPEWIPPVFFGSTDWLFPSFLCP--VCRYLECVFLFASISTQMI 113


>Z81043-1|CAB02799.1|  755|Caenorhabditis elegans Hypothetical
           protein C29F3.1 protein.
          Length = 755

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 295 PVTTETEMNKETCLQVNSTQDQLQDIQSV 381
           P TTE  +NK    ++N T D+LQ  QSV
Sbjct: 49  PNTTENVLNKALFAEMNETLDRLQSDQSV 77


>Z66521-16|CAA91396.2|  793|Caenorhabditis elegans Hypothetical
           protein W02B12.6a protein.
          Length = 793

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
 Frame = +1

Query: 151 YAELHEPFYAWYDSKN-----SKSRI-DYYGGMVKTYQFTSAVYPPYGTSIKIAPVTTET 312
           ++EL + FY ++ SKN     S S I D   G   T  FT+A    +   I ++   +  
Sbjct: 24  HSELRKSFYEFFKSKNHEILRSSSVIPDENDG---TLLFTNAGMNQFKPLI-LSSTESRR 79

Query: 313 EMNKETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDA 435
             N + C++     + L D+   L   T F+ +G  +  DA
Sbjct: 80  VANIQKCIRAGGKHNDLDDVGKDLHHQTFFEMMGNWSFNDA 120


>AF188715-1|AAF05590.1|  793|Caenorhabditis elegans alanyl-tRNA
           synthetase protein.
          Length = 793

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
 Frame = +1

Query: 151 YAELHEPFYAWYDSKN-----SKSRI-DYYGGMVKTYQFTSAVYPPYGTSIKIAPVTTET 312
           ++EL + FY ++ SKN     S S I D   G   T  FT+A    +   I ++   +  
Sbjct: 24  HSELRKSFYEFFKSKNHEILRSSSVIPDENDG---TLLFTNAGMNQFKPLI-LSSTESRR 79

Query: 313 EMNKETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDA 435
             N + C++     + L D+   L   T F+ +G  +  DA
Sbjct: 80  VANIQKCIRAGGKHNDLDDVGKDLHHQTFFEMMGNWSFNDA 120


>U97017-4|AAB52358.1|  156|Caenorhabditis elegans Hypothetical
           protein F47B3.3 protein.
          Length = 156

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = -3

Query: 285 YRSTVGWVDR*RELVSLDHTSIVIDS*FAVLTVVPSIEWLMQFS----IGYI*ESLYCVY 118
           Y + VGW      +     TS++    F V+  +PSI W++  S    I    E +YC  
Sbjct: 22  YYTGVGWATFVSSVGIFVTTSLLTLYLFRVVDTLPSINWIVCLSTRTEIIIFQEMVYCFA 81

Query: 117 WT 112
           WT
Sbjct: 82  WT 83


>Z68106-5|CAA92129.1|  557|Caenorhabditis elegans Hypothetical
           protein F41E7.6 protein.
          Length = 557

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +1

Query: 325 ETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADTAK 447
           +TCLQ  S+Q++   +Q V+P   +F   G+ + + ++  +
Sbjct: 318 KTCLQAESSQNKSSSMQPVMPVKIEFLLTGSVSQKISEAER 358


>AC025723-13|AAK29939.1|  286|Caenorhabditis elegans Hypothetical
           protein Y54F10AM.11 protein.
          Length = 286

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 23/92 (25%), Positives = 44/92 (47%)
 Frame = +1

Query: 304 TETEMNKETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADTAKWQMVQPVGDKLN 483
           TE E+++ T   +   +D    ++  +PD  D     + T+ D++    ++V+P   ++ 
Sbjct: 182 TEEELDR-TMKMLAPAEDDHSQMELTVPD--DNASGSSGTLGDSEDTGAELVEPELSRIL 238

Query: 484 KYTMWVKYKKTLKGDSVPIPVRYEMKGFNSLL 579
           + T  V  +   +  SVP P  YE  GF+  L
Sbjct: 239 QRTFVVPRRS--RKLSVPEPEEYEEDGFSETL 268


>AF038612-3|AAB92045.2|  432|Caenorhabditis elegans Hypothetical
           protein F13B6.3 protein.
          Length = 432

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 521 FKVFLYLTHIVYLFSLSPTGCTICHLAVSASCIVSV 414
           + V L       LFS SP+G TI ++ V A  + S+
Sbjct: 123 YMVELVKDRFAVLFSKSPSGSTITNITVDADTVFSI 158


>AC098856-7|AAL27253.2|  155|Caenorhabditis elegans Hypothetical
           protein Y37F4.8 protein.
          Length = 155

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -1

Query: 563 PF-ISYRTGMGTESPFKVFLYLTHIVYLFSLSPTGCTIC 450
           PF + + T M   S   VF+ L  I    +L P GCT C
Sbjct: 27  PFRVKHTTNMTFSSTLNVFVLLALISASQALPPKGCTSC 65


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,777,365
Number of Sequences: 27780
Number of extensions: 352248
Number of successful extensions: 1029
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)