Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_P02
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78200-1|CAB01579.1|  377|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z81127-9|CAB03394.3|  735|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z81056-11|CAB02911.3|  735|Caenorhabditis elegans Hypothetical p...    29   2.9  
Z83123-5|CAB05611.1|  332|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z29116-4|CAA82370.2|  206|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>Z78200-1|CAB01579.1|  377|Caenorhabditis elegans Hypothetical
           protein T04H1.1 protein.
          Length = 377

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = +2

Query: 365 IFEFMINRTDFVINPGEVKKVQF-----YVEYKVTMAPPKVKYILFN 490
           + +F I +T F+I+     ++ F     Y+  KVT   P+ K ++FN
Sbjct: 197 VLKFTIEQTGFIISITNFAQIPFKLLAAYISDKVTFISPRTKMLIFN 243


>Z81127-9|CAB03394.3|  735|Caenorhabditis elegans Hypothetical
           protein F09F3.9 protein.
          Length = 735

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
 Frame = +2

Query: 233 HPGRWYGVIKLSSD---YTIHSLWLRV----HFDNHTIAFKNCLGSVTQENIFEFMINRT 391
           H G WY V     +   Y++ +L   V    H  +    F + +GS+T +   E+ INR 
Sbjct: 303 HKGTWYKVDTFDRNGKLYSVDNLAKIVSEIMHRQDKADGFLSKIGSLTTDRRTEWSINRE 362

Query: 392 DFVINPGEVKKVQFYVE 442
            F +N    KK+   +E
Sbjct: 363 KFFLNNKNNKKLLEIIE 379


>Z81056-11|CAB02911.3|  735|Caenorhabditis elegans Hypothetical
           protein F09F3.9 protein.
          Length = 735

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
 Frame = +2

Query: 233 HPGRWYGVIKLSSD---YTIHSLWLRV----HFDNHTIAFKNCLGSVTQENIFEFMINRT 391
           H G WY V     +   Y++ +L   V    H  +    F + +GS+T +   E+ INR 
Sbjct: 303 HKGTWYKVDTFDRNGKLYSVDNLAKIVSEIMHRQDKADGFLSKIGSLTTDRRTEWSINRE 362

Query: 392 DFVINPGEVKKVQFYVE 442
            F +N    KK+   +E
Sbjct: 363 KFFLNNKNNKKLLEIIE 379


>Z83123-5|CAB05611.1|  332|Caenorhabditis elegans Hypothetical
           protein T04A11.8 protein.
          Length = 332

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -1

Query: 420 FTSPGLITKSVLLIINSNMFSCVTLPKQFLNAIVWLSKCTLNHNEWIV 277
           FT    ++ S  + I         + + FLN ++W  K  +NH+ +IV
Sbjct: 24  FTIESFLSFSPFIYIIPTFVIIFRIFRIFLNTVLWKKKSPINHSVFIV 71


>Z29116-4|CAA82370.2|  206|Caenorhabditis elegans Hypothetical
           protein ZK507.4 protein.
          Length = 206

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +3

Query: 105 CYINCEL--YPXHCCSYCWCQLKRSRSPRWC 191
           C  NC +  +P HC   C C+ +  R  +WC
Sbjct: 130 CRPNCNVSVHP-HCTRQCKCEYEYHRMQKWC 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,380,245
Number of Sequences: 27780
Number of extensions: 330126
Number of successful extensions: 707
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)