Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_P23
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 62 3e-10
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 62 3e-10
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 62 3e-10
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 62 4e-10
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 59 3e-09
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 59 3e-09
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 59 3e-09
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 58 5e-09
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 58 7e-09
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 58 7e-09
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 58 7e-09
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 57 1e-08
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 57 1e-08
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 57 1e-08
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 57 1e-08
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 56 2e-08
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 56 2e-08
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 56 2e-08
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 56 2e-08
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 54 1e-07
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 54 1e-07
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 54 1e-07
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 54 1e-07
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 52 3e-07
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 52 5e-07
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 52 5e-07
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 48 6e-06
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 37 0.011
U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily ass... 33 0.23
DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein. 33 0.23
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 30 1.2
M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein. 30 1.6
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 29 2.2
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 29 2.9
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 29 2.9
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 28 5.0
Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical pr... 28 6.7
U41545-4|AAK39134.1| 665|Caenorhabditis elegans Temporarily ass... 28 6.7
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 27 8.8
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/79 (39%), Positives = 47/79 (59%)
Frame = +3
Query: 309 KDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPE 488
K+KF+V LDVQ F+P+EI VK + +++ ++R+ R Y LP+
Sbjct: 31 KEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETRSDNHGTVAREINRAYKLPDDVDVS 90
Query: 489 TVESRLSSDGVLTITAPRK 545
TV+S L++ GVLTITA +K
Sbjct: 91 TVKSHLATRGVLTITASKK 109
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 62.1 bits (144), Expect = 3e-10
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +3
Query: 315 KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETV 494
++ V++DV F PEE+ V D +++ + R FVR+Y LP G PE +
Sbjct: 56 EYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTGVRPEQI 115
Query: 495 ESRLSSDGVLTI 530
+S LS++GVLT+
Sbjct: 116 KSELSNNGVLTV 127
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 62.1 bits (144), Expect = 3e-10
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +3
Query: 315 KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETV 494
++ V++DV F PEE+ V D +++ + R FVR+Y LP G PE +
Sbjct: 55 EYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTGVRPEQI 114
Query: 495 ESRLSSDGVLTI 530
+S LS++GVLT+
Sbjct: 115 KSELSNNGVLTV 126
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 61.7 bits (143), Expect = 4e-10
Identities = 36/103 (34%), Positives = 51/103 (49%)
Frame = +3
Query: 276 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVR 455
S ++G I D+ KF V LDV HF PE + +K DG + Y+ R F +
Sbjct: 41 SDNIGEQIVNDESKFSVQLDVSHFKPENLKIK-LDGRELKIEGIQETKSEHGYLKRSFSK 99
Query: 456 RYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 584
LPE A +V+S +S++G L I AP+K R +PI
Sbjct: 100 MILLPEDADLPSVKSAISNEGKLQIEAPKK----TNSSRSIPI 138
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 58.8 bits (136), Expect = 3e-09
Identities = 39/124 (31%), Positives = 59/124 (47%)
Frame = +3
Query: 249 RPWRQLAAASRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXX 428
R + + S S I + KF +NL+V F PE++ + DG+ +
Sbjct: 27 RQFTPVCRGSPSESSEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEH 85
Query: 429 XYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRK 608
Y + F R LPE V S LS DG L+I AP+K +A++G R +PI Q PV +
