Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_P09
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 108 4e-24
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 51 6e-07
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 51 6e-07
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 46 2e-05
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 46 2e-05
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 43 2e-04
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 43 2e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 42 5e-04
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 40 0.001
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 40 0.001
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 39 0.003
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 39 0.004
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 39 0.004
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 39 0.004
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 39 0.004
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 39 0.004
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 39 0.004
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 39 0.004
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 39 0.004
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 39 0.004
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 38 0.005
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 38 0.008
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 34 0.10
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 34 0.10
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 33 0.23
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 31 0.54
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 31 0.71
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 31 0.71
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 31 0.71
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 0.71
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.94
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 30 1.2
AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical ... 30 1.6
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 29 3.8
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 28 5.0
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z83116-6|CAB05565.2| 302|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81579-5|CAB04654.3| 1305|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81132-11|CAB03426.2| 302|Caenorhabditis elegans Hypothetical p... 28 6.7
AY959881-1|AAX56914.1| 1305|Caenorhabditis elegans nephrocystin-... 28 6.7
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 28 6.7
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 28 6.7
Z70755-7|CAA94787.1| 281|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z70751-2|CAA94753.1| 281|Caenorhabditis elegans Hypothetical pr... 27 8.8
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 108 bits (259), Expect = 4e-24
Identities = 55/168 (32%), Positives = 93/168 (55%), Gaps = 8/168 (4%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
+F++NI YE RW +LK L +EK G+VA+ ELL D +GK +G +VEF E +K + +
Sbjct: 47 VFITNIAYEARWVDLKSLVREKGGEVAFCELLEDRNGKPKGNAVVEFETREGAEKCVENL 106
Query: 348 HRYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRDDKDNWG--------INKPREPEN 503
+++ GR ++ KE T + + +R G +++P
Sbjct: 107 QKFDWKGRTIIAKEIRDPNAFFRTIKTETGIDYLSRTGGGGAGGRGPPPKDLDRPTRTGT 166
Query: 504 LNTYGLSLQFLESINVQPPLVKKVFVANLDYKADQAKIKEVFKMAGKV 647
+ +GL+++FL N++PPL +++F+ANL + K+ EVF MAGK+
Sbjct: 167 YDLFGLNMEFLRQHNIEPPLCERIFIANLAFNVGTDKLYEVFGMAGKI 214
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 51.2 bits (117), Expect = 6e-07
Identities = 29/89 (32%), Positives = 51/89 (57%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
++VSNIP+ FR +L +F G V VE++T+D G ++G G V + E+ +KA +
Sbjct: 53 IYVSNIPFSFREQDLAAMF-FAYGRVLSVEIVTNDRG-SKGFGFVTLDSIESCEKARAAL 110
