Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_P17
(555 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0177 + 20669053-20669055,20669150-20669198,20669680-206699... 138 2e-33
04_03_0970 + 21338072-21338074,21338192-21338240,21338688-213389... 137 5e-33
01_07_0270 - 42417782-42417850,42418207-42418342,42418826-424191... 134 3e-32
01_07_0054 - 40779336-40779599,40779734-40779848,40779998-407801... 31 0.82
05_03_0634 + 16432679-16433076,16433358-16433610,16433993-164342... 30 1.1
06_03_0930 - 26038341-26038508,26039114-26039254,26040799-260408... 30 1.4
06_01_1074 - 8765183-8765278,8765657-8765749,8766520-8766600,876... 29 1.9
08_02_0802 + 21386248-21387468 29 2.5
07_03_1296 + 25583195-25584385 29 2.5
01_05_0305 + 20659199-20660026,20660147-20660179 29 2.5
03_06_0519 - 34481751-34482722 29 3.3
02_05_0460 - 29224525-29224620,29225525-29226625 28 4.4
12_02_0020 - 12388777-12389062,12389637-12389818 28 5.8
03_05_0528 - 25268396-25269217 28 5.8
03_05_0110 + 20910084-20910187,20910255-20910303,20911334-209114... 28 5.8
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 28 5.8
08_02_0955 + 22994266-22995630 27 7.6
>02_04_0177 +
20669053-20669055,20669150-20669198,20669680-20669962,
20670526-20670661,20671014-20671094
Length = 183
Score = 138 bits (335), Expect = 2e-33
Identities = 77/162 (47%), Positives = 99/162 (61%), Gaps = 7/162 (4%)
Frame = +1
Query: 55 PNKTXVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWR 234
P K I +YLF+EGV+ AKKDY+ KH +++ +PNLQVIK MQS KS+ YV+E F+W+
Sbjct: 4 PKKNRNEICKYLFQEGVLYAKKDYNLAKHPQID-VPNLQVIKLMQSFKSKEYVRETFSWQ 62
Query: 235 HFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRT--ETVRRGPVG-RPDAPARSAEDRS 405
++YWYLTN+GIE+LR +L+LP EIVPATLK+S R GP G RP P R DR
Sbjct: 63 YYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGDRP 122
Query: 406 AYRRTPAAPGVAPHDKKADVG--PGSADLEFKGGY--GRGRP 519
+ G P D G G A EF+ + GRP
Sbjct: 123 RFGDRDGYRG-GPRGAPGDFGGEKGGAPAEFQPSFRSSGGRP 163
>04_03_0970 +
21338072-21338074,21338192-21338240,21338688-21338970,
21339570-21339705,21339761-21339769
Length = 159
Score = 137 bits (332), Expect = 5e-33
Identities = 74/155 (47%), Positives = 96/155 (61%), Gaps = 5/155 (3%)
Frame = +1
Query: 55 PNKTXVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWR 234
P K I +YLF+EGV+ AKKDY+ KH +++ +PNLQVIK MQS KS+ YV+E F+W+
Sbjct: 4 PKKNRNEICKYLFQEGVLYAKKDYNLAKHPQID-VPNLQVIKLMQSFKSKEYVRETFSWQ 62
Query: 235 HFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRT--ETVRRGPVG-RPDAPARSAEDRS 405
++YWYLTN+GIE+LR +L+LP EIVPATLK+S R GP G RP P R DR
Sbjct: 63 YYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGDRP 122
Query: 406 AYRRTPAAPGVAPHDKKADVG--PGSADLEFKGGY 504
+ G P D G G A EF+ +
Sbjct: 123 RFGDRDGYRG-GPRGAPGDFGGEKGGAPAEFQPSF 156
>01_07_0270 -
42417782-42417850,42418207-42418342,42418826-42419108,
42419459-42419507,42419614-42419616
Length = 179
Score = 134 bits (325), Expect = 3e-32