Sbjct: 86 GYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKK--EAIQG-RSIPI-QQAPVEQ 141
Query: 609 EIKD 620
+ +
Sbjct: 142 KTSE 145
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 58.8 bits (136), Expect = 3e-09
Identities = 39/124 (31%), Positives = 59/124 (47%)
Frame = +3
Query: 249 RPWRQLAAASRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXX 428
R + + S S I + KF +NL+V F PE++ + DG+ +
Sbjct: 27 RQFTPVCRGSPSESSEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEH 85
Query: 429 XYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRK 608
Y + F R LPE V S LS DG L+I AP+K +A++G R +PI Q PV +
Sbjct: 86 GYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKK--EAIQG-RSIPI-QQAPVEQ 141
Query: 609 EIKD 620
+ +
Sbjct: 142 KTSE 145
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 58.8 bits (136), Expect = 3e-09
Identities = 39/124 (31%), Positives = 59/124 (47%)
Frame = +3
Query: 249 RPWRQLAAASRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXX 428
R + + S S I + KF +NL+V F PE++ + DG+ +
Sbjct: 27 RQFTPVCRGSPSESSEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEH 85
Query: 429 XYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRK 608
Y + F R LPE V S LS DG L+I AP+K +A++G R +PI Q PV +
Sbjct: 86 GYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKK--EAIQG-RSIPI-QQAPVEQ 141
Query: 609 EIKD 620
+ +
Sbjct: 142 KTSE 145
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 58.0 bits (134), Expect = 5e-09
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = +3
Query: 282 DLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 461
D+ S++ D +F V++D F PEEI VKT D +++ + FVR+Y
Sbjct: 102 DVNSNVVNDDRRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVRKY 161
Query: 462 ALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKG-ERKVPIAQTG 596
LP +++S + + G L + A + A++G ER +PI G
Sbjct: 162 QLPRDVDFNSIQSSIDAKGRLQVEAGKFNNMALQGRERMIPIEGAG 207
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 57.6 bits (133), Expect = 7e-09
Identities = 30/75 (40%), Positives = 39/75 (52%)
Frame = +3
Query: 312 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPET 491
+KF+V LD F P +I VK I++ ++R+ R Y LPE P T
Sbjct: 32 EKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDNRPTEYGIVNREVHRTYKLPEDVDPST 91
Query: 492 VESRLSSDGVLTITA 536
V S L+S GVLTITA
Sbjct: 92 VRSHLNSSGVLTITA 106
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 57.6 bits (133), Expect = 7e-09
Identities = 34/103 (33%), Positives = 50/103 (48%)
Frame = +3
Query: 276 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVR 455
S ++G I D+ KF V LDV HF PE++ ++ DG + Y R F +
Sbjct: 41 SDNIGEQIVNDESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSK 99
Query: 456 RYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 584
LPE +V+S +S++G L I AP+K R +PI
Sbjct: 100 MILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 138
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 57.6 bits (133), Expect = 7e-09
Identities = 35/103 (33%), Positives = 51/103 (49%)
Frame = +3
Query: 276 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVR 455
S ++G + D+ KF V LDV HF PE + +K DG + Y+ R F +
Sbjct: 41 SDNIGEIVN-DESKFSVQLDVSHFKPENLKIKL-DGRELKIEGIQETKSEHGYLKRSFSK 98
Query: 456 RYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 584
LPE A +V+S +S++G L I AP+K R +PI
Sbjct: 99 MILLPEDADLPSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/93 (35%), Positives = 46/93 (49%)
Frame = +3
Query: 306 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 485
D+ KF V LDV HF PE + +K DG + Y+ R F + LPE A
Sbjct: 4 DESKFSVQLDVSHFKPENLKIKL-DGRELKIEGIQETKSEHGYLKRSFSKMILLPEDADL 62
Query: 486 ETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 584
+V+S +S++G L I AP+K R +PI
Sbjct: 63 PSVKSAISNEGKLQIEAPKK----TNSSRSIPI 91
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +3
Query: 300 KADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 479
++D ++ DV ++ PEE++VKT D ++V + R++ + + LP G
Sbjct: 22 ESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGT 80
Query: 480 APETVESRLSSDGVLTITAP 539
PE + S LS+DGVLT+ AP
Sbjct: 81 NPEQISSTLSTDGVLTVEAP 100
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +3
Query: 300 KADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 479
++D ++ DV ++ PEE++VKT D ++V + R++ + + LP G
Sbjct: 119 ESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGT 177
Query: 480 APETVESRLSSDGVLTITAP 539
PE + S LS+DGVLT+ AP
Sbjct: 178 NPEQISSTLSTDGVLTVEAP 197
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +3
Query: 300 KADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 479
++D ++ DV ++ PEE++VKT D ++V + R++ + + LP G
Sbjct: 133 ESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGT 191
Query: 480 APETVESRLSSDGVLTITAP 539
PE + S LS+DGVLT+ AP