Query: 348 HRYELNGRKLVLKEETGNERRMHTSRPQH 434
H + GR + ++ T R++ + PQ+
Sbjct: 111 HESHVQGRIIEVRRATPTRRKL-INNPQN 138
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 51.2 bits (117), Expect = 6e-07
Identities = 29/89 (32%), Positives = 51/89 (57%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
++VSNIP+ FR +L +F G V VE++T+D G ++G G V + E+ +KA +
Sbjct: 53 IYVSNIPFSFREQDLAAMF-FAYGRVLSVEIVTNDRG-SKGFGFVTLDSIESCEKARAAL 110
Query: 348 HRYELNGRKLVLKEETGNERRMHTSRPQH 434
H + GR + ++ T R++ + PQ+
Sbjct: 111 HESHVQGRIIEVRRATPTRRKL-INNPQN 138
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 47.2 bits (107), Expect = 1e-05
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKALFV 344
LF+ N+PY + +L+ LFK K G+V+ V+++ D +G +G IVEF EA A
Sbjct: 281 LFLRNLPYATKEDDLQFLFK-KYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSA 339
Query: 345 MHRYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRDDKDN 470
+ Y GR + + G+E+R ++ E DD DN
Sbjct: 340 LDGYVFKGRMMHIL--PGDEKR---TKEGEEESEVVPDDPDN 376
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKAR-------GCGIVEFTNTEAM 326
LFV N+ ++ L+ LF+++ GD+ ++ A G G V+F
Sbjct: 643 LFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQFYTAFDA 702
Query: 327 KKALFVMHRYELNGRKLVLK 386
K AL M L+G L LK
Sbjct: 703 KTALKDMQGELLDGHSLELK 722
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKALFV 344
+FV NI Y+ ++ +F K G+V ++++ D ++GK +G G +EF + + + A+
Sbjct: 20 VFVGNISYDVSEDTIRSIFS-KAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 345 MHRYELNGRKLVLKEETG 398
++ YEL+GR L + G
Sbjct: 79 LNGYELSGRILRVDSAAG 96
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/86 (33%), Positives = 49/86 (56%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
L VSNIP+ FR +LK +F EK G V+ VE++ ++ G ++G G V + ++A +
Sbjct: 155 LHVSNIPFRFRDPDLKTMF-EKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAERARQEL 212
Query: 348 HRYELNGRKLVLKEETGNERRMHTSR 425
H + GRK+ + T R+H+ +
Sbjct: 213 HGSMIEGRKIEVNCATA---RVHSKK 235
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/86 (33%), Positives = 49/86 (56%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
L VSNIP+ FR +LK +F EK G V+ VE++ ++ G ++G G V + ++A +
Sbjct: 155 LHVSNIPFRFRDPDLKTMF-EKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAERARQEL 212
Query: 348 HRYELNGRKLVLKEETGNERRMHTSR 425
H + GRK+ + T R+H+ +
Sbjct: 213 HGSMIEGRKIEVNCATA---RVHSKK 235
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 44.0 bits (99), Expect = 9e-05
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
+FV NI + ++ + E G+VA + + +GK +G G FT+ E +AL ++
Sbjct: 49 VFVGNISDKCSDEFIRKILNE-CGNVASWKRIKGSNGKLQGFGFCHFTDLEGTLRALRIL 107
Query: 348 HRYELNGRKLVLK--EETGNERRMHTSRPQHREGR 446
H + L +KL +K E+ ++ R + + R+G+
Sbjct: 108 HEFHLGDKKLTVKPDEKVRDDLRKNAIENRKRQGK 142
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 44.0 bits (99), Expect = 9e-05
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
+FV NI + ++ + E G+VA + + +GK +G G FT+ E +AL ++
Sbjct: 49 VFVGNISDKCSDEFIRKILNE-CGNVASWKRIKGSNGKLQGFGFCHFTDLEGTLRALRIL 107
Query: 348 HRYELNGRKLVLK--EETGNERRMHTSRPQHREGR 446
H + L +KL +K E+ ++ R + + R+G+
Sbjct: 108 HEFHLGDKKLTVKPDEKVRDDLRKNAIENRKRQGK 142
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 44.0 bits (99), Expect = 9e-05
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKALFV 344
+FV N+P+E L F ++G V V ++ D D+GK +G V F ++ AL
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL-S 306
Query: 345 MHRYELNGRKLVLKE--ETGNERRMHTSRPQHREGRNNRDD 461
M ++ R L + + + G+ ++ T++ + G+ N+++
Sbjct: 307 METIKMEKRDLRITKVMKKGHLTKIQTAKKRTSHGKKNQNE 347
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
L VS++P + EL +F +K ++ G ++G G V F N + AL M
Sbjct: 158 LHVSSVPDDMADAELYRIF-DKYQSCRGAKMFRFVDGSSKGSGFVRFGNQTDQQMALVEM 216
Query: 348 HRYELNGRKLVLK-EETGNERRMHTSRPQHREGRNN--RDDKDNWGINKPREPENLNTY 515
HR ++ G +++LK + ER Q + RN+ RD+K N P+ Y
