Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_A01
(335 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC806.07 |ndk1||nucleoside diphosphate kinase|Schizosaccharomy... 72 3e-14
SPCC1840.05c |||phosphomannomutase |Schizosaccharomyces pombe|ch... 27 0.77
SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosa... 27 0.77
SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase |Schizo... 27 0.77
SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|c... 27 1.0
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 26 1.3
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 24 5.4
SPCC1281.07c |||glutathione S-transferase Gst3|Schizosaccharomyc... 24 5.4
SPCC613.03 |||conserved fungal protein|Schizosaccharomyces pombe... 24 7.1
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 23 9.4
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 23 9.4
>SPAC806.07 |ndk1||nucleoside diphosphate kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 151
Score = 71.7 bits (168), Expect = 3e-14
Identities = 31/50 (62%), Positives = 41/50 (82%)
Frame = +3
Query: 84 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSE 233
E+TFI VKPD VQRGL+G II +FE KG+KL LKF+ PS +L+++HY+E
Sbjct: 4 EQTFIAVKPDAVQRGLIGYIISKFELKGYKLRALKFLVPSRDLVEEHYAE 53
>SPCC1840.05c |||phosphomannomutase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 587
Score = 27.1 bits (57), Expect = 0.77
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 152 FRKERLQTSRFEIRMAIRRTSPATLQRIWHP--GLSSLGL 265
F+ ++ +T+R E+ I+ ATL++I HP G + GL
Sbjct: 13 FKLDQDETTRNEVSQLIKAEDYATLKQIMHPRIGFGTSGL 52
>SPBC1685.08 |||histone deacetylase complex subunit
Cti6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 424
Score = 27.1 bits (57), Expect = 0.77
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = -2
Query: 214 RSSSDGHTNFKPTSLKPFFSKRSIMVPTRPRCTPSGLTIIKVRSRCSAIMKYXXRAQLTT 35
R S + N + L P + T+P+ S +T+ ++R R +++++Y Q+
Sbjct: 322 RGKSSSNDNHRIPQLHP--DGTFVETITKPKGLHSRITMTEMRRRVASMLEYIGHIQVEM 379
Query: 34 RALQPGN 14
A GN
Sbjct: 380 AAQSAGN 386
>SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 350
Score = 27.1 bits (57), Expect = 0.77
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -1
Query: 215 EKFF*WPYE--FQTD*FEAFLFETFNNGAHKTTLYTIRLNHNKSTLTLFRHHEILXTCSI 42
++F W Y+ ++ D L ET N K T+RL H L+LF +L TC +
Sbjct: 283 DQFTDWLYQRWYEKDKLIDTLLETGNFPGPKKLHTTVRLKHRLEILSLF---SVLFTCIV 339
>SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1077
Score = 26.6 bits (56), Expect = 1.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 107 LNHNKSTLTLFRHHEILXTCSINYTCTTAW 18
L+H K+T++L +++ +N+TC W
Sbjct: 816 LSHMKATISLEGYNDCSEFTGVNFTCEVDW 845
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 26.2 bits (55), Expect = 1.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 169 KPFFSKRSIMVPTRPRCTPSGLT 101
KPF +KRS ++P RP T L+
Sbjct: 512 KPFVNKRSKVLPLRPSVTHDNLS 534
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 24.2 bits (50), Expect = 5.4
Identities = 9/32 (28%), Positives = 13/32 (40%)
Frame = -2
Query: 241 MPNSL*CCWRSSSDGHTNFKPTSLKPFFSKRS 146
+P + C WR H+ + KP F S
Sbjct: 158 VPGEIRCIWRKGKKCHSAYISERTKPIFRSES 189
>SPCC1281.07c |||glutathione S-transferase Gst3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 313
Score = 24.2 bits (50), Expect = 5.4
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -1
Query: 164 FLFETFNNGAHKTTLYTIRLNHNKSTLTLFR 72
+ ++T NNG +KT T + K+ +F+
Sbjct: 174 YFYDTVNNGVYKTGFATTAEAYEKNVRVVFQ 204
>SPCC613.03 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 189
Score = 23.8 bits (49), Expect = 7.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 166 PFFSKRSIMVPTRPRCTPSG 107
PF K ++V +C PSG
Sbjct: 71 PFVKKNEVLVDVLKKCDPSG 90
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 23.4 bits (48), Expect = 9.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 178 TSLKPFFSKRSIMVPT 131
TS P++S SI+VPT
Sbjct: 505 TSSSPYYSNSSIIVPT 520
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 23.4 bits (48), Expect = 9.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 211 SSSDGHTNFKPTSLKPFFSKRSIMVPT 131
+SSD H PTS + F KR+ VPT
Sbjct: 295 TSSDSH----PTSTEDFGDKRASTVPT 317
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,288,680
Number of Sequences: 5004
Number of extensions: 22603
Number of successful extensions: 60
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 95984434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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