Sbjct: 192 NPEQISSTLSTDGVLTVEAP 211
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 56.4 bits (130), Expect = 2e-08
Identities = 35/102 (34%), Positives = 52/102 (50%)
Frame = +3
Query: 315 KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETV 494
KF +NL+V F PE++ + DG+ + Y + F R LPE V
Sbjct: 50 KFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLPEDVDVGAV 108
Query: 495 ESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRKEIKD 620
S LS DG L+I AP+K +A++G R +PI Q PV ++ +
Sbjct: 109 ASNLSEDGKLSIEAPKK--EAIQG-RSIPI-QQAPVEQKTSE 146
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 56.0 bits (129), Expect = 2e-08
Identities = 38/114 (33%), Positives = 53/114 (46%)
Frame = +3
Query: 249 RPWRQLAAASRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXX 428
R + + S S I + KF +NL+V F PE++ + DG +
Sbjct: 27 RQFAPVCRISPSESSEIVNNDQKFAINLNVSQFKPEDLKINL-DGRTLSIQGEQELKTDH 85
Query: 429 XYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 590
Y + F R LPE V S LS DG L+I AP+K +AV+G R +PI Q
Sbjct: 86 GYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKK--EAVQG-RSIPIQQ 136
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/98 (32%), Positives = 47/98 (47%)
Frame = +3
Query: 291 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 470
+SI+ F LDV + + + V D I+V I F RR+ LP
Sbjct: 72 TSIRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGEKEDTYGTIESTFKRRFPLP 131
Query: 471 EGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 584
+ APE+V+S+L++DG LTI A P +G R + I
Sbjct: 132 KAVAPESVQSQLTADGHLTIDAKAPEPKQ-EGARPIQI 168
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 56.0 bits (129), Expect = 2e-08
Identities = 38/114 (33%), Positives = 53/114 (46%)
Frame = +3
Query: 249 RPWRQLAAASRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXX 428
R + + S S I + KF +NL+V F PE++ + DG +
Sbjct: 27 RQFAPVCRISPSESSEIVNNDQKFAINLNVSQFKPEDLKINL-DGRTLSIQGEQELKTDH 85
Query: 429 XYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 590
Y + F R LPE V S LS DG L+I AP+K +AV+G R +PI Q
Sbjct: 86 GYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKK--EAVQG-RSIPIQQ 136
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/103 (32%), Positives = 50/103 (48%)
Frame = +3
Query: 276 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVR 455
S ++G + D+ KF V LDV HF PE++ ++ DG + Y R F +
Sbjct: 33 SDNIGEIVN-DESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSK 90
Query: 456 RYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 584
LPE +V+S +S++G L I AP+K R +PI
Sbjct: 91 MILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 129
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/103 (32%), Positives = 50/103 (48%)
Frame = +3
Query: 276 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVR 455
S ++G + D+ KF V LDV HF PE++ ++ DG + Y R F +
Sbjct: 41 SDNIGEIVN-DESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSK 98
Query: 456 RYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 584
LPE +V+S +S++G L I AP+K R +PI
Sbjct: 99 MILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/103 (32%), Positives = 50/103 (48%)
Frame = +3
Query: 276 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVR 455
S ++G + D+ KF V LDV HF PE++ ++ DG + Y R F +
Sbjct: 41 SDNIGEIVN-DESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSK 98
Query: 456 RYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 584
LPE +V+S +S++G L I AP+K R +PI
Sbjct: 99 MILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/103 (32%), Positives = 50/103 (48%)
Frame = +3
Query: 276 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVR 455
S ++G + D+ KF V LDV HF PE++ ++ DG + Y R F +
Sbjct: 41 SDNIGEIVN-DESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSK 98
Query: 456 RYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 584
LPE +V+S +S++G L I AP+K R +PI
Sbjct: 99 MILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/79 (31%), Positives = 40/79 (50%)
Frame = +3
Query: 309 KDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPE 488
+D F+V L+ +F P EI VK ++ + I+R R Y LP+G P
Sbjct: 30 EDHFEVGLEAHNFLPNEIDVKNIGEFLEIHMAHTTKDDKFGSITRSITRCYRLPKGTDPA 89
Query: 489 TVESRLSSDGVLTITAPRK 545
T++S+L G+L I+ +K
Sbjct: 90 TIKSKLDGSGILHISGNKK 108
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = +3
Query: 318 FQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETVE 497
F + +DV HF PEEI V D + + + R F R+Y++P+ +T+
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDDVHLDTIR 163
Query: 498 SRLSSDGVLTITAPRK 545
S L++ GVL I RK
Sbjct: 164 SHLTNSGVLIINGSRK 179
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = +3
Query: 318 FQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETVE 497
F + +DV HF PEEI V D + + + R F R+Y++P+ +T+
