Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_O10
         (560 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0697 + 26888791-26888861,26890468-26890579,26891561-268917...    28   5.9  
01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480     28   5.9  
06_03_1313 - 29252335-29252446,29253430-29253671,29253770-292538...    27   7.7  

>03_05_0697 + 26888791-26888861,26890468-26890579,26891561-26891757,
            26892215-26892266,26893530-26893795,26894007-26894229,
            26895154-26895327,26895408-26895485,26895566-26895817,
            26896138-26898204,26899477-26901322,26901474-26901574,
            26902179-26902535,26902681-26902799,26903558-26903559,
            26903630-26903662,26903709-26903841,26904285-26904537,
            26905688-26905912,26906401-26906466,26907373-26907471,
            26908528-26908545,26908546-26908893,26909878-26910354
          Length = 2522

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 314  QSLTGSTKKRSISLTFRRTPLYVPAIYV-RTINI 216
            Q  T   K+ S+ L +R   LY P +Y+ R IN+
Sbjct: 1545 QKYTFDCKRESLDLVYRGLDLYKPEVYIMRDINL 1578


>01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480
          Length = 623

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 185 CRCCLEYGY-LKYLWSEHKWQGHTEVYGEMLTKCYAFSWIQLDSEDYN 325
           C+C ++  + +  LW    WQ  T    +  TK   +SW+ L+S+  N
Sbjct: 457 CKCKIKGSHTIVGLWKHEYWQP-TMKTSDWYTKSCTYSWVSLNSKLIN 503


>06_03_1313 - 29252335-29252446,29253430-29253671,29253770-29253848,
            29254991-29255130,29255262-29255571,29255810-29255952,
            29256106-29256306,29256453-29256581,29256921-29257199,
            29258036-29259720,29261255-29261764,29261901-29262108,
            29264347-29264458,29264594-29264763
          Length = 1439

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +2

Query: 245  GHTEVYGEM-LTKCYAFSWIQLDSEDYNQICDPCIKRLRESCSFRNLVIRS-QKQLMDEI 418
            G+ E Y +   T CY ++   +  EDY   C P I++  +S   R   +   QK + + I
Sbjct: 1100 GYLEYYKQRGFTSCYIWACPPVKGEDYILYCHPEIQKTPKSDKLRQWYLSMLQKAIKENI 1159


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,524,238
Number of Sequences: 37544
Number of extensions: 221503
Number of successful extensions: 511
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)