Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_N10
         (340 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0802 - 21614891-21615195,21615637-21615823,21615939-216161...   101   1e-22
05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471     99   1e-21
11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528     97   3e-21

>07_03_0802 -
           21614891-21615195,21615637-21615823,21615939-21616154,
           21616669-21616872,21617336-21617569,21617670-21617763,
           21618844-21618890,21619293-21619309,21620183-21620459
          Length = 526

 Score =  101 bits (242), Expect = 1e-22
 Identities = 50/85 (58%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
 Frame = +3

Query: 6   LDPLTVLVENYSS-STCRXEIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYT 182
           +DP+ VLV   ++ +T   +I +IKDFL+ ARRKDA+SV+IK+  + VKFKVRCS++LYT
Sbjct: 15  IDPVVVLVCVVATLATQPKQIHEIKDFLLTARRKDARSVRIKRTKDAVKFKVRCSKYLYT 74

Query: 183 LVITDKEKAEKLKQSLPPGLQVKEV 257
           L + D +KA KLKQSLPPGL V+EV
Sbjct: 75  LCVFDADKANKLKQSLPPGLTVQEV 99


>05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471
          Length = 69

 Score = 98.7 bits (235), Expect = 1e-21
 Identities = 45/66 (68%), Positives = 57/66 (86%)
 Frame = +3

Query: 60  EIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPG 239
           +I +IKDFL+ ARRKDA+SV+IK++ + VKFKVRCSR+LYTL + D +KA KLKQSLPPG
Sbjct: 4   QIHEIKDFLLTARRKDARSVRIKRSKDAVKFKVRCSRYLYTLCVHDTDKANKLKQSLPPG 63

Query: 240 LQVKEV 257
           L V+EV
Sbjct: 64  LTVQEV 69


>11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528
          Length = 69

 Score = 97.1 bits (231), Expect = 3e-21
 Identities = 44/66 (66%), Positives = 56/66 (84%)
 Frame = +3

Query: 60  EIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPG 239
           +I +IKDFL+ ARRKDA+SV+IK+  + VKFKVRCS++LYTL + D +KA KLKQSLPPG
Sbjct: 4   QIHEIKDFLLTARRKDARSVRIKRTKDAVKFKVRCSKYLYTLCVFDADKANKLKQSLPPG 63

Query: 240 LQVKEV 257
           L V+EV
Sbjct: 64  LTVQEV 69


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,531,634
Number of Sequences: 37544
Number of extensions: 101309
Number of successful extensions: 274
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)