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDDVHLDTIR 163
Query: 498 SRLSSDGVLTITAPRK 545
S L++ GVL I RK
Sbjct: 164 SHLTNSGVLIINGSRK 179
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 51.6 bits (118), Expect = 5e-07
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +3
Query: 312 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXX---YISRQFVRRYALPEGAA 482
+KF+V LD F P +I VK I++ ++R+ R Y LPE
Sbjct: 32 EKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREVHRTYKLPEDVD 91
Query: 483 PETVESRLSSDGVLTITA 536
P TV S L+S GVLTITA
Sbjct: 92 PSTVRSHLNSSGVLTITA 109
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 51.6 bits (118), Expect = 5e-07
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +3
Query: 312 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXX---YISRQFVRRYALPEGAA 482
+KF+V LD F P +I VK I++ ++R+ R Y LPE
Sbjct: 32 EKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREVHRTYKLPEDVD 91
Query: 483 PETVESRLSSDGVLTITA 536
P TV S L+S GVLTITA
Sbjct: 92 PSTVRSHLNSSGVLTITA 109
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +3
Query: 306 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 485
D D F+V L+ +F P+EI VK + + +SR R Y LP+
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKNVDM 89
Query: 486 ETVESRLSSDGVLTITA 536
+T++S L S G+L I A
Sbjct: 90 KTIKSNLDSHGILHIEA 106
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +3
Query: 306 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 485
D D F+V L+ +F P+EI VK + + +SR R Y LP+
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKNVDM 89
Query: 486 ETVESRLSSDGVLTITA 536
+T++S L S G+L I A
Sbjct: 90 KTIKSNLDSHGILHIEA 106
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 46.8 bits (106), Expect = 1e-05
Identities = 34/100 (34%), Positives = 47/100 (47%)
Frame = +3
Query: 291 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 470
S I DKF VNL+V +F PEE+ V +G + + F R LP
Sbjct: 43 SEIMNSNDKFAVNLNVSNFKPEELKV-NLEGRQLSIQGEHDVENEHGASRKSFSRMILLP 101
Query: 471 EGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 590
E +V + LS+DG L I AP+ + V G R VP+ +
Sbjct: 102 EDVDITSVATNLSNDGKLCIEAPKL--EGVCG-RSVPVKE 138
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +3
Query: 291 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 470
+ ++ KF V LDV F PEE+ V +G+++ + R F R++ LP
Sbjct: 44 NEVENTAQKFCVKLDVAAFKPEELKVNL-EGHVLTIEGHHEVKTEHGFSKRSFTRQFTLP 102
Query: 471 EGAAPETVESRLSSDGVLTITAPR 542
+ + + ++ +G +TI AP+
Sbjct: 103 KDVDLAHIHTVINKEGQMTIDAPK 126
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/87 (25%), Positives = 35/87 (40%)
Frame = +3
Query: 282 DLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 461
D + I +KF VNL+V PEE+ + + + ++ + +
Sbjct: 39 DCRNEIVDTHEKFSVNLNVPDVKPEELKINLEGRKLSIKAEHQEIENDNISTTQTYSKSI 98
Query: 462 ALPEGAAPETVESRLSSDGVLTITAPR 542
LPE + S LS DG L I P+
Sbjct: 99 VLPEDVDVTHLSSNLSEDGKLLIEVPK 125
>U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 326 protein.
Length = 560
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 529 SPRRGRYPTPSRERE-RCPSHRPVPFARRSRTXAREPRMP 645
SPRR R P+P R+R+ R PS P P R S + R R P
Sbjct: 488 SPRRRRSPSPERQRKRRSPSDSP-PTRRLSTSPIRRRRSP 526
>DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein.
Length = 560
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 529 SPRRGRYPTPSRERE-RCPSHRPVPFARRSRTXAREPRMP 645
SPRR R P+P R+R+ R PS P P R S + R R P
Sbjct: 488 SPRRRRSPSPERQRKRRSPSDSP-PTRRLSTSPIRRRRSP 526
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 31.1 bits (67), Expect = 0.71
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 523 SPSPRRGRYPTPSRERERCPSHRPVPFARRSRTXAREPRMP 645
S SPRR R P + R + P R P RRS + + R P
Sbjct: 475 SRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPSSSSRSRSP 515
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +1
Query: 523 SPSPRRGRYPTPSRE---RERCPSHRPVPFARRSRTXAREPR 639
SP+PRR R P+ S + R R PS RR R+ A PR
Sbjct: 448 SPAPRRRRSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPR 489
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +1
Query: 526 PSPRRGRY-----PTPSRERERCPSHRPVPFARRSRTXAREPRMPK 648
P+P+R + P P R R S P P RR R+ ++ P+ P+
Sbjct: 422 PAPKRAKSRSKSPPAPRRRRSPSQSKSPAP--RRRRSPSKSPQAPR 465
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 523 SPSPRRGRYPTPSRERERCPSHRPVPFARRSRT 621
SPSPRR R P+P ++++R +R P ARR R+
Sbjct: 355 SPSPRRRRSPSPKKDKKR--DYRREP-ARRRRS 384
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 523 SPSPRRGRYPTPSRERERCPSHRPVPFARRSRT 621
SPSPRR R P+P ++++R +R P ARR R+
Sbjct: 355 SPSPRRRRSPSPKKDKKR--DYRREP-ARRRRS 384
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 523 SPSPRRGRYPTPSRERERCPSHRPVPFARRSRT 621
SPSPRR R P+P ++++R +R P ARR R+
Sbjct: 286 SPSPRRRRSPSPKKDKKR--DYRREP-ARRRRS 315
>M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein.