Identities = 71/153 (46%), Positives = 95/153 (62%), Gaps = 5/153 (3%)
Frame = +1
Query: 76 IYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLT 255
I +YLF EGV+ AKKDY+ KH +++ +PNL+VIK MQS KS+ YV+E F+W+H+YWYLT
Sbjct: 11 ICKYLFHEGVLYAKKDYNLAKHPKVD-VPNLEVIKLMQSFKSKEYVRETFSWQHYYWYLT 69
Query: 256 NEGIEYLRIFLHLPPEIVPATLKRSVR--TETVRRGPVG-RPDAPARSAEDRSAYRRTPA 426
N+GIE+LR +L+LP E+VP TLK+S + + GP G RP P R DR +
Sbjct: 70 NDGIEHLRSYLNLPSEVVPNTLKKSAKPPSRPFGSGPPGDRPRGPPRFEGDRPRFGDRDG 129
Query: 427 APGVAPHDKKADVG--PGSADLEFKGGYGRGRP 519
G P D G G A EF+ + RP
Sbjct: 130 YRG-GPRGAPGDFGGEKGGAPAEFQPSFRGSRP 161
>01_07_0054 -
40779336-40779599,40779734-40779848,40779998-40780181,
40780322-40780393,40780485-40780611,40780830-40781011,
40781099-40781249
Length = 364
Score = 30.7 bits (66), Expect = 0.82
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 76 IYEYLFKEGVMVA-KKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYL 252
+Y+ L ++G +VA KK + P H + ++ L I+ + GY +E Y Y+
Sbjct: 84 VYKGLLQDGTIVAIKKRHSPPSHEFIHEVNYLSSIRHRNLVNLLGYCQENGMQMLVYEYV 143
Query: 253 TNEGIE-YLRIFLHLP 297
N + +L H P
Sbjct: 144 PNGSVSTHLHGSSHAP 159
>05_03_0634 +
16432679-16433076,16433358-16433610,16433993-16434291,
16434553-16434729,16435001-16435621,16435690-16435784,
16436000-16436088,16436185-16436250,16436475-16437026,
16437879-16437953,16438305-16438375,16438456-16438513,
16441506-16442048
Length = 1098
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Frame = +1
Query: 175 IKAMQSLKSRGYVKEQFAWRH---FYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTET 345
I + L S G WR F+ YLT E I YL +HL + +T RS+ +
Sbjct: 605 ISSNAQLDSPGSANSSPFWRQVEPFFSYLTTEDIAYLSQQIHLSDD---STASRSIEGDE 661
Query: 346 VRRGP-----VGRPDAPARSAED 399
R+ + +P PA S +D
Sbjct: 662 SRKYKGSLEYISQPSTPAGSNKD 684
>06_03_0930 -
26038341-26038508,26039114-26039254,26040799-26040858,
26040972-26041034,26041444-26041454,26041722-26041802,
26042783-26043020,26043563-26043997
Length = 398
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 382 ARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSADLEFKGGYGRG 513
AR RS+ RR+P+ G A + G ++ L++ GG G G
Sbjct: 58 ARGKRSRSSRRRSPSGSGSAATKGRWARGSPASPLDYSGGSGSG 101
>06_01_1074 -
8765183-8765278,8765657-8765749,8766520-8766600,
8767092-8767173,8767261-8767313,8767391-8767456,
8767534-8767697,8768028-8768295
Length = 300
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = +1
Query: 388 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSADLEFKGGYGRGRP 519
SA RS R TP P + PH K+A P S L G G P
Sbjct: 3 SAAPRS--RLTPPTPAMHPHRKRARSPPASGSLVRCSSSGNGAP 44
>08_02_0802 + 21386248-21387468
Length = 406
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = -2
Query: 482 SAEPGPTSAFLS*GATPGAAGVRLYADLSSAE-RAGASGRPTGPRRTVSVRTERLSVAGT 306
S P P+S F G V DLS A R + RP GPR + R E +++
Sbjct: 123 SGSPEPSSGFFVAVVVDGEM-VLAAGDLSDAAYRRTRARRPAGPRPVLLSRREHVAMRDA 181
Query: 305 ISGGR 291
GGR
Sbjct: 182 GRGGR 186
>07_03_1296 + 25583195-25584385