Sbjct: 217 HRTKVGGCRIILKLAGSRGERLDRGESRQFKSQRNDRRRDEKSGQYRNGTAVPQQTQVY 275
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/86 (31%), Positives = 48/86 (55%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
L VSNIP+++R +L +F EKVG V VE++ ++ G ++G G V N + +A
Sbjct: 102 LHVSNIPFKYREPDLTAMF-EKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEF 159
Query: 348 HRYELNGRKLVLKEETGNERRMHTSR 425
+ + GR++ + T +R+H +
Sbjct: 160 NGTTIEGRRVEVNLAT---QRVHNKK 182
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/86 (31%), Positives = 48/86 (55%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
L VSNIP+++R +L +F EKVG V VE++ ++ G ++G G V N + +A
Sbjct: 102 LHVSNIPFKYREPDLTAMF-EKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEF 159
Query: 348 HRYELNGRKLVLKEETGNERRMHTSR 425
+ + GR++ + T +R+H +
Sbjct: 160 NGTTIEGRRVEVNLAT---QRVHNKK 182
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKALFV 344
++V N P++ +L + F + G+V+ V ++ D ++G+ RG VEFT A ++A+
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQ-AGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 345 MHRYELNGRKL 377
+ + NGR L
Sbjct: 65 FNGVDFNGRAL 75
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 41.5 bits (93), Expect = 5e-04
Identities = 27/98 (27%), Positives = 48/98 (48%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
++V N+P + R E++D+F K G + YV++ SG+ VEF + + A+
Sbjct: 11 VYVGNLPGDVREKEVEDIF-HKYGRIKYVDI---KSGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 348 HRYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRDD 461
YE +GR++ ++ G R + RP G + D
Sbjct: 67 DGYEFDGRRIRVEFTRGVGPRGPSGRPLQDGGDHRGGD 104
Score = 34.7 bits (76), Expect = 0.058
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKAL 338
+ V +P W +LKD ++ GDV Y ++ D G G+VEFT E +K A+
Sbjct: 125 VIVEGLPPTGSWQDLKDHMRD-AGDVCYADVARD------GTGVVEFTRYEDVKYAV 174
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKALFV 344
++V N P++ EL + F +G + V ++ D ++G+ RG +EF + ++A+
Sbjct: 7 VYVGNAPFQTTEEELGNFFSS-IGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 345 MHRYELNGRKL 377
M+ E NGR L
Sbjct: 66 MNGAEFNGRPL 76
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/98 (27%), Positives = 47/98 (47%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
++V N+P + R E++D+F K G + YV++ SG+ VEF + + A+
Sbjct: 11 VYVGNLPGDVREKEVEDIF-HKYGRIKYVDI---KSGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 348 HRYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRDD 461
YE +GR++ ++ G R RP G + D
Sbjct: 67 DGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGD 104
Score = 34.7 bits (76), Expect = 0.058
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKAL 338
+ V +P W +LKD ++ GDV Y ++ D G G+VEFT E +K A+
Sbjct: 125 VIVEGLPPTGSWQDLKDHMRD-AGDVCYADVARD------GTGVVEFTRYEDVKYAV 174
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKALFV 344
++V N+PY+ E+ + F VG V V ++ D ++G+ RG VEF+ ++A+
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAA-VGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 345 MHRYELNGRKL 377
++ NGR L
Sbjct: 67 LNGVAFNGRNL 77
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
LF+ + + L+++F K G + +L D GK+RGC V FTN A M
Sbjct: 144 LFIGQLSKKHNEENLREIFA-KFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 348 H 350
H
Sbjct: 203 H 203
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
LF+ + + L+++F K G + +L D GK+RGC V FTN A M
Sbjct: 144 LFIGQLSKKHNEENLREIFA-KFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 348 H 350
H
Sbjct: 203 H 203
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
LF+ + + L+++F K G + +L D GK+RGC V FTN A M
Sbjct: 144 LFIGQLSKKHNEENLREIFA-KFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 348 H 350
H
Sbjct: 203 H 203
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
LF+ + + L+++F K G + +L D GK+RGC V FTN A M
Sbjct: 144 LFIGQLSKKHNEENLREIFA-KFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 348 H 350
H
