Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_A01
         (335 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13107-1|CAA31500.1|  153|Drosophila melanogaster protein ( Dros...    99   2e-21
AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p pro...    99   2e-21
AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA...    99   2e-21
BT001459-1|AAN71214.1|  118|Drosophila melanogaster GM19775p pro...    97   7e-21
X85331-1|CAA59680.1|  437|Drosophila melanogaster msh protein.         33   0.092
AY069763-1|AAL39908.1|  387|Drosophila melanogaster RE01365p pro...    32   0.16 
AF202050-1|AAF20908.1|  244|Drosophila melanogaster nmdyn-D7 pro...    32   0.16 
AE014297-999|AAF54425.1|  387|Drosophila melanogaster CG8362-PA ...    32   0.16 
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA...    27   6.0  

>X13107-1|CAA31500.1|  153|Drosophila melanogaster protein (
           Drosophila melanogasterawd mRNA ( abnormal wing disc ).
           ).
          Length = 153

 Score = 98.7 bits (235), Expect = 2e-21
 Identities = 44/63 (69%), Positives = 51/63 (80%)
 Frame = +3

Query: 69  MAEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSEFGIXA 248
           MA  +ERTFIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY++     
Sbjct: 1   MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARP 60

Query: 249 FLP 257
           F P
Sbjct: 61  FFP 63



 Score = 44.0 bits (99), Expect = 5e-05
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = +1

Query: 229 ANLASXPFFPGSXKXMNSGPVVPMVLEG 312
           A+L++ PFFPG    MNSGPVVPMV EG
Sbjct: 54  ADLSARPFFPGLVNYMNSGPVVPMVWEG 81


>AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p
           protein.
          Length = 153

 Score = 98.7 bits (235), Expect = 2e-21
 Identities = 44/63 (69%), Positives = 51/63 (80%)
 Frame = +3

Query: 69  MAEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSEFGIXA 248
           MA  +ERTFIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY++     
Sbjct: 1   MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARP 60

Query: 249 FLP 257
           F P
Sbjct: 61  FFP 63



 Score = 44.0 bits (99), Expect = 5e-05
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = +1

Query: 229 ANLASXPFFPGSXKXMNSGPVVPMVLEG 312
           A+L++ PFFPG    MNSGPVVPMV EG
Sbjct: 54  ADLSARPFFPGLVNYMNSGPVVPMVWEG 81


>AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA
           protein.
          Length = 172

 Score = 98.7 bits (235), Expect = 2e-21
 Identities = 44/63 (69%), Positives = 51/63 (80%)
 Frame = +3

Query: 69  MAEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSEFGIXA 248
           MA  +ERTFIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY++     
Sbjct: 20  MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARP 79

Query: 249 FLP 257
           F P
Sbjct: 80  FFP 82



 Score = 44.0 bits (99), Expect = 5e-05
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = +1

Query: 229 ANLASXPFFPGSXKXMNSGPVVPMVLEG 312
           A+L++ PFFPG    MNSGPVVPMV EG
Sbjct: 73  ADLSARPFFPGLVNYMNSGPVVPMVWEG 100


>BT001459-1|AAN71214.1|  118|Drosophila melanogaster GM19775p
           protein.
          Length = 118

 Score = 96.7 bits (230), Expect = 7e-21
 Identities = 43/62 (69%), Positives = 50/62 (80%)
 Frame = +3

Query: 72  AEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSEFGIXAF 251
           A  +ERTFIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY++     F
Sbjct: 1   AANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPF 60

Query: 252 LP 257
            P
Sbjct: 61  FP 62



 Score = 44.0 bits (99), Expect = 5e-05
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = +1

Query: 229 ANLASXPFFPGSXKXMNSGPVVPMVLEG 312
           A+L++ PFFPG    MNSGPVVPMV EG
Sbjct: 53  ADLSARPFFPGLVNYMNSGPVVPMVWEG 80


>X85331-1|CAA59680.1|  437|Drosophila melanogaster msh protein.
          Length = 437

 Score = 33.1 bits (72), Expect = 0.092
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 217 WRSSSDGHTNFKPTSLKPFFSKRSIMVPTRPRCTPS 110
           WRS+S  H   K TS    FS  S++  TRPR  P+
Sbjct: 41  WRSASAAHHLHKTTSRLSNFSVASLLADTRPRTPPN 76


>AY069763-1|AAL39908.1|  387|Drosophila melanogaster RE01365p
           protein.
          Length = 387

 Score = 32.3 bits (70), Expect = 0.16
 Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +3

Query: 81  RERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSEFG--IXAFL 254
           +  T  ++KP  ++ GL+G II      GF+L  ++ +  +    ++ Y  +   +  ++
Sbjct: 245 KNTTLAIIKPHSIKDGLLGDIISEILSNGFRLTAMRMILMARINCEEFYEVYRGVVPEYI 304

Query: 255 PWV 263
           P V
Sbjct: 305 PMV 307


>AF202050-1|AAF20908.1|  244|Drosophila melanogaster nmdyn-D7
           protein.
          Length = 244

 Score = 32.3 bits (70), Expect = 0.16
 Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +3

Query: 81  RERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSEFG--IXAFL 254
           +  T  ++KP  ++ GL+G II      GF+L  ++ +  +    ++ Y  +   +  ++
Sbjct: 102 KNTTLAIIKPHSIKDGLLGDIISEILSNGFRLTAMRMILMARINCEEFYEVYRGVVPEYI 161

Query: 255 PWV 263
           P V
Sbjct: 162 PMV 164


>AE014297-999|AAF54425.1|  387|Drosophila melanogaster CG8362-PA
           protein.
          Length = 387

 Score = 32.3 bits (70), Expect = 0.16
 Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +3

Query: 81  RERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSEFG--IXAFL 254
           +  T  ++KP  ++ GL+G II      GF+L  ++ +  +    ++ Y  +   +  ++
Sbjct: 245 KNTTLAIIKPHSIKDGLLGDIISEILSNGFRLTAMRMILMARINCEEFYEVYRGVVPEYI 304

Query: 255 PWV 263
           P V
Sbjct: 305 PMV 307


>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
            protein.
          Length = 2284

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 220  CWRSSSDGHTNFKPTSLKPFFSKRSIMVPTRPRCTP 113
            C+  S D     +P +  P  + R+ + PTRPRC P
Sbjct: 1686 CYPGSPDPEC--QPATYLPPTTSRTTIPPTRPRCYP 1719


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,377,896
Number of Sequences: 53049
Number of extensions: 260446
Number of successful extensions: 436
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)