Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_A02
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT028843-1|ABI34224.2|  284|Drosophila melanogaster RT01106p pro...    31   1.8  
AE013599-1674|AAF58399.1|  284|Drosophila melanogaster CG4676-PA...    31   1.8  
AY119579-1|AAM50233.1|  634|Drosophila melanogaster LD08709p pro...    29   5.5  
AE014296-984|AAF50757.1|  634|Drosophila melanogaster CG10583-PA...    29   5.5  
AE014298-2300|AAF48549.2|  418|Drosophila melanogaster CG12697-P...    28   9.6  

>BT028843-1|ABI34224.2|  284|Drosophila melanogaster RT01106p
           protein.
          Length = 284

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +3

Query: 216 NYYYNYYFVRFLILGSLLVCFI--IY*CTIPLCHNFNYSTTFIIFQCIV 356
           NY Y +Y++ ++I+GSL    +  IY   + L   + +ST F IF  +V
Sbjct: 138 NYRYFFYYLVYMIIGSLAAAIMESIYLWHLHLDIYWRWSTLFTIFAPVV 186


>AE013599-1674|AAF58399.1|  284|Drosophila melanogaster CG4676-PA
           protein.
          Length = 284

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +3

Query: 216 NYYYNYYFVRFLILGSLLVCFI--IY*CTIPLCHNFNYSTTFIIFQCIV 356
           NY Y +Y++ ++I+GSL    +  IY   + L   + +ST F IF  +V
Sbjct: 138 NYRYFFYYLVYMIIGSLAAAIMESIYLWHLHLDIYWRWSTLFTIFAPVV 186


>AY119579-1|AAM50233.1|  634|Drosophila melanogaster LD08709p
           protein.
          Length = 634

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 291 CTIPLCHNFNYSTTFIIFQCIVRCTGNYNLSIV 389
           C + LC +FN +TT+ +F  I+   G   L+++
Sbjct: 149 CVLQLCKSFNPATTYSVFNEIIASDGAIYLTLL 181


>AE014296-984|AAF50757.1|  634|Drosophila melanogaster CG10583-PA
           protein.
          Length = 634

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 291 CTIPLCHNFNYSTTFIIFQCIVRCTGNYNLSIV 389
           C + LC +FN +TT+ +F  I+   G   L+++
Sbjct: 149 CVLQLCKSFNPATTYSVFNEIIASDGAIYLTLL 181


>AE014298-2300|AAF48549.2|  418|Drosophila melanogaster CG12697-PA
           protein.
          Length = 418

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 201 IAADCNYYYNYYFVRFLILGSLLVCFIIY*CTIPLCHNF 317
           +AA+C        V F I+ SLL C II  C +PL   F
Sbjct: 124 VAAECRRR----MVTFSIMTSLLACLIIMYCVLPLVEIF 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,956,747
Number of Sequences: 53049
Number of extensions: 383316
Number of successful extensions: 822
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)