Length = 396
Score = 29.1 bits (62), Expect = 2.5
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Frame = +1
Query: 286 LHLPPEIVPATLKRSVR--TETVRRGPVGRPDAPARSAEDRSAYRRTPA---APGVAPHD 450
LHL P PA +KRS R + + P DA R ++ A+ + AP +AP
Sbjct: 76 LHLQPNPDPAEVKRSYRRLSNLLSSNPRPGADAALRCVQEAFAHLSDSSANPAPALAPPP 135
Query: 451 KKADVGPGSA 480
A G SA
Sbjct: 136 APASGGDASA 145
>01_05_0305 + 20659199-20660026,20660147-20660179
Length = 286
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Frame = +1
Query: 286 LHLPPEI-----VPATLKRSVRTETVRRGPVG--RPDAPARSAEDRSAYRRTPAAPGVA 441
L LPP + A S+ TV GP G +P P + +++RR P+A GV+
Sbjct: 122 LKLPPRLQAAAAAAAAADSSLSPNTVLHGPYGGNKPPRPLTRSGSTASHRRKPSAVGVS 180
>03_06_0519 - 34481751-34482722
Length = 323
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 349 RRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSADLEFKGGYGRGRPAS 525
R+G G PA S+ + RR+ G AP D A+ GP S + PA+
Sbjct: 23 RKGKRGAEAPPATSSSTPTTARRSKRLAG-APPDHPAEAGPSSTNARRSSRLAGAPPAT 80
>02_05_0460 - 29224525-29224620,29225525-29226625
Length = 398
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +1
Query: 358 PVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSA 480
PV APA AE S R P P PH A V SA
Sbjct: 270 PVSPASAPAALAESSSEELRPPPLPSSHPHAHAAAVVAASA 310
>12_02_0020 - 12388777-12389062,12389637-12389818
Length = 155
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 361 VGRPDAPARSAEDRSAYRRTPAAP 432
+GRP R E+RS +RTP+ P
Sbjct: 47 IGRPKGEGREWEERSRSQRTPSPP 70
>03_05_0528 - 25268396-25269217
Length = 273
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 469 PGSADLEFKGGYGRG 513
PGS +LE GGYG G
Sbjct: 106 PGSTELEINGGYGEG 120
>03_05_0110 +
20910084-20910187,20910255-20910303,20911334-20911442,
20911597-20911690,20912253-20912386,20912519-20912682,
20912818-20912889
Length = 241
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 52 CPNKTXVAIYEYLFKEGVMVAKK-DYHAPKHTE 147
CP T YEY + +GV + K + APK+ E
Sbjct: 111 CPTMTAGPKYEYRWADGVQIKKPIEVSAPKYVE 143
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 27.9 bits (59), Expect = 5.8
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +1
Query: 334 RTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAP--HDKKADVGPGSADLEFKGGYG 507
R + PV APA + +AY PAAP VAP D G G GG+G
Sbjct: 17 RRSDLAGAPVLAASAPAAANPYAAAYAPAPAAP-VAPAGGDFSRFGGRGRGGGAGGGGWG 75
Query: 508 RG 513
RG
Sbjct: 76 RG 77
>08_02_0955 + 22994266-22995630
Length = 454
Score = 27.5 bits (58), Expect = 7.6
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 488 SRSAEPGPTSAFLS*GATPGAAGVRLYADLSSAERAGASGRPTGPRRT 345
SRS P +A LS +TP +A V A S A A R PRR+
Sbjct: 45 SRSKTPPHNAAVLS--STPASAAVDFVAASDSDAGADADARLASPRRS 90
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,469,834
Number of Sequences: 37544
Number of extensions: 287075
Number of successful extensions: 978
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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