Sbjct: 203 H 203
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
LF+ + + L+++F K G + +L D GK+RGC V FTN A M
Sbjct: 144 LFIGQLSKKHNEENLREIFA-KFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 348 H 350
H
Sbjct: 203 H 203
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
LF+ + + L+++F K G + +L D GK+RGC V FTN A M
Sbjct: 144 LFIGQLSKKHNEENLREIFA-KFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 348 H 350
H
Sbjct: 203 H 203
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 38.7 bits (86), Expect = 0.004
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 5/127 (3%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
++V N + L+ LF K G++ E++T + GK++G G V F N E + A+ +
Sbjct: 155 VYVKNFGDHYNKETLEKLFA-KFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQAL 212
Query: 348 HRYELNGRKL---VLKEETGNERRMHTSRPQHREGRNNRDDKDNWGIN--KPREPENLNT 512
H + G L V + + +ER + +H + + R K G+N E ++
Sbjct: 213 HDSTIEGTDLKLHVCRAQKKSERHAELKK-KHEQHKAERMQKYQ-GVNLYVKNLDETVDD 270
Query: 513 YGLSLQF 533
GL QF
Sbjct: 271 DGLKKQF 277
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 38.7 bits (86), Expect = 0.004
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 5/127 (3%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
++V N + L+ LF K G++ E++T + GK++G G V F N E + A+ +
Sbjct: 152 VYVKNFGDHYNKETLEKLFA-KFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQAL 209
Query: 348 HRYELNGRKL---VLKEETGNERRMHTSRPQHREGRNNRDDKDNWGIN--KPREPENLNT 512
H + G L V + + +ER + +H + + R K G+N E ++
Sbjct: 210 HDSTIEGTDLKLHVCRAQKKSERHAELKK-KHEQHKAERMQKYQ-GVNLYVKNLDETVDD 267
Query: 513 YGLSLQF 533
GL QF
Sbjct: 268 DGLKKQF 274
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 38.7 bits (86), Expect = 0.004
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 5/127 (3%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
++V N + L+ LF K G++ E++T + GK++G G V F N E + A+ +
Sbjct: 215 VYVKNFGDHYNKETLEKLFA-KFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQAL 272
Query: 348 HRYELNGRKL---VLKEETGNERRMHTSRPQHREGRNNRDDKDNWGIN--KPREPENLNT 512
H + G L V + + +ER + +H + + R K G+N E ++
Sbjct: 273 HDSTIEGTDLKLHVCRAQKKSERHAELKK-KHEQHKAERMQKYQ-GVNLYVKNLDETVDD 330
Query: 513 YGLSLQF 533
GL QF
Sbjct: 331 DGLKKQF 337
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/90 (26%), Positives = 45/90 (50%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
L + N+ + W ++KD ++ + Y E + +A IV FT+ + ++ A+ +
Sbjct: 114 LVIDNLSTRYSWQDIKDHIRKLGIEPTYSEAHKRNVNQA----IVCFTSHDDLRDAMNKL 169
Query: 348 HRYELNGRKLVLKEETGNERRMHTSRPQHR 437
+LNGRKL +ET + R + R + R
Sbjct: 170 QGEDLNGRKLKCTDETRDRSRSRSPRRRSR 199
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 37.5 bits (83), Expect = 0.008
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 5/127 (3%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 347
++V N + L+ +F K G++ E++T + GK++G G V F N E + A+ +
Sbjct: 215 VYVKNFGDHYNKETLEKVFA-KFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQAL 272
Query: 348 HRYELNGRKL---VLKEETGNERRMHTSRPQHREGRNNRDDKDNWGIN--KPREPENLNT 512
H + G L V + + +ER + +H + + R K G+N E ++
Sbjct: 273 HDSTIEGTDLKLHVCRAQKKSERHAELKK-KHEQHKAERMQKYQ-GVNLYVKNLDETVDD 330
Query: 513 YGLSLQF 533
GL QF
Sbjct: 331 DGLKKQF 337
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKALFV 344
+FV I E +L F + G+VA ++ D +G++RG VEFT E K AL
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQ-YGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLAL-A 88
Query: 345 MHRYELNGRKLVLKEETGNERR 410
+ G+ + +K E +
Sbjct: 89 AREQTIKGKSVEVKPAKSRENK 110
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKALFV 344
+FV I E +L F + G+VA ++ D +G++RG VEFT E K AL
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQ-YGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLAL-A 88
Query: 345 MHRYELNGRKLVLKEETGNERR 410
+ G+ + +K E +
Sbjct: 89 AREQTIKGKSVEVKPAKSRENK 110
