Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_O21
(548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82901-1|CAI42864.2| 1593|Homo sapiens THO complex 2 protein. 68 3e-11
AL030996-3|CAI42271.2| 1593|Homo sapiens THO complex 2 protein. 68 3e-11
AL023575-1|CAO03594.1| 1593|Homo sapiens THO complex 2 protein. 68 3e-11
BX004807-3|CAI15774.1| 629|Homo sapiens novel protein protein. 31 3.5
BC015814-1|AAH15814.1| 629|Homo sapiens KIAA1799 protein protein. 31 3.5
AL109925-2|CAB92087.1| 629|Homo sapiens novel protein protein. 31 3.5
AB058702-1|BAB47428.1| 610|Homo sapiens KIAA1799 protein protein. 31 3.5
>Z82901-1|CAI42864.2| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 67.7 bits (158), Expect = 3e-11
Identities = 40/135 (29%), Positives = 66/135 (48%)
Frame = +2
Query: 110 SDYCKNWDKSGRELFLKHLTQFTKDEHRTPLFSKSGKMSGFSQSVYDFLLCGLKGNLKKD 289
+++ KNW+KSGR FL HL + + S F Q++Y+ +KGNLK +
Sbjct: 10 AEWIKNWEKSGRGEFL-HLCRILSENKS----HDSSTYRDFQQALYELSYHVIKGNLKHE 64
Query: 290 TVLSFLREITNLHADVPXXXXXXXXXXXAETSLDVQSDERAYFCYIVRELEPFISDKLLK 469
+ L +I+ D+P ET+ + +R YF +V +SD +LK
Sbjct: 65 QASNVLSDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSDTVLK 124
Query: 470 ERLEIDTLQDAGTLR 514
ERL+ +TL+ G ++
Sbjct: 125 ERLDPETLESLGLIK 139
>AL030996-3|CAI42271.2| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 67.7 bits (158), Expect = 3e-11
Identities = 40/135 (29%), Positives = 66/135 (48%)
Frame = +2
Query: 110 SDYCKNWDKSGRELFLKHLTQFTKDEHRTPLFSKSGKMSGFSQSVYDFLLCGLKGNLKKD 289
+++ KNW+KSGR FL HL + + S F Q++Y+ +KGNLK +
Sbjct: 10 AEWIKNWEKSGRGEFL-HLCRILSENKS----HDSSTYRDFQQALYELSYHVIKGNLKHE 64
Query: 290 TVLSFLREITNLHADVPXXXXXXXXXXXAETSLDVQSDERAYFCYIVRELEPFISDKLLK 469
+ L +I+ D+P ET+ + +R YF +V +SD +LK
Sbjct: 65 QASNVLSDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSDTVLK 124
Query: 470 ERLEIDTLQDAGTLR 514
ERL+ +TL+ G ++
Sbjct: 125 ERLDPETLESLGLIK 139
>AL023575-1|CAO03594.1| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 67.7 bits (158), Expect = 3e-11
Identities = 40/135 (29%), Positives = 66/135 (48%)
Frame = +2
Query: 110 SDYCKNWDKSGRELFLKHLTQFTKDEHRTPLFSKSGKMSGFSQSVYDFLLCGLKGNLKKD 289
+++ KNW+KSGR FL HL + + S F Q++Y+ +KGNLK +
Sbjct: 10 AEWIKNWEKSGRGEFL-HLCRILSENKS----HDSSTYRDFQQALYELSYHVIKGNLKHE 64
Query: 290 TVLSFLREITNLHADVPXXXXXXXXXXXAETSLDVQSDERAYFCYIVRELEPFISDKLLK 469
+ L +I+ D+P ET+ + +R YF +V +SD +LK
Sbjct: 65 QASNVLSDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSDTVLK 124
Query: 470 ERLEIDTLQDAGTLR 514
ERL+ +TL+ G ++
Sbjct: 125 ERLDPETLESLGLIK 139
>BX004807-3|CAI15774.1| 629|Homo sapiens novel protein protein.
Length = 629
Score = 30.7 bits (66), Expect = 3.5
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 416 FCYIVRELEPFISDKLLKERLEIDTLQDAGTLRTKLYXILSQ 541
FC I+R+ +P +LLK ++D D L T LY L++
Sbjct: 92 FCIILRKEKPTSKAELLKSFKQLDVNDDGCILHTDLYKFLTK 133
>BC015814-1|AAH15814.1| 629|Homo sapiens KIAA1799 protein protein.
Length = 629
Score = 30.7 bits (66), Expect = 3.5
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 416 FCYIVRELEPFISDKLLKERLEIDTLQDAGTLRTKLYXILSQ 541
FC I+R+ +P +LLK ++D D L T LY L++
Sbjct: 92 FCIILRKEKPTSKAELLKSFKQLDVNDDGCILHTDLYKFLTK 133
>AL109925-2|CAB92087.1| 629|Homo sapiens novel protein protein.
Length = 629
Score = 30.7 bits (66), Expect = 3.5
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 416 FCYIVRELEPFISDKLLKERLEIDTLQDAGTLRTKLYXILSQ 541
FC I+R+ +P +LLK ++D D L T LY L++
Sbjct: 92 FCIILRKEKPTSKAELLKSFKQLDVNDDGCILHTDLYKFLTK 133
>AB058702-1|BAB47428.1| 610|Homo sapiens KIAA1799 protein protein.
Length = 610
Score = 30.7 bits (66), Expect = 3.5
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 416 FCYIVRELEPFISDKLLKERLEIDTLQDAGTLRTKLYXILSQ 541
FC I+R+ +P +LLK ++D D L T LY L++
Sbjct: 96 FCIILRKEKPTSKAELLKSFKQLDVNDDGCILHTDLYKFLTK 137
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,222,562
Number of Sequences: 237096
Number of extensions: 1394039
Number of successful extensions: 2103
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2100
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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