Length = 22
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 306 DKDKFQVNLDVQHFSPEE 359
D+ KF V LDV HF PE+
Sbjct: 5 DESKFSVQLDVSHFKPED 22
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 29.5 bits (63), Expect = 2.2
Identities = 31/96 (32%), Positives = 45/96 (46%)
Frame = +1
Query: 352 RKRFR*RLPTGTSWWKASTKRRKTSTGIFQGSSSDVTRCLKARRLRLWNRGCHQTGFSPS 531
R + R R P ++ ++ +K RK+S+ + S D R + R R +R S
Sbjct: 23 RSQSRQRSPARSNRSRSRSKDRKSSSRRSRSRSRD-RRGDRGDRRRSRSR-------SKD 74
Query: 532 PRRGRYPTPSRERERCPSHRPVPFARRSRTXAREPR 639
R R +PSRER R S RRSRT +R+ R
Sbjct: 75 RRTTRRRSPSRERRRSRSRDRGAPRRRSRTRSRDRR 110
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +1
Query: 301 RPTRTSSKSIWTCSTSRRKRFR*RLPTGTSWWKAST----KRRKTSTGIFQGSSSDVTRC 468
R T T S+S+ + S + R++ R P S + S K R T T SSS ++ C
Sbjct: 933 RDTPTGSRSMRSTSPNDRRKSRETPPGNRSMRRTSPSDGRKSRDTPTASSSMSSSTLSYC 992
Query: 469 LKARRLRLWNRGCHQTGFSPSPRRGRYPTPSRERER 576
K++ + Q + R + +RER+R
Sbjct: 993 KKSKETPMSYEEIEQQKKAKRQRNCKTREENRERKR 1028
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +1
Query: 301 RPTRTSSKSIWTCSTSRRKRFR*RLPTGTSWWKAST----KRRKTSTGIFQGSSSDVTRC 468
R T T S+S+ + S + R++ R P S + S K R T T SSS ++ C
Sbjct: 933 RDTPTGSRSMRSTSPNDRRKSRETPPGNRSMRRTSPSDGRKSRDTPTASSSMSSSTLSYC 992
Query: 469 LKARRLRLWNRGCHQTGFSPSPRRGRYPTPSRERER 576
K++ + Q + R + +RER+R
Sbjct: 993 KKSKETPMSYEEIEQQKKAKRQRNCKTREENRERKR 1028
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 397 KASTKRRKTSTGIFQGSSSDVTRCLKARRLRLWNRGCHQTGFSPSPRRGRYPTPSRE--R 570
++ + RR++ T + S S + + R R +R S R P+P R+ R
Sbjct: 90 RSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSRSPVRESRRRSESRSPSPKRDLKR 149
Query: 571 ERCPSHRPVPFARRSRTXAREP 636
E S P+P RSRT + P
Sbjct: 150 EASRSRSPLPAKDRSRTRSGSP 171
>Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical
protein T06G6.8 protein.
Length = 417
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 205 CWLPSPVQCSPKTTSDRGDNSRLHLVTSAPA*RPTRTS-SKSIWTCSTSRRKRFR*RLPT 381
C P+ +P T S + S + T+ P+ PT+ S ++S+ + ST+ K LPT
Sbjct: 204 CEGPAQTSTAPSTRSSKLPTSSVWKATTTPSDLPTKPSRTRSLTSTSTTTAK-----LPT 258
Query: 382 GTS 390
TS
Sbjct: 259 TTS 261
>U41545-4|AAK39134.1| 665|Caenorhabditis elegans Temporarily
assigned gene nameprotein 52 protein.
Length = 665
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 577 TFLSPLTASGTFLGAVMVRTPSDDSRDS 494
T P T F+G RTP+DD DS
Sbjct: 514 TMTQPYTGLNAFVGTPKSRTPTDDDYDS 541
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 524 HHHRAEEGTRRRQGREKGAHRTDRSRSQGDQ 616
H+HR+ + R R K + ++R R +GD+
Sbjct: 577 HNHRSRSRSSERDRRRKRSRSSERRRDRGDR 607
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,831,376
Number of Sequences: 27780
Number of extensions: 312405
Number of successful extensions: 1154
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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