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 237 GDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKALFVMHRYELNGRKL 377
GDV + + D +SGK RG G VEF E A+ M+ EL G+ +
Sbjct: 35 GDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMNESELFGKTI 82
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 31.5 bits (68), Expect = 0.54
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +3
Query: 174 VSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVMHR 353
V+N+P+ + EL + F EKV D G A + EF++ MK++ + R
Sbjct: 610 VTNVPFRMKDEELLEWFSEKVRPAKLTRTFYSD-GNASDRWVAEFSSESLMKRSFGI--R 666
Query: 354 YELNGRKLVLK 386
GR L L+
Sbjct: 667 TLCTGRTLRLR 677
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 31.1 bits (67), Expect = 0.71
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 174 VSNIPYEFRWTELKDLFKEKVGDVAYVELLTDD-SGKARGCGIVEFTNTEAMKKALFVMH 350
V+N+P E EL+DLF K+G V + + D +G +G V F + + +A+ ++
Sbjct: 180 VTNLPQEMNEDELRDLF-GKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
Query: 351 RYELNGRKLVLKEE 392
++ +VLK E
Sbjct: 239 --DIRMYHMVLKVE 250
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVA 248
LFV N+P E + TELK+LF GD+A
Sbjct: 118 LFVGNLPNEVKETELKELFSPH-GDIA 143
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVA 248
LFV N+P E + TELK+LF GD+A
Sbjct: 118 LFVGNLPNEVKETELKELFSPH-GDIA 143
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVA 248
LFV N+P E + TELK+LF GD+A
Sbjct: 118 LFVGNLPNEVKETELKELFSPH-GDIA 143
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 30.7 bits (66), Expect = 0.94
Identities = 21/95 (22%), Positives = 40/95 (42%)
Frame = +3
Query: 174 VSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVMHR 353
V N+ W +LKD + + + Y E + K ++ F +K+ +
Sbjct: 133 VENLSSRISWQDLKDQVRRQGVEPTYAE-----AHKRPNEALLCFATPSDLKRCIEKCDG 187
Query: 354 YELNGRKLVLKEETGNERRMHTSRPQHREGRNNRD 458
+LNGRK+ + +++ R S + R +RD
Sbjct: 188 MDLNGRKIKMIDDSQAGRSRSRSNSRSRSRSRSRD 222
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKA 335
+FV +PY L + F E+ GD+ ++TD ++ K+RG G V + + ++A
Sbjct: 37 IFVGGLPYHTSDKTLHEYF-EQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERA 92
>AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical
protein C50D2.8 protein.
Length = 319
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 351 RYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRDDKDN 470
R E ++ + ERR H SR HR ++RD +D+
Sbjct: 257 RKERREKRAEAATTSDTERRRHRSRSPHRSSHDSRDSRDS 296
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 207 ELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKAL-FVMHRYELNGRKLVL 383
+L D F + GD+ + +LT+ +GC +EFT EA ++A ++ + G++L +
Sbjct: 254 DLNDFFYQ-YGDIRCLRVLTE-----KGCAFIEFTTREAAERAAERSFNKTFIKGKRLTI 307
Query: 384 K 386
+
Sbjct: 308 R 308
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +3
Query: 567 KKVFVANLDYKADQAKIKEVFKMAGKV 647
+ V+V N+D+K+ ++I+E F + GKV
Sbjct: 46 RSVYVGNVDWKSTVSEIEEHFAVCGKV 72
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 28.3 bits (60), Expect = 5.0
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKAL--- 338
++V N+P E+ +LF G+V Y + + VEF+ ++ AL
Sbjct: 165 VYVGNLPKGVDGNEVLELFNMYFGEVMYARMASGPDALPCAYAYVEFSQQASVCNALQND 224
Query: 339 -FVMHRYEL---NGRKLVLKEET-GNERRMHTSRPQHREGRNNRDDKDNWGINKPR 491
F L + R ++K + +E+ + R GRN DD+D PR
Sbjct: 225 GFEFKERPLKIQHSRVAIIKPQAKTDEQALGEIEEAIRMGRNG-DDRDRRRSRSPR 279
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 28.3 bits (60), Expect = 5.0
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Frame = +3
Query: 168 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKAL--- 338
++V N+P E+ +LF G+V Y + + VEF+ ++ AL
Sbjct: 165 VYVGNLPKGVDGNEVLELFNMYFGEVMYARMASGPDALPCAYAYVEFSQQASVCNALQND 224
Query: 339 -FVMHRYEL---NGRKLVLKEET-GNERRMHTSRPQHREGRNNRDDKDNWGINKPR 491
F L + R ++K + +E+ + R GRN DD+D PR
Sbjct: 225 GFEFKERPLKIQHSRVAIIKPQAKTDEQALGEIEEAIRMGRNG-DDRDRRRSRSPR 279
>Z83116-6|CAB05565.2| 302|Caenorhabditis elegans Hypothetical
protein M01B2.7 protein.
