Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_O07
(586 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 222 2e-58
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 221 4e-58
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 218 3e-57
08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378 31 0.51
04_04_0040 + 22322839-22324173 31 0.68
07_03_1757 + 29250163-29250349,29250612-29250813,29250898-292510... 30 1.6
12_02_0735 - 22636835-22639502,22639755-22640734 29 2.1
06_01_0083 - 659510-661267,661577-662384,662700-663646 29 2.7
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 3.6
05_02_0043 + 5964749-5966406,5966725-5966791,5967174-5967329,596... 28 4.8
04_01_0492 + 6476586-6476873,6477414-6477686,6477769-6477948,647... 28 4.8
11_01_0732 + 6065852-6066531,6067066-6067141,6067231-6067357,606... 28 6.3
08_02_0757 + 20840885-20841281,20842937-20843025,20843132-208432... 28 6.3
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120... 28 6.3
12_02_1212 - 27043723-27044241,27044483-27044850,27045513-27045753 27 8.3
12_02_0759 - 22882435-22882731 27 8.3
06_03_1011 - 26882011-26882157,26882576-26884248,26884607-268847... 27 8.3
04_04_0946 - 29579779-29580004,29580098-29580210 27 8.3
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 222 bits (542), Expect = 2e-58
Identities = 98/159 (61%), Positives = 126/159 (79%)
Frame = -2
Query: 585 RLIXDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 406
RL+ D KGRF + + E+AK+KLCKV+ V G K +PYL T+DGRTIRYPDPLIK ND+
Sbjct: 100 RLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDT 159
Query: 405 IQLDIATTKIMDFIKFEXGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFA 226
I++D+ T KI+DFIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +H++D+ GH FA
Sbjct: 160 IKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHAFA 219
Query: 225 TRLNNVFIIGKGTKAYXSLPRGKGIRLTIAEERDKRIAA 109
TRL NVF IGKG K + SLP+GKGI+L+I EE+ KR AA
Sbjct: 220 TRLGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRDAA 258
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 221 bits (539), Expect = 4e-58
Identities = 97/159 (61%), Positives = 126/159 (79%)
Frame = -2
Query: 585 RLIXDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 406
RL+ D KGRF + + E+AK+KLCKV+ V G K +PYL T+DGRTIRYPDP+IK ND+
Sbjct: 100 RLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDT 159
Query: 405 IQLDIATTKIMDFIKFEXGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFA 226
I++D+ T KI+DFIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +H++D+ GH FA
Sbjct: 160 IKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHQFA 219
Query: 225 TRLNNVFIIGKGTKAYXSLPRGKGIRLTIAEERDKRIAA 109
TRL NVF IGKG K + SLP+GKGI+L+I EE+ KR AA
Sbjct: 220 TRLGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRDAA 258
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 218 bits (532), Expect = 3e-57
Identities = 97/158 (61%), Positives = 124/158 (78%)
Frame = -2
Query: 585 RLIXDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 406
RL+ D KGRF +H I E+AK+KLCKV+ V G K +P+L T+DGRTIRYPDPLIK ND+
Sbjct: 116 RLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDT 175
Query: 405 IQLDIATTKIMDFIKFEXGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFA 226
I++D+ T KI+DFIKF+ GN+ M+TGGRN GRVG I SRE+H GSF+ +H++D+ GH FA
Sbjct: 176 IKIDLETNKIVDFIKFDVGNIVMVTGGRNTGRVGVIKSREKHKGSFETIHVEDALGHQFA 235
Query: 225 TRLNNVFIIGKGTKAYXSLPRGKGIRLTIAEERDKRIA 112
TR+ NVF IGK K + SLP+GKGI+L+I EE KR A
Sbjct: 236 TRMGNVFTIGKERKPWVSLPKGKGIKLSIIEEARKRNA 273
>08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378
Length = 477
Score = 31.5 bits (68), Expect = 0.51
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = -1
Query: 292 PRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHXAAARQG--HPPHHRRGAGQA 119
P +RL RH G HG R + E + GH H G P HH RG GQA
Sbjct: 15 PEAHARLPRHAPPAGGHGRGGRGQ-EGPIAIAAGHGRGHRGGGHGGPASPRHHLRGRGQA 73
>04_04_0040 + 22322839-22324173
Length = 444
Score = 31.1 bits (67), Expect = 0.68
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = -1
Query: 283 TSRL--LR-HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHXAAARQGHPPHHRRGAG 125
TSRL LR H H HG + RH++ +R R H A G P + AG
Sbjct: 25 TSRLKGLRVHLTHVDAHGNYSRHQLLRRAARRSHHRMSRLVARATGVPMTSSKAAG 80
>07_03_1757 +
29250163-29250349,29250612-29250813,29250898-29251008,
29251112-29251160,29251247-29251353,29251439-29251942,
29252486-29252614,29252865-29253161,29253274-29253720,
