Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_A01
         (335 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...    69   8e-13
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    29   0.83 
L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical pr...    27   2.5  
Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z81486-8|CAB03990.2|  338|Caenorhabditis elegans Hypothetical pr...    26   7.7  

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score = 68.9 bits (161), Expect = 8e-13
 Identities = 35/71 (49%), Positives = 46/71 (64%)
 Frame = +3

Query: 84  ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSEFGIXAFLPWV 263
           ERTFI +KPDGV RGLVG II RFE++G+KLV LK +  S+  L+ HY +     F P +
Sbjct: 5   ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSL 64

Query: 264 X*XNEFRTCGP 296
               E+ + GP
Sbjct: 65  I---EYMSSGP 72



 Score = 32.7 bits (71), Expect = 0.067
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +1

Query: 232 NLASXPFFPGSXKXMNSGPVVPMVLEG 312
           +L   PFFP   + M+SGPVV MV +G
Sbjct: 54  DLKDKPFFPSLIEYMSSGPVVAMVWQG 80


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 29.1 bits (62), Expect = 0.83
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +1

Query: 247 PFFPGSXKXMNSGPVVPMVLEG 312
           PFFP     M+SGPVV M+ EG
Sbjct: 34  PFFPLLIDYMSSGPVVAMLWEG 55


>L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical
           protein K02D10.4 protein.
          Length = 227

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 131 CGHHY*TFRKERLQTSRFEIRMAIRRTSP 217
           CGH        R +T +FE R+ ++R+SP
Sbjct: 107 CGHPVEVDDHHRRETKKFENRLTLKRSSP 135


>Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical
           protein F12F6.5 protein.
          Length = 1059

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = -3

Query: 309 FQNHRDHRS*IHXFXRPREERPGCQIRCSVAGEVLLMAIRISN 181
           ++  R HRS +  F R  E+    +++C+ A    L+ ++ +N
Sbjct: 231 YEGSRRHRSLVKYFKRREEKFEVVRLKCTKARNEYLLCVKAAN 273


>Z81486-8|CAB03990.2|  338|Caenorhabditis elegans Hypothetical
           protein C53A5.10 protein.
          Length = 338

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 243 GCQIRCSVAGEVLLMAIRISNRLV*SLSFRNVQ 145
           GC  +C+  G  L   I + NRL+  LSF  ++
Sbjct: 114 GCTAKCTWTGSCLTAMILVINRLL-DLSFNRIK 145


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,278,527
Number of Sequences: 27780
Number of extensions: 132183
Number of successful extensions: 252
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 252
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)