Length = 302
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 216 LSVPSNEIRMVCLIQISACSRCDLGLTT 133
+++ SN++R +C I I C CDL L T
Sbjct: 29 VTLHSNKLRSICNILICVCCFCDLLLFT 56
>Z81579-5|CAB04654.3| 1305|Caenorhabditis elegans Hypothetical
protein R13H4.1 protein.
Length = 1305
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +3
Query: 327 KKALFVMHRYELNGRKL---VLKEETGNERRMHTSRPQHREGRNNRDDKDNWGINKPREP 497
K +FV ++ NGR + + R+ T R G++ R ++ + I PR P
Sbjct: 411 KLEIFVDFKFYENGRSVHNTPTSRRAADSARVQTGRSGDN-GQSARSNRKSVKIETPRSP 469
Query: 498 ENLNTY 515
EN N +
Sbjct: 470 ENSNRF 475
>Z81132-11|CAB03426.2| 302|Caenorhabditis elegans Hypothetical
protein T26E4.15 protein.
Length = 302
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 216 LSVPSNEIRMVCLIQISACSRCDLGLTT 133
+++ SN++R +C I I C CDL L T
Sbjct: 29 VTLHSNKLRSICNILICVCCFCDLLLFT 56
>AY959881-1|AAX56914.1| 1305|Caenorhabditis elegans
nephrocystin-4-like protein protein.
Length = 1305
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +3
Query: 327 KKALFVMHRYELNGRKL---VLKEETGNERRMHTSRPQHREGRNNRDDKDNWGINKPREP 497
K +FV ++ NGR + + R+ T R G++ R ++ + I PR P
Sbjct: 411 KLEIFVDFKFYENGRSVHNTPTSRRAADSARVQTGRSGDN-GQSARSNRKSVKIETPRSP 469
Query: 498 ENLNTY 515
EN N +
Sbjct: 470 ENSNRF 475
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 555 PPLVKKVFVANLDYKADQAKIKEVFKMAGKV 647
PP + ++VAN + D+ ++E+F AG V
Sbjct: 9 PPEERTIYVANFSEEVDEELLEELFIQAGPV 39
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/76 (27%), Positives = 31/76 (40%)
Frame = +3
Query: 279 KARGCGIVEFTNTEAMKKALFVMHRYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRD 458
K R I EA +AL R + +K E ERR H R + E R
Sbjct: 267 KDRSDHIERHRQAEARAEALEKEKREQEEKQKKENLERVEKERREHIERHRQAEARAKAL 326
Query: 459 DKDNWGINKPREPENL 506
+K+ + + ++ ENL
Sbjct: 327 EKEKRELEEKQKKENL 342
>Z70755-7|CAA94787.1| 281|Caenorhabditis elegans Hypothetical
protein K06A4.5 protein.
Length = 281
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 171 FVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAM 326
F N PYE RWT+L K + Y + +G R G E+ TE M
Sbjct: 166 FACNAPYEARWTDLPVPINRK--EFIYDHISEVKNGPVRIYGAPEY-KTEVM 214
>Z70751-2|CAA94753.1| 281|Caenorhabditis elegans Hypothetical
protein K06A4.5 protein.
Length = 281
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 171 FVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAM 326
F N PYE RWT+L K + Y + +G R G E+ TE M
Sbjct: 166 FACNAPYEARWTDLPVPINRK--EFIYDHISEVKNGPVRIYGAPEY-KTEVM 214
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,349,876
Number of Sequences: 27780
Number of extensions: 256415
Number of successful extensions: 880
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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