29253828-29253893,29254109-29254169,29254314-29254463,
29254555-29254689,29254791-29254818,29255430-29255479
Length = 840
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 203 MNTLFNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLR 325
+N +F L V L+CT+ GC + +VP P++R
Sbjct: 213 LNAIFELFVWVNDSTVLVCTIPSSRGCPPKKPLVPFGPRIR 253
>12_02_0735 - 22636835-22639502,22639755-22640734
Length = 1215
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 191 PLPIMNTLFNLVAKVCPVESLMCTMSKEPGCL 286
PL NT+ +++A PVE L C +S + G L
Sbjct: 425 PLVTANTILSILAADYPVEKLACYLSDDGGAL 456
>06_01_0083 - 659510-661267,661577-662384,662700-663646
Length = 1170
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 191 PLPIMNTLFNLVAKVCPVESLMCTMSKEPGCL 286
PL NT+ +++A PVE L C +S + G L
Sbjct: 414 PLVTANTILSILAADYPVEKLSCYVSDDGGAL 445
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -3
Query: 305 APSCPARDI--PAPSTLCTSRTPRDTPSP 225
AP P+ D PAP T T +P TPSP
Sbjct: 70 APDAPSGDFFPPAPPTTTTPTSPGTTPSP 98
>05_02_0043 +
5964749-5966406,5966725-5966791,5967174-5967329,
5967782-5967865,5968020-5968073
Length = 672
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/64 (25%), Positives = 24/64 (37%)
Frame = -1
Query: 301 HRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHXAAARQGHPPHHRRGAGQ 122
H R + H H G H H +H E + +++ GH P+ R A Q
Sbjct: 313 HMYVRPSPNQDEHHGHTGHHIRHFLQLGWDYLHLTYKQEAANLGSSQNGHFPYRWRRASQ 372
Query: 121 AHRS 110
H +
Sbjct: 373 YHEA 376
>04_01_0492 +
6476586-6476873,6477414-6477686,6477769-6477948,
6478436-6478696,6479171-6479303,6479404-6479494,
6479921-6480023,6480557-6480660,6480809-6480902,
6480985-6481140,6481224-6481286,6481388-6481453,
6481670-6481870,6481999-6482076,6482165-6482284,
6482382-6482462,6482548-6482633,6482920-6483031,
6483093-6483170,6483306-6483482
Length = 914
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1
Query: 169 AARQGHPPHHRRGAG 125
AAR+GHPP H G G
Sbjct: 4 AARRGHPPPHENGVG 18
>11_01_0732 +
6065852-6066531,6067066-6067141,6067231-6067357,
6068084-6068289
Length = 362
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -1
Query: 190 HEGVHXAAARQGHPPHHRRGAGQAHRSQ 107
+ G H AR PHHR G G H +
Sbjct: 28 YAGDHGPIARPQGAPHHRHGHGHGHHQR 55
>08_02_0757 +
20840885-20841281,20842937-20843025,20843132-20843257,
20843617-20844333,20844420-20844630,20844739-20845238,
20845998-20846023,20846393-20846531,20846579-20846660,
20846990-20847153
Length = 816
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 302 VPTRPKLRPPVIIHKFPXSNLMKSIIFVVAMSNWMESLTLISGSG*RM 445
+P RP +RP + K P S SI+ S W E + L G+ R+
Sbjct: 461 IPERPMVRPYHVHSKDPCSFDAGSIVDAWWNSGWWEGIVLQQGNDRRL 508
>07_01_0172 -
1201595-1201912,1202637-1202723,1202836-1202895,
1203007-1203106,1203227-1203633,1204728-1204883,
1204981-1205106,1205503-1205572,1205679-1205767
Length = 470
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 228 RRCVPWSP*CA--QCRRSRDVSRGTRWCPHAPSY 323
+RC+P S A +CR+SR S+ W P+ S+
Sbjct: 423 QRCLPESLRAAVQRCRQSRPASKVVEWAPYRHSF 456
>12_02_1212 - 27043723-27044241,27044483-27044850,27045513-27045753
Length = 375
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1
Query: 232 LRHEVEQRVHNRQGHEGVHXAAARQGHPPHHRR 134
+ HE+ Q +H+ Q + + GH HHRR
Sbjct: 234 ISHEL-QHIHHHQQQQFYYHEVVHDGHGHHHRR 265
>12_02_0759 - 22882435-22882731
Length = 98
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -1
Query: 238 THLRHEVEQRVHNRQGHEGVHXAAA-RQGHPPHHRRGAGQAHRSQG 104
TH RH + +R R+G G A R P H G G+ R +G
Sbjct: 42 THERHHLVERGQRRRGDRGAGVLGADRVEEGPQH--GGGERRRGRG 85
>06_03_1011 -
26882011-26882157,26882576-26884248,26884607-26884783,
26885313-26885416,26885896-26886032
Length = 745
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = -2
Query: 462 THDGRTIRYPDPLIKVNDSI-QLDIA---TTKIMDFIKFEXGNLCMITG 328
+HD + + PDPL ND I ++ IA T ++D+ + + C + G
Sbjct: 599 SHDDKVVSEPDPLPVHNDKIDEVTIAAIQTCALVDYQQSQQNKPCSVNG 647
>04_04_0946 - 29579779-29580004,29580098-29580210
Length = 112
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = -1
Query: 223 EVEQRVHNRQGHEGVHXAAARQGHPPHHRRGAGQAHRSQGRRAV 92
EV++ H R+ H + R+ H HH + Q R A+
Sbjct: 54 EVDRAKHRRKKRAAAHAVSVRKEHRNHHHHHRHHHQQPQPRPAI 97
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,715,758
Number of Sequences: 37544
Number of extensions: 357417
Number of successful extensions: 1